RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 GOLGA4Q13439 2230 aaKnown RBP19.76■□□□□ 0.75
GPC1-202ENST00000420138 IGHV1OR21-1A0A087WYE8 117 aa19.76■□□□□ 0.75
GPC1-202ENST00000420138 FAM86C2PA6NEL3 165 aa19.76■□□□□ 0.75
GPC1-202ENST00000420138 SAC3D1A6NKF1 404 aa19.76■□□□□ 0.75
GPC1-202ENST00000420138 SOCS2O14508 198 aa19.76■□□□□ 0.75
GPC1-202ENST00000420138 SEMG1P04279 462 aa19.76■□□□□ 0.75
GPC1-202ENST00000420138 CFIP05156 583 aa19.76■□□□□ 0.75
GPC1-202ENST00000420138 GLB1P16278 677 aa19.76■□□□□ 0.75
GPC1-202ENST00000420138 CPN2P22792 545 aa19.76■□□□□ 0.75
GPC1-202ENST00000420138 EPHA8P29322 1005 aaPredicted RBP19.76■□□□□ 0.75
GPC1-202ENST00000420138 NTSP30990 170 aa19.76■□□□□ 0.75
GPC1-202ENST00000420138 FEN1P39748 380 aaKnown RBP19.76■□□□□ 0.75
GPC1-202ENST00000420138 CCT3P49368 545 aaKnown RBP19.76■□□□□ 0.75
GPC1-202ENST00000420138 RPS26P62854 115 aaKnown RBP19.76■□□□□ 0.75
GPC1-202ENST00000420138 NR1D2Q14995 579 aa19.76■□□□□ 0.75
GPC1-202ENST00000420138 CBLL1Q75N03 491 aa19.76■□□□□ 0.75
GPC1-202ENST00000420138 HORMAD2Q8N7B1 307 aa19.76■□□□□ 0.75
GPC1-202ENST00000420138 OR5T3Q8NGG3 340 aa19.76■□□□□ 0.75
GPC1-202ENST00000420138 NCSTNQ92542 709 aa19.76■□□□□ 0.75
GPC1-202ENST00000420138 POP5Q969H6 163 aaKnown RBP19.76■□□□□ 0.75
GPC1-202ENST00000420138 BBS4Q96RK4 519 aa19.76■□□□□ 0.75
GPC1-202ENST00000420138 RAD21L1Q9H4I0 556 aa19.76■□□□□ 0.75
GPC1-202ENST00000420138 LYRM4Q9HD34 91 aa19.76■□□□□ 0.75
GPC1-202ENST00000420138 C8orf4Q9NR00 106 aa19.76■□□□□ 0.75
GPC1-202ENST00000420138 SAMD4AQ9UPU9 718 aaKnown RBP19.76■□□□□ 0.75
GPC1-202ENST00000420138 A0A1B0GTQ1 180 aa19.76■□□□□ 0.75
GPC1-202ENST00000420138 TLCD2A6NGC4 264 aa19.76■□□□□ 0.75
GPC1-202ENST00000420138 CLOCKO15516 846 aa19.76■□□□□ 0.75
GPC1-202ENST00000420138 B4GAT1O43505 415 aa19.76■□□□□ 0.75
GPC1-202ENST00000420138 SRPX2O60687 465 aaPredicted RBP19.76■□□□□ 0.75
GPC1-202ENST00000420138 MED26O95402 600 aa19.76■□□□□ 0.75
GPC1-202ENST00000420138 LDLRP01130 860 aa19.76■□□□□ 0.75
GPC1-202ENST00000420138 ZNF10P21506 573 aaPredicted RBP19.76■□□□□ 0.75
GPC1-202ENST00000420138 HOXD12P35452 270 aa19.76■□□□□ 0.75
GPC1-202ENST00000420138 BUD31P41223 144 aaPredicted RBP19.76■□□□□ 0.75
GPC1-202ENST00000420138 RNF220Q5VTB9 566 aa19.76■□□□□ 0.75
GPC1-202ENST00000420138 FAM192AQ9GZU8 254 aa19.76■□□□□ 0.75
GPC1-202ENST00000420138 PADI4Q9UM07 663 aa19.76■□□□□ 0.75
GPC1-202ENST00000420138 OAZ3Q9UMX2 235 aa19.76■□□□□ 0.75
GPC1-202ENST00000420138 ARAFP10398 606 aa19.75■□□□□ 0.75
GPC1-202ENST00000420138 ALPPL2P10696 532 aa19.75■□□□□ 0.75
GPC1-202ENST00000420138 CSNK2A2P19784 350 aaPredicted RBP19.75■□□□□ 0.75
GPC1-202ENST00000420138 MAGEA2P43356 314 aa19.75■□□□□ 0.75
GPC1-202ENST00000420138 TXNL4AP83876 142 aaKnown RBP19.75■□□□□ 0.75
GPC1-202ENST00000420138 EIF3MQ7L2H7 374 aaKnown RBP19.75■□□□□ 0.75
GPC1-202ENST00000420138 SPRED1Q7Z699 444 aa19.75■□□□□ 0.75
GPC1-202ENST00000420138 CHERPQ8IWX8 916 aaKnown RBP19.75■□□□□ 0.75
GPC1-202ENST00000420138 ZFP28Q8NHY6 868 aa19.75■□□□□ 0.75
GPC1-202ENST00000420138 NFKBIDQ8NI38 313 aa19.75■□□□□ 0.75
GPC1-202ENST00000420138 CHRNA10Q9GZZ6 450 aa19.75■□□□□ 0.75
GPC1-202ENST00000420138 PRDM9Q9NQV7 894 aa19.75■□□□□ 0.75
GPC1-202ENST00000420138 MS4A12Q9NXJ0 267 aa19.75■□□□□ 0.75
GPC1-202ENST00000420138 ZNF639Q9UID6 485 aa19.75■□□□□ 0.75
GPC1-202ENST00000420138 ENTPD4Q9Y227 616 aa19.75■□□□□ 0.75
GPC1-202ENST00000420138 PDLIM1O00151 329 aa19.74■□□□□ 0.75
GPC1-202ENST00000420138 CYR61O00622 381 aa19.74■□□□□ 0.75
GPC1-202ENST00000420138 CASC3O15234 703 aaKnown RBP19.74■□□□□ 0.75
GPC1-202ENST00000420138 ZNF682O95780 498 aa19.74■□□□□ 0.75
GPC1-202ENST00000420138 AQP1P29972 269 aa19.74■□□□□ 0.75
GPC1-202ENST00000420138 SIM1P81133 766 aaPredicted RBP19.74■□□□□ 0.75
GPC1-202ENST00000420138 SCARB2Q14108 478 aa19.74■□□□□ 0.75
GPC1-202ENST00000420138 LPAL2Q16609 132 aa19.74■□□□□ 0.75
GPC1-202ENST00000420138 SPDYE7PQ495Y7 208 aa19.74■□□□□ 0.75
GPC1-202ENST00000420138 TMTC4Q5T4D3 741 aa19.74■□□□□ 0.75
GPC1-202ENST00000420138 CEACAM20Q6UY09 585 aa19.74■□□□□ 0.75
GPC1-202ENST00000420138 TMEM64Q6YI46 380 aa19.74■□□□□ 0.75
GPC1-202ENST00000420138 CCDC80Q76M96 950 aa19.74■□□□□ 0.75
GPC1-202ENST00000420138 GATAD2AQ86YP4 633 aa19.74■□□□□ 0.75
GPC1-202ENST00000420138 CA13Q8N1Q1 262 aa19.74■□□□□ 0.75
GPC1-202ENST00000420138 CBR4Q8N4T8 237 aa19.74■□□□□ 0.75
GPC1-202ENST00000420138 TMEM52Q8NDY8 209 aa19.74■□□□□ 0.75
GPC1-202ENST00000420138 SAP25Q8TEE9 199 aa19.74■□□□□ 0.75
GPC1-202ENST00000420138 ZDHHC12Q96GR4 267 aa19.74■□□□□ 0.75
GPC1-202ENST00000420138 CD180Q99467 661 aa19.74■□□□□ 0.75
GPC1-202ENST00000420138 RPS6KA6Q9UK32 745 aa19.74■□□□□ 0.75
GPC1-202ENST00000420138 MYO15AQ9UKN7 3530 aa19.74■□□□□ 0.75
GPC1-202ENST00000420138 VPS13AQ96RL7 3174 aa19.74■□□□□ 0.75
GPC1-202ENST00000420138 TNFAIP8O95379 198 aa19.74■□□□□ 0.75
GPC1-202ENST00000420138 GPR3P46089 330 aa19.74■□□□□ 0.75
GPC1-202ENST00000420138 PRIM2P49643 509 aa19.74■□□□□ 0.75
GPC1-202ENST00000420138 PCBP3P57721 371 aaKnown RBP19.74■□□□□ 0.75
GPC1-202ENST00000420138 DSTNP60981 165 aa19.74■□□□□ 0.75
GPC1-202ENST00000420138 CDK6Q00534 326 aa19.74■□□□□ 0.75
GPC1-202ENST00000420138 MAPK11Q15759 364 aa19.74■□□□□ 0.75
GPC1-202ENST00000420138 GPR19Q15760 415 aa19.74■□□□□ 0.75
GPC1-202ENST00000420138 ZNF630Q2M218 657 aaPredicted RBP19.74■□□□□ 0.75
GPC1-202ENST00000420138 TNFAIP8L2Q6P589 184 aaPredicted RBP19.74■□□□□ 0.75
GPC1-202ENST00000420138 RABEPKQ7Z6M1 372 aa19.74■□□□□ 0.75
GPC1-202ENST00000420138 VTCN1Q7Z7D3 282 aa19.74■□□□□ 0.75
GPC1-202ENST00000420138 NLGN3Q9NZ94 848 aa19.74■□□□□ 0.75
GPC1-202ENST00000420138 PSME2Q9UL46 239 aa19.74■□□□□ 0.75
GPC1-202ENST00000420138 PCDHGB5Q9Y5G0 923 aa19.74■□□□□ 0.75
GPC1-202ENST00000420138 SGK494L7N484 410 aa19.73■□□□□ 0.75
GPC1-202ENST00000420138 HMGN4O00479 90 aa19.73■□□□□ 0.75
GPC1-202ENST00000420138 CSF2RBP32927 897 aa19.73■□□□□ 0.75
GPC1-202ENST00000420138 MPIP34949 423 aa19.73■□□□□ 0.75
GPC1-202ENST00000420138 GPC1P35052 558 aa19.73■□□□□ 0.75
GPC1-202ENST00000420138 SOX18P35713 384 aa19.73■□□□□ 0.75
GPC1-202ENST00000420138 MYBPC1Q00872 1141 aa19.73■□□□□ 0.75
GPC1-202ENST00000420138 SPIDRQ14159 915 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms