RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 C15orf38-AP3S2A0A0A6YYH1 394 aa15.37■□□□□ 0.05
MRPL55-220ENST00000411464 SH3BGRLO75368 114 aa15.37■□□□□ 0.05
MRPL55-220ENST00000411464 EPPINO95925 133 aa15.37■□□□□ 0.05
MRPL55-220ENST00000411464 TGFB1P01137 390 aa15.37■□□□□ 0.05
MRPL55-220ENST00000411464 IL2RAP01589 272 aa15.37■□□□□ 0.05
MRPL55-220ENST00000411464 S100BP04271 92 aaPredicted RBP15.37■□□□□ 0.05
MRPL55-220ENST00000411464 PCNAP12004 261 aa15.37■□□□□ 0.05
MRPL55-220ENST00000411464 TLX1P31314 330 aaPredicted RBP15.37■□□□□ 0.05
MRPL55-220ENST00000411464 ATP6V0D1P61421 351 aa15.37■□□□□ 0.05
MRPL55-220ENST00000411464 IGLV3-21P80748 117 aaPredicted RBP15.37■□□□□ 0.05
MRPL55-220ENST00000411464 PDIA2Q13087 525 aaKnown RBP15.37■□□□□ 0.05
MRPL55-220ENST00000411464 DAZAP2Q15038 168 aaPredicted RBP15.37■□□□□ 0.05
MRPL55-220ENST00000411464 MED27Q6P2C8 311 aa15.37■□□□□ 0.05
MRPL55-220ENST00000411464 LYPD8Q6UX82 237 aa15.37■□□□□ 0.05
MRPL55-220ENST00000411464 SEM1Q6ZVN7 128 aa15.37■□□□□ 0.05
MRPL55-220ENST00000411464 SLC29A4Q7RTT9 530 aa15.37■□□□□ 0.05
MRPL55-220ENST00000411464 MAATS1Q7Z4T9 603 aa15.37■□□□□ 0.05
MRPL55-220ENST00000411464 SLC35F6Q8N357 371 aa15.37■□□□□ 0.05
MRPL55-220ENST00000411464 BBOF1Q8ND07 529 aa15.37■□□□□ 0.05
MRPL55-220ENST00000411464 OR10G3Q8NGC4 313 aa15.37■□□□□ 0.05
MRPL55-220ENST00000411464 TANKQ92844 425 aa15.37■□□□□ 0.05
MRPL55-220ENST00000411464 MBD6Q96DN6 1003 aa15.37■□□□□ 0.05
MRPL55-220ENST00000411464 FBXL20Q96IG2 436 aa15.37■□□□□ 0.05
MRPL55-220ENST00000411464 GAL3ST4Q96RP7 486 aa15.37■□□□□ 0.05
MRPL55-220ENST00000411464 DOHHQ9BU89 302 aa15.37■□□□□ 0.05
MRPL55-220ENST00000411464 RPF2Q9H7B2 306 aaKnown RBP15.37■□□□□ 0.05
MRPL55-220ENST00000411464 GRPEL1Q9HAV7 217 aa15.37■□□□□ 0.05
MRPL55-220ENST00000411464 DMRT3Q9NQL9 472 aa15.37■□□□□ 0.05
MRPL55-220ENST00000411464 ZNF629Q9UEG4 869 aaPredicted RBP15.37■□□□□ 0.05
MRPL55-220ENST00000411464 FOXD3Q9UJU5 478 aaPredicted RBP15.37■□□□□ 0.05
MRPL55-220ENST00000411464 PTBP2Q9UKA9 531 aaKnown RBP15.37■□□□□ 0.05
MRPL55-220ENST00000411464 CBLCQ9ULV8 474 aa15.37■□□□□ 0.05
MRPL55-220ENST00000411464 PHF3Q92576 2039 aaKnown RBP15.37■□□□□ 0.05
MRPL55-220ENST00000411464 TUBAL3A6NHL2 446 aa15.36■□□□□ 0.05
MRPL55-220ENST00000411464 LRRC3CA6NJW4 275 aa15.36■□□□□ 0.05
MRPL55-220ENST00000411464 HRKO00198 91 aa15.36■□□□□ 0.05
MRPL55-220ENST00000411464 SAP18O00422 153 aaKnown RBP15.36■□□□□ 0.05
MRPL55-220ENST00000411464 SCELO95171 688 aa15.36■□□□□ 0.05
MRPL55-220ENST00000411464 FBXO45P0C2W1 286 aa15.36■□□□□ 0.05
MRPL55-220ENST00000411464 CD1DP15813 335 aa15.36■□□□□ 0.05
MRPL55-220ENST00000411464 ALOX15P16050 662 aaPredicted RBP15.36■□□□□ 0.05
MRPL55-220ENST00000411464 GDF1P27539 372 aa15.36■□□□□ 0.05
MRPL55-220ENST00000411464 SERPINB1P30740 379 aa15.36■□□□□ 0.05
MRPL55-220ENST00000411464 CEACAM8P31997 349 aaPredicted RBP15.36■□□□□ 0.05
MRPL55-220ENST00000411464 CASP2P42575 452 aa15.36■□□□□ 0.05
MRPL55-220ENST00000411464 ADAM8P78325 824 aa15.36■□□□□ 0.05
MRPL55-220ENST00000411464 DR1Q01658 176 aa15.36■□□□□ 0.05
MRPL55-220ENST00000411464 DUSP8Q13202 625 aa15.36■□□□□ 0.05
MRPL55-220ENST00000411464 SF3B4Q15427 424 aaKnown RBP eCLIP15.36■□□□□ 0.051e-12■■■■■ 60.4
MRPL55-220ENST00000411464 OR4D1Q15615 310 aa15.36■□□□□ 0.05
MRPL55-220ENST00000411464 FBXL19-AS1Q494R0 122 aa15.36■□□□□ 0.05
MRPL55-220ENST00000411464 TMEM198Q66K66 360 aa15.36■□□□□ 0.05
MRPL55-220ENST00000411464 OR4C11Q6IEV9 310 aa15.36■□□□□ 0.05
MRPL55-220ENST00000411464 DGAT2L6Q6ZPD8 337 aa15.36■□□□□ 0.05
MRPL55-220ENST00000411464 GPR180Q86V85 440 aa15.36■□□□□ 0.05
MRPL55-220ENST00000411464 KIF18BQ86Y91 864 aa15.36■□□□□ 0.05
MRPL55-220ENST00000411464 LACC1Q8IV20 430 aa15.36■□□□□ 0.05
MRPL55-220ENST00000411464 KLHL7Q8IXQ5 586 aa15.36■□□□□ 0.05
MRPL55-220ENST00000411464 RELL2Q8NC24 303 aaPredicted RBP15.36■□□□□ 0.05
MRPL55-220ENST00000411464 PDPRQ8NCN5 879 aa15.36■□□□□ 0.05
MRPL55-220ENST00000411464 TNIP2Q8NFZ5 429 aa15.36■□□□□ 0.05
MRPL55-220ENST00000411464 CMTM7Q96FZ5 175 aa15.36■□□□□ 0.05
MRPL55-220ENST00000411464 SH3GL2Q99962 352 aa15.36■□□□□ 0.05
MRPL55-220ENST00000411464 CD244Q9BZW8 370 aa15.36■□□□□ 0.05
MRPL55-220ENST00000411464 CAB39LQ9H9S4 337 aa15.36■□□□□ 0.05
MRPL55-220ENST00000411464 PROK2Q9HC23 129 aa15.36■□□□□ 0.05
MRPL55-220ENST00000411464 DLL4Q9NR61 685 aa15.36■□□□□ 0.05
MRPL55-220ENST00000411464 TXNDC16Q9P2K2 825 aa15.36■□□□□ 0.05
MRPL55-220ENST00000411464 RNF112Q9ULX5 631 aa15.36■□□□□ 0.05
MRPL55-220ENST00000411464 RPH3AQ9Y2J0 694 aaPredicted RBP15.36■□□□□ 0.05
MRPL55-220ENST00000411464 MTO1Q9Y2Z2 717 aaKnown RBP15.36■□□□□ 0.05
MRPL55-220ENST00000411464 CHCHD2Q9Y6H1 151 aaPredicted RBP15.36■□□□□ 0.05
MRPL55-220ENST00000411464 DNAJC13O75165 2243 aa15.35■□□□□ 0.05
MRPL55-220ENST00000411464 ABCA4P78363 2273 aa15.35■□□□□ 0.05
MRPL55-220ENST00000411464 OR10H2O60403 315 aa15.35■□□□□ 0.05
MRPL55-220ENST00000411464 TRAPPC6AO75865 159 aa15.35■□□□□ 0.05
MRPL55-220ENST00000411464 C1QAP02745 245 aa15.35■□□□□ 0.05
MRPL55-220ENST00000411464 RAF1P04049 648 aa15.35■□□□□ 0.05
MRPL55-220ENST00000411464 EPORP19235 508 aa15.35■□□□□ 0.05
MRPL55-220ENST00000411464 TIMP3P35625 211 aa15.35■□□□□ 0.05
MRPL55-220ENST00000411464 RPL21P46778 160 aaKnown RBP15.35■□□□□ 0.05
MRPL55-220ENST00000411464 RAP1GDS1P52306 607 aa15.35■□□□□ 0.05
MRPL55-220ENST00000411464 KEAP1Q14145 624 aa15.35■□□□□ 0.05
MRPL55-220ENST00000411464 ZNF267Q14586 743 aaPredicted RBP15.35■□□□□ 0.05
MRPL55-220ENST00000411464 ACSF3Q4G176 576 aaPredicted RBP15.35■□□□□ 0.05
MRPL55-220ENST00000411464 TBCELQ5QJ74 424 aa15.35■□□□□ 0.05
MRPL55-220ENST00000411464 DEPDC1Q5TB30 811 aa15.35■□□□□ 0.05
MRPL55-220ENST00000411464 KHDRBS2Q5VWX1 349 aaKnown RBP15.35■□□□□ 0.05
MRPL55-220ENST00000411464 RNF111Q6ZNA4 994 aa15.35■□□□□ 0.05
MRPL55-220ENST00000411464 LRRC70Q7Z2Q7 622 aa15.35■□□□□ 0.05
MRPL55-220ENST00000411464 LAS2Q8IYD9 372 aa15.35■□□□□ 0.05
MRPL55-220ENST00000411464 PM20D2Q8IYS1 436 aa15.35■□□□□ 0.05
MRPL55-220ENST00000411464 ST13P4Q8IZP2 240 aaPredicted RBP15.35■□□□□ 0.05
MRPL55-220ENST00000411464 NAXEQ8NCW5 288 aa15.35■□□□□ 0.05
MRPL55-220ENST00000411464 DOK4Q8TEW6 326 aa15.35■□□□□ 0.05
MRPL55-220ENST00000411464 RGMAQ96B86 450 aa15.35■□□□□ 0.05
MRPL55-220ENST00000411464 ZNF597Q96LX8 424 aa15.35■□□□□ 0.05
MRPL55-220ENST00000411464 TIMP4Q99727 224 aa15.35■□□□□ 0.05
MRPL55-220ENST00000411464 PELOQ9BRX2 385 aaKnown RBP15.35■□□□□ 0.05
MRPL55-220ENST00000411464 CENPKQ9BS16 269 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms