RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 TOM1L2Q6ZVM7 507 aa3.17□□□□□ -1.9
SDCBPP3-201ENST00000419629 PLEKHM3Q6ZWE6 761 aa3.17□□□□□ -1.9
SDCBPP3-201ENST00000419629 GLRX5Q86SX6 157 aa3.17□□□□□ -1.9
SDCBPP3-201ENST00000419629 ADCK1Q86TW2 530 aa3.17□□□□□ -1.9
SDCBPP3-201ENST00000419629 CRLF3Q8IUI8 442 aa3.17□□□□□ -1.9
SDCBPP3-201ENST00000419629 BBS7Q8IWZ6 715 aa3.17□□□□□ -1.9
SDCBPP3-201ENST00000419629 ODF3L1Q8IXM7 274 aa3.17□□□□□ -1.9
SDCBPP3-201ENST00000419629 LINC00518Q8N0U6 118 aa3.17□□□□□ -1.9
SDCBPP3-201ENST00000419629 CCDC185Q8N715 623 aa3.17□□□□□ -1.9
SDCBPP3-201ENST00000419629 PI4KAP1Q8N8J0 262 aa3.17□□□□□ -1.9
SDCBPP3-201ENST00000419629 PRELID2Q8N945 189 aa3.17□□□□□ -1.9
SDCBPP3-201ENST00000419629 IL17RCQ8NAC3 791 aa3.17□□□□□ -1.9
SDCBPP3-201ENST00000419629 TDRD5Q8NAT2 981 aaKnown RBP3.17□□□□□ -1.9
SDCBPP3-201ENST00000419629 DBF4BQ8NFT6 615 aa3.17□□□□□ -1.9
SDCBPP3-201ENST00000419629 DMBX1Q8NFW5 382 aa3.17□□□□□ -1.9
SDCBPP3-201ENST00000419629 OR2AK2Q8NG84 335 aa3.17□□□□□ -1.9
SDCBPP3-201ENST00000419629 OR5H6Q8NGV6 325 aa3.17□□□□□ -1.9
SDCBPP3-201ENST00000419629 SPATA22Q8NHS9 363 aa3.17□□□□□ -1.9
SDCBPP3-201ENST00000419629 TEX47Q8TBZ9 253 aa3.17□□□□□ -1.9
SDCBPP3-201ENST00000419629 MCOLN3Q8TDD5 553 aa3.17□□□□□ -1.9
SDCBPP3-201ENST00000419629 BLOC1S5Q8TDH9 187 aa3.17□□□□□ -1.9
SDCBPP3-201ENST00000419629 IGSF8Q969P0 613 aa3.17□□□□□ -1.9
SDCBPP3-201ENST00000419629 TOP1MTQ969P6 601 aa3.17□□□□□ -1.9
SDCBPP3-201ENST00000419629 C11orf24Q96F05 449 aaPredicted RBP3.17□□□□□ -1.9
SDCBPP3-201ENST00000419629 TMEM80Q96HE8 168 aa3.17□□□□□ -1.9
SDCBPP3-201ENST00000419629 SH3YL1Q96HL8 342 aaPredicted RBP3.17□□□□□ -1.9
SDCBPP3-201ENST00000419629 RBM14Q96PK6 669 aaKnown RBP3.17□□□□□ -1.9
SDCBPP3-201ENST00000419629 SEPT5Q99719 369 aaPredicted RBP3.17□□□□□ -1.9
SDCBPP3-201ENST00000419629 SLC29A1Q99808 456 aa3.17□□□□□ -1.9
SDCBPP3-201ENST00000419629 GAL3ST1Q99999 423 aa3.17□□□□□ -1.9
SDCBPP3-201ENST00000419629 TMEM246Q9BRR3 403 aa3.17□□□□□ -1.9
SDCBPP3-201ENST00000419629 SYT17Q9BSW7 474 aa3.17□□□□□ -1.9
SDCBPP3-201ENST00000419629 TRAF4Q9BUZ4 470 aaPredicted RBP3.17□□□□□ -1.9
SDCBPP3-201ENST00000419629 KIFC3Q9BVG8 833 aa3.17□□□□□ -1.9
SDCBPP3-201ENST00000419629 MXD3Q9BW11 206 aa3.17□□□□□ -1.9
SDCBPP3-201ENST00000419629 KIFC1Q9BW19 673 aa3.17□□□□□ -1.9
SDCBPP3-201ENST00000419629 CCDC106Q9BWC9 280 aa3.17□□□□□ -1.9
SDCBPP3-201ENST00000419629 PPA2Q9H2U2 334 aa3.17□□□□□ -1.9
SDCBPP3-201ENST00000419629 MAGIXQ9H6Y5 334 aa3.17□□□□□ -1.9
SDCBPP3-201ENST00000419629 LRRC19Q9H756 370 aa3.17□□□□□ -1.9
SDCBPP3-201ENST00000419629 SMYD3Q9H7B4 428 aa3.17□□□□□ -1.9
SDCBPP3-201ENST00000419629 ERVMER34-1Q9H9K5 563 aa3.17□□□□□ -1.9
SDCBPP3-201ENST00000419629 POLR1BQ9H9Y6 1135 aa3.17□□□□□ -1.9
SDCBPP3-201ENST00000419629 KCNK13Q9HB14 408 aa3.17□□□□□ -1.9
SDCBPP3-201ENST00000419629 TM9SF3Q9HD45 589 aa3.17□□□□□ -1.9
SDCBPP3-201ENST00000419629 KRT84Q9NSB2 600 aa3.17□□□□□ -1.9
SDCBPP3-201ENST00000419629 B3GNT2Q9NY97 397 aa3.17□□□□□ -1.9
SDCBPP3-201ENST00000419629 VPS28Q9UK41 221 aa3.17□□□□□ -1.9
SDCBPP3-201ENST00000419629 GMEB2Q9UKD1 530 aa3.17□□□□□ -1.9
SDCBPP3-201ENST00000419629 NENFQ9UMX5 172 aa3.17□□□□□ -1.9
SDCBPP3-201ENST00000419629 PA2G4Q9UQ80 394 aaKnown RBP3.17□□□□□ -1.9
SDCBPP3-201ENST00000419629 KLHL20Q9Y2M5 609 aa3.17□□□□□ -1.9
SDCBPP3-201ENST00000419629 GRIP1Q9Y3R0 1128 aa3.17□□□□□ -1.9
SDCBPP3-201ENST00000419629 UGT2A1Q9Y4X1 527 aa3.17□□□□□ -1.9
SDCBPP3-201ENST00000419629 ALKQ9UM73 1620 aa3.17□□□□□ -1.9
SDCBPP3-201ENST00000419629 NFASCO94856 1347 aa3.17□□□□□ -1.9
SDCBPP3-201ENST00000419629 MROH5Q6ZUA9 1318 aa3.17□□□□□ -1.9
SDCBPP3-201ENST00000419629 IGSF1Q8N6C5 1336 aa3.17□□□□□ -1.9
SDCBPP3-201ENST00000419629 DIP2BQ9P265 1576 aa3.17□□□□□ -1.9
SDCBPP3-201ENST00000419629 DDX60Q8IY21 1712 aaKnown RBP3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 PRSS51A0A1B0GVH4 220 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 PCP4L1A6NKN8 68 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 PDZK1P1A8MUH7 402 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 IFNL4K9M1U5 179 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 PLK4O00444 970 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 DVL1O14640 695 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 TOR1AO14656 332 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 SLC22A2O15244 555 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 STX7O15400 261 aaKnown RBP3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 KCNN4O15554 427 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 TGFB1I1O43294 461 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 PI15O43692 258 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 GATCO43716 136 aaKnown RBP3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 CALUO43852 315 aaPredicted RBP3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 FGF17O60258 216 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 SNAPINO95295 136 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 MLYCDO95822 493 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 CCNE2O96020 404 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 CRYAAP02489 173 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 APOC1P02654 83 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 MT-ND3P03897 115 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 HIST1H2ABP04908 130 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 CALB1P05937 261 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 RALBP11234 206 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 ITGA2P17301 1181 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 HIST1H2ADP20671 130 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 ANOS1P23352 680 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 PIK3R1P27986 724 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 ERP29P30040 261 aaKnown RBP3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 CCND2P30279 289 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 CORO1AP31146 461 aaKnown RBP3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 SERPINB5P36952 375 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 OPRL1P41146 370 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 MAGEA4P43358 317 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 HCAR3P49019 387 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 SERPINH1P50454 418 aaKnown RBP3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 NDST2P52849 883 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 RAD23AP54725 363 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 DVL1P1P54792 670 aaPredicted RBP3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 NME5P56597 212 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms