RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 ZNF267Q14586 743 aaPredicted RBP11.29□□□□□ -0.6
HLA-DQB3-203ENST00000425319 TBCCQ15814 346 aa11.29□□□□□ -0.6
HLA-DQB3-203ENST00000425319 KCTD19Q17RG1 926 aaPredicted RBP11.29□□□□□ -0.6
HLA-DQB3-203ENST00000425319 FBXL19-AS1Q494R0 122 aa11.29□□□□□ -0.6
HLA-DQB3-203ENST00000425319 PRAMEF20Q5VT98 475 aa11.29□□□□□ -0.6
HLA-DQB3-203ENST00000425319 CYP20A1Q6UW02 462 aa11.29□□□□□ -0.6
HLA-DQB3-203ENST00000425319 PAMR1Q6UXH9 720 aa11.29□□□□□ -0.6
HLA-DQB3-203ENST00000425319 ZC3HC1Q86WB0 502 aaKnown RBP11.29□□□□□ -0.6
HLA-DQB3-203ENST00000425319 P3H2Q8IVL5 708 aa11.29□□□□□ -0.6
HLA-DQB3-203ENST00000425319 LRRC8AQ8IWT6 810 aa11.29□□□□□ -0.6
HLA-DQB3-203ENST00000425319 ST13P4Q8IZP2 240 aaPredicted RBP11.29□□□□□ -0.6
HLA-DQB3-203ENST00000425319 BBOF1Q8ND07 529 aa11.29□□□□□ -0.6
HLA-DQB3-203ENST00000425319 STAG3L4Q8TBR4 150 aa11.29□□□□□ -0.6
HLA-DQB3-203ENST00000425319 RIT1Q92963 219 aa11.29□□□□□ -0.6
HLA-DQB3-203ENST00000425319 FBXL20Q96IG2 436 aa11.29□□□□□ -0.6
HLA-DQB3-203ENST00000425319 CAPZA3Q96KX2 299 aa11.29□□□□□ -0.6
HLA-DQB3-203ENST00000425319 CSF3RQ99062 836 aa11.29□□□□□ -0.6
HLA-DQB3-203ENST00000425319 EPB41L4BQ9H329 900 aa11.29□□□□□ -0.6
HLA-DQB3-203ENST00000425319 ACBD3Q9H3P7 528 aa11.29□□□□□ -0.6
HLA-DQB3-203ENST00000425319 RHOJQ9H4E5 214 aa11.29□□□□□ -0.6
HLA-DQB3-203ENST00000425319 ZNF703Q9H7S9 590 aaPredicted RBP11.29□□□□□ -0.6
HLA-DQB3-203ENST00000425319 DMRT3Q9NQL9 472 aa11.29□□□□□ -0.6
HLA-DQB3-203ENST00000425319 ZNF490Q9ULM2 529 aaPredicted RBP11.29□□□□□ -0.6
HLA-DQB3-203ENST00000425319 PCNX1Q96RV3 2341 aa11.29□□□□□ -0.6
HLA-DQB3-203ENST00000425319 MED13LQ71F56 2210 aa11.28□□□□□ -0.6
HLA-DQB3-203ENST00000425319 A0A0G2JMM0 328 aa11.28□□□□□ -0.6
HLA-DQB3-203ENST00000425319 A0A1W2PPB8 328 aa11.28□□□□□ -0.6
HLA-DQB3-203ENST00000425319 A0A1W2PRS3 328 aa11.28□□□□□ -0.6
HLA-DQB3-203ENST00000425319 KIR3DP1A8MWS1 328 aa11.28□□□□□ -0.6
HLA-DQB3-203ENST00000425319 EEF1E1-BLOC1S5C9J1V9 151 aa11.28□□□□□ -0.6
HLA-DQB3-203ENST00000425319 C4orf51C9J302 202 aa11.28□□□□□ -0.6
HLA-DQB3-203ENST00000425319 TGFBR3LH3BV60 316 aa11.28□□□□□ -0.6
HLA-DQB3-203ENST00000425319 ZSCAN12O43309 604 aa11.28□□□□□ -0.6
HLA-DQB3-203ENST00000425319 EEF1E1O43324 174 aaKnown RBP11.28□□□□□ -0.6
HLA-DQB3-203ENST00000425319 ETHE1O95571 254 aa11.28□□□□□ -0.6
HLA-DQB3-203ENST00000425319 CCDC166P0CW27 439 aa11.28□□□□□ -0.6
HLA-DQB3-203ENST00000425319 PTX3P26022 381 aaPredicted RBP11.28□□□□□ -0.6
HLA-DQB3-203ENST00000425319 CEACAM8P31997 349 aaPredicted RBP11.28□□□□□ -0.6
HLA-DQB3-203ENST00000425319 CPA2P48052 419 aa11.28□□□□□ -0.6
HLA-DQB3-203ENST00000425319 ARFIP1P53367 373 aa11.28□□□□□ -0.6
HLA-DQB3-203ENST00000425319 ID2Q02363 134 aa11.28□□□□□ -0.6
HLA-DQB3-203ENST00000425319 PDIA2Q13087 525 aaKnown RBP11.28□□□□□ -0.6
HLA-DQB3-203ENST00000425319 SNTB1Q13884 538 aaKnown RBP11.28□□□□□ -0.6
HLA-DQB3-203ENST00000425319 SETDB1Q15047 1291 aa11.28□□□□□ -0.6
HLA-DQB3-203ENST00000425319 DEPDC1Q5TB30 811 aa11.28□□□□□ -0.6
HLA-DQB3-203ENST00000425319 KHDRBS2Q5VWX1 349 aaKnown RBP11.28□□□□□ -0.6
HLA-DQB3-203ENST00000425319 NSUN5P2Q63ZY6 315 aa11.28□□□□□ -0.6
HLA-DQB3-203ENST00000425319 ENPP6Q6UWR7 440 aa11.28□□□□□ -0.6
HLA-DQB3-203ENST00000425319 LRRC70Q7Z2Q7 622 aa11.28□□□□□ -0.6
HLA-DQB3-203ENST00000425319 MYLK4Q86YV6 388 aaPredicted RBP11.28□□□□□ -0.6
HLA-DQB3-203ENST00000425319 ZNF321PQ8N8H1 164 aa11.28□□□□□ -0.6
HLA-DQB3-203ENST00000425319 SLCO2A1Q92959 643 aa11.28□□□□□ -0.6
HLA-DQB3-203ENST00000425319 UCN3Q969E3 161 aa11.28□□□□□ -0.6
HLA-DQB3-203ENST00000425319 ISL2Q96A47 359 aa11.28□□□□□ -0.6
HLA-DQB3-203ENST00000425319 TP53INP1Q96A56 240 aa11.28□□□□□ -0.6
HLA-DQB3-203ENST00000425319 ANKRD9Q96BM1 317 aaPredicted RBP11.28□□□□□ -0.6
HLA-DQB3-203ENST00000425319 PPWD1Q96BP3 646 aaKnown RBP11.28□□□□□ -0.6
HLA-DQB3-203ENST00000425319 WDR34Q96EX3 536 aa11.28□□□□□ -0.6
HLA-DQB3-203ENST00000425319 TRIB1Q96RU8 372 aa11.28□□□□□ -0.6
HLA-DQB3-203ENST00000425319 OSBPL9Q96SU4 736 aa11.28□□□□□ -0.6
HLA-DQB3-203ENST00000425319 SECISBP2Q96T21 854 aaKnown RBP11.28□□□□□ -0.6
HLA-DQB3-203ENST00000425319 TIMP4Q99727 224 aa11.28□□□□□ -0.6
HLA-DQB3-203ENST00000425319 TM9SF2Q99805 663 aa11.28□□□□□ -0.6
HLA-DQB3-203ENST00000425319 CD244Q9BZW8 370 aa11.28□□□□□ -0.6
HLA-DQB3-203ENST00000425319 SLC6A15Q9H2J7 730 aa11.28□□□□□ -0.6
HLA-DQB3-203ENST00000425319 LIME1Q9H400 295 aa11.28□□□□□ -0.6
HLA-DQB3-203ENST00000425319 GSX1Q9H4S2 264 aaPredicted RBP11.28□□□□□ -0.6
HLA-DQB3-203ENST00000425319 ZNF395Q9H8N7 513 aaPredicted RBP11.28□□□□□ -0.6
HLA-DQB3-203ENST00000425319 CALHM2Q9HA72 323 aa11.28□□□□□ -0.6
HLA-DQB3-203ENST00000425319 SEMA4BQ9NPR2 832 aaPredicted RBP11.28□□□□□ -0.6
HLA-DQB3-203ENST00000425319 BEX4Q9NWD9 120 aaPredicted RBP11.28□□□□□ -0.6
HLA-DQB3-203ENST00000425319 LYARQ9NX58 379 aaKnown RBP11.28□□□□□ -0.6
HLA-DQB3-203ENST00000425319 OPTCQ9UBM4 332 aa11.28□□□□□ -0.6
HLA-DQB3-203ENST00000425319 CBLCQ9ULV8 474 aa11.28□□□□□ -0.6
HLA-DQB3-203ENST00000425319 CFL2Q9Y281 166 aa11.28□□□□□ -0.6
HLA-DQB3-203ENST00000425319 PCDHGA11Q9Y5H2 935 aa11.28□□□□□ -0.6
HLA-DQB3-203ENST00000425319 HIVEP1P15822 2718 aa11.27□□□□□ -0.61
HLA-DQB3-203ENST00000425319 CTAGE15A4D2H0 777 aa11.27□□□□□ -0.61
HLA-DQB3-203ENST00000425319 CD8B2A6NJW9 211 aa11.27□□□□□ -0.61
HLA-DQB3-203ENST00000425319 BANF1O75531 89 aa11.27□□□□□ -0.61
HLA-DQB3-203ENST00000425319 ACSL3O95573 720 aa11.27□□□□□ -0.61
HLA-DQB3-203ENST00000425319 GPR75O95800 540 aa11.27□□□□□ -0.61
HLA-DQB3-203ENST00000425319 IL18BPO95998 194 aa11.27□□□□□ -0.61
HLA-DQB3-203ENST00000425319 INHBBP09529 407 aa11.27□□□□□ -0.61
HLA-DQB3-203ENST00000425319 FBXO45P0C2W1 286 aa11.27□□□□□ -0.61
HLA-DQB3-203ENST00000425319 CYP4B1P13584 511 aa11.27□□□□□ -0.61
HLA-DQB3-203ENST00000425319 EPB42P16452 691 aa11.27□□□□□ -0.61
HLA-DQB3-203ENST00000425319 TCP1P17987 556 aaKnown RBP11.27□□□□□ -0.61
HLA-DQB3-203ENST00000425319 GALNSP34059 522 aa11.27□□□□□ -0.61
HLA-DQB3-203ENST00000425319 CASP2P42575 452 aa11.27□□□□□ -0.61
HLA-DQB3-203ENST00000425319 NKX6-1P78426 367 aaPredicted RBP11.27□□□□□ -0.61
HLA-DQB3-203ENST00000425319 GAB1Q13480 694 aa11.27□□□□□ -0.61
HLA-DQB3-203ENST00000425319 PCBP2Q15366 365 aaKnown RBP eCLIP11.27□□□□□ -0.61
HLA-DQB3-203ENST00000425319 C18orf21Q32NC0 220 aaPredicted RBP11.27□□□□□ -0.61
HLA-DQB3-203ENST00000425319 MSS51Q4VC12 460 aa11.27□□□□□ -0.61
HLA-DQB3-203ENST00000425319 TRMT10BQ6PF06 316 aaKnown RBP11.27□□□□□ -0.61
HLA-DQB3-203ENST00000425319 CLEC9AQ6UXN8 241 aa11.27□□□□□ -0.61
HLA-DQB3-203ENST00000425319 RAPH1Q70E73 1250 aa11.27□□□□□ -0.61
HLA-DQB3-203ENST00000425319 CHMP1BQ7LBR1 199 aa11.27□□□□□ -0.61
HLA-DQB3-203ENST00000425319 CTAGE6Q86UF2 777 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms