RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 RGPD2P0DJD1 1756 aa3.06□□□□□ -1.92
HMGB1P11-201ENST00000413899 ADORA3P0DMS8 318 aa3.06□□□□□ -1.92
HMGB1P11-201ENST00000413899 ACEP12821 1306 aa3.06□□□□□ -1.92
HMGB1P11-201ENST00000413899 ANPEPP15144 967 aa3.06□□□□□ -1.92
HMGB1P11-201ENST00000413899 IL4RP24394 825 aa3.06□□□□□ -1.92
HMGB1P11-201ENST00000413899 OXTRP30559 389 aa3.06□□□□□ -1.92
HMGB1P11-201ENST00000413899 OR1D2P34982 312 aa3.06□□□□□ -1.92
HMGB1P11-201ENST00000413899 ZFP36L2P47974 494 aaKnown RBP3.06□□□□□ -1.92
HMGB1P11-201ENST00000413899 GABPAQ06546 454 aa3.06□□□□□ -1.92
HMGB1P11-201ENST00000413899 CD300CQ08708 224 aa3.06□□□□□ -1.92
HMGB1P11-201ENST00000413899 FCHO2Q0JRZ9 810 aa3.06□□□□□ -1.92
HMGB1P11-201ENST00000413899 RIGQ13278 110 aa3.06□□□□□ -1.92
HMGB1P11-201ENST00000413899 MEF2DQ14814 521 aa3.06□□□□□ -1.92
HMGB1P11-201ENST00000413899 MORF4L2Q15014 288 aa3.06□□□□□ -1.92
HMGB1P11-201ENST00000413899 STXBP2Q15833 593 aa3.06□□□□□ -1.92
HMGB1P11-201ENST00000413899 KNOP1Q1ED39 458 aaKnown RBP3.06□□□□□ -1.92
HMGB1P11-201ENST00000413899 TCTEX1D4Q5JR98 221 aa3.06□□□□□ -1.92
HMGB1P11-201ENST00000413899 Q71RC1 249 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P11-201ENST00000413899 ASPGQ86U10 573 aa3.06□□□□□ -1.92
HMGB1P11-201ENST00000413899 CACUL1Q86Y37 369 aa3.06□□□□□ -1.92
HMGB1P11-201ENST00000413899 LAX1Q8IWV1 398 aa3.06□□□□□ -1.92
HMGB1P11-201ENST00000413899 LYG1Q8N1E2 194 aa3.06□□□□□ -1.92
HMGB1P11-201ENST00000413899 GANCQ8TET4 914 aa3.06□□□□□ -1.92
HMGB1P11-201ENST00000413899 LIPHQ8WWY8 451 aa3.06□□□□□ -1.92
HMGB1P11-201ENST00000413899 GGHQ92820 318 aa3.06□□□□□ -1.92
HMGB1P11-201ENST00000413899 PTP4A1Q93096 173 aa3.06□□□□□ -1.92
HMGB1P11-201ENST00000413899 ATP6V1E2Q96A05 226 aa3.06□□□□□ -1.92
HMGB1P11-201ENST00000413899 NABP1Q96AH0 204 aa3.06□□□□□ -1.92
HMGB1P11-201ENST00000413899 ULK4Q96C45 1275 aa3.06□□□□□ -1.92
HMGB1P11-201ENST00000413899 VMP1Q96GC9 406 aa3.06□□□□□ -1.92
HMGB1P11-201ENST00000413899 PDLIM5Q96HC4 596 aaKnown RBP3.06□□□□□ -1.92
HMGB1P11-201ENST00000413899 ZNF597Q96LX8 424 aa3.06□□□□□ -1.92
HMGB1P11-201ENST00000413899 PSMB7Q99436 277 aa3.06□□□□□ -1.92
HMGB1P11-201ENST00000413899 SOSTQ9BQB4 213 aa3.06□□□□□ -1.92
HMGB1P11-201ENST00000413899 UBAC1Q9BSL1 405 aa3.06□□□□□ -1.92
HMGB1P11-201ENST00000413899 NUSAP1Q9BXS6 441 aaKnown RBP3.06□□□□□ -1.92
HMGB1P11-201ENST00000413899 CACNG6Q9BXT2 260 aa3.06□□□□□ -1.92
HMGB1P11-201ENST00000413899 NAPBQ9H115 298 aa3.06□□□□□ -1.92
HMGB1P11-201ENST00000413899 YTHDC2Q9H6S0 1430 aaKnown RBP3.06□□□□□ -1.92
HMGB1P11-201ENST00000413899 HEXA-AS1Q9H8Q6 139 aa3.06□□□□□ -1.92
HMGB1P11-201ENST00000413899 KCNK13Q9HB14 408 aa3.06□□□□□ -1.92
HMGB1P11-201ENST00000413899 NMUR1Q9HB89 426 aa3.06□□□□□ -1.92
HMGB1P11-201ENST00000413899 TSPAN16Q9UKR8 245 aa3.06□□□□□ -1.92
HMGB1P11-201ENST00000413899 NOL7Q9UMY1 257 aaKnown RBP3.06□□□□□ -1.92
HMGB1P11-201ENST00000413899 RIMS2Q9UQ26 1411 aa3.06□□□□□ -1.92
HMGB1P11-201ENST00000413899 ITM2BQ9Y287 266 aa3.06□□□□□ -1.92
HMGB1P11-201ENST00000413899 FAM208AQ9UK61 1670 aaKnown RBP3.05□□□□□ -1.92
HMGB1P11-201ENST00000413899 SMG6Q86US8 1419 aaKnown RBP3.05□□□□□ -1.92
HMGB1P11-201ENST00000413899 PTPRUQ92729 1446 aa3.05□□□□□ -1.92
HMGB1P11-201ENST00000413899 EIF3AQ14152 1382 aaKnown RBP3.05□□□□□ -1.92
HMGB1P11-201ENST00000413899 KTN1Q86UP2 1357 aaKnown RBP3.05□□□□□ -1.92
HMGB1P11-201ENST00000413899 TRBV5-4A0A0C4DH59 114 aa3.05□□□□□ -1.92
HMGB1P11-201ENST00000413899 TMEM129A0AVI4 362 aa3.05□□□□□ -1.92
HMGB1P11-201ENST00000413899 BCLAF3A2AJT9 711 aaKnown RBP3.05□□□□□ -1.92
HMGB1P11-201ENST00000413899 LRRD1A4D1F6 860 aa3.05□□□□□ -1.92
HMGB1P11-201ENST00000413899 FMO6PO60774 539 aa3.05□□□□□ -1.92
HMGB1P11-201ENST00000413899 CSDE1O75534 798 aaKnown RBP3.05□□□□□ -1.92
HMGB1P11-201ENST00000413899 HOXD4P09016 255 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P11-201ENST00000413899 UROSP10746 265 aa3.05□□□□□ -1.92
HMGB1P11-201ENST00000413899 SKILP12757 684 aa3.05□□□□□ -1.92
HMGB1P11-201ENST00000413899 GATA2P23769 480 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P11-201ENST00000413899 PTGER3P43115 390 aa3.05□□□□□ -1.92
HMGB1P11-201ENST00000413899 FHITP49789 147 aa3.05□□□□□ -1.92
HMGB1P11-201ENST00000413899 NDUFV3P56181 108 aaKnown RBP3.05□□□□□ -1.92
HMGB1P11-201ENST00000413899 DSCR10P59022 87 aa3.05□□□□□ -1.92
HMGB1P11-201ENST00000413899 SPHARQ15513 63 aa3.05□□□□□ -1.92
HMGB1P11-201ENST00000413899 POM121L1PQ3SYA9 428 aa3.05□□□□□ -1.92
HMGB1P11-201ENST00000413899 C1QTNF12Q5T7M4 302 aa3.05□□□□□ -1.92
HMGB1P11-201ENST00000413899 LYPLAL1Q5VWZ2 237 aa3.05□□□□□ -1.92
HMGB1P11-201ENST00000413899 KCTD11Q693B1 232 aa3.05□□□□□ -1.92
HMGB1P11-201ENST00000413899 SNRNP48Q6IEG0 339 aaKnown RBP3.05□□□□□ -1.92
HMGB1P11-201ENST00000413899 IYDQ6PHW0 289 aa3.05□□□□□ -1.92
HMGB1P11-201ENST00000413899 CD164L2Q6UWJ8 174 aa3.05□□□□□ -1.92
HMGB1P11-201ENST00000413899 TMEM64Q6YI46 380 aa3.05□□□□□ -1.92
HMGB1P11-201ENST00000413899 KCTD9Q7L273 389 aa3.05□□□□□ -1.92
HMGB1P11-201ENST00000413899 KCNMB4Q86W47 210 aa3.05□□□□□ -1.92
HMGB1P11-201ENST00000413899 C17orf64Q86WR6 236 aa3.05□□□□□ -1.92
HMGB1P11-201ENST00000413899 ERC1Q8IUD2 1116 aa3.05□□□□□ -1.92
HMGB1P11-201ENST00000413899 TMCO5AQ8N6Q1 288 aa3.05□□□□□ -1.92
HMGB1P11-201ENST00000413899 POM121L12Q8N7R1 296 aa3.05□□□□□ -1.92
HMGB1P11-201ENST00000413899 SPATA18Q8TC71 538 aa3.05□□□□□ -1.92
HMGB1P11-201ENST00000413899 AP2M1Q96CW1 435 aa3.05□□□□□ -1.92
HMGB1P11-201ENST00000413899 EPSTI1Q96J88 318 aa3.05□□□□□ -1.92
HMGB1P11-201ENST00000413899 GUCD1Q96NT3 240 aa3.05□□□□□ -1.92
HMGB1P11-201ENST00000413899 FOXN4Q96NZ1 517 aa3.05□□□□□ -1.92
HMGB1P11-201ENST00000413899 RAB11FIP5Q9BXF6 653 aa3.05□□□□□ -1.92
HMGB1P11-201ENST00000413899 STRADBQ9C0K7 418 aa3.05□□□□□ -1.92
HMGB1P11-201ENST00000413899 ZNF665Q9H7R5 613 aa3.05□□□□□ -1.92
HMGB1P11-201ENST00000413899 MOB1AQ9H8S9 216 aa3.05□□□□□ -1.92
HMGB1P11-201ENST00000413899 WDR41Q9HAD4 459 aa3.05□□□□□ -1.92
HMGB1P11-201ENST00000413899 MAGEF1Q9HAY2 307 aa3.05□□□□□ -1.92
HMGB1P11-201ENST00000413899 MED17Q9NVC6 651 aa3.05□□□□□ -1.92
HMGB1P11-201ENST00000413899 SPG21Q9NZD8 308 aa3.05□□□□□ -1.92
HMGB1P11-201ENST00000413899 THYN1Q9P016 225 aa3.05□□□□□ -1.92
HMGB1P11-201ENST00000413899 SPATA2Q9UM82 520 aa3.05□□□□□ -1.92
HMGB1P11-201ENST00000413899 ERVK-19Q9WJR5 959 aa3.05□□□□□ -1.92
HMGB1P11-201ENST00000413899 ALS2Q96Q42 1657 aa3.04□□□□□ -1.92
HMGB1P11-201ENST00000413899 NSD3Q9BZ95 1437 aa3.04□□□□□ -1.92
HMGB1P11-201ENST00000413899 PLEKHH1Q9ULM0 1364 aa3.04□□□□□ -1.92
HMGB1P11-201ENST00000413899 ZBED9Q6R2W3 1325 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms