RNA–Protein interactions for RNA: ENST00000409953.5

UBE2F-204, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3 BASIC

Gene UBE2F, Length 924 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-204ENST00000409953 ARHGEF39Q8N4T4 335 aa6.33□□□□□ -1.4
UBE2F-204ENST00000409953 OR9A4Q8NGU2 314 aa6.33□□□□□ -1.4
UBE2F-204ENST00000409953 OR51Q1Q8NH59 317 aa6.33□□□□□ -1.4
UBE2F-204ENST00000409953 ZCCHC10Q8TBK6 192 aa6.33□□□□□ -1.4
UBE2F-204ENST00000409953 DTX3LQ8TDB6 740 aa6.33□□□□□ -1.4
UBE2F-204ENST00000409953 UCN3Q969E3 161 aa6.33□□□□□ -1.4
UBE2F-204ENST00000409953 C16orf45Q96MC5 204 aaPredicted RBP6.33□□□□□ -1.4
UBE2F-204ENST00000409953 IL17FQ96PD4 163 aa6.33□□□□□ -1.4
UBE2F-204ENST00000409953 SH3GL3Q99963 347 aa6.33□□□□□ -1.4
UBE2F-204ENST00000409953 UQCC2Q9BRT2 126 aa6.33□□□□□ -1.4
UBE2F-204ENST00000409953 TXLNGYQ9BZA5 131 aa6.33□□□□□ -1.4
UBE2F-204ENST00000409953 LIN28AQ9H9Z2 209 aaKnown RBP6.33□□□□□ -1.4
UBE2F-204ENST00000409953 ESM1Q9NQ30 184 aa6.33□□□□□ -1.4
UBE2F-204ENST00000409953 SACM1LQ9NTJ5 587 aa6.33□□□□□ -1.4
UBE2F-204ENST00000409953 ETNK2Q9NVF9 386 aa6.33□□□□□ -1.4
UBE2F-204ENST00000409953 RBM22Q9NW64 420 aaKnown RBP eCLIP6.33□□□□□ -1.4
UBE2F-204ENST00000409953 NOP53Q9NZM5 478 aaKnown RBP6.33□□□□□ -1.4
UBE2F-204ENST00000409953 PDP1Q9P0J1 537 aaPredicted RBP6.33□□□□□ -1.4
UBE2F-204ENST00000409953 EXTL2Q9UBQ6 330 aa6.33□□□□□ -1.4
UBE2F-204ENST00000409953 CIDEBQ9UHD4 219 aa6.33□□□□□ -1.4
UBE2F-204ENST00000409953 YARS2Q9Y2Z4 477 aaKnown RBP6.33□□□□□ -1.4
UBE2F-204ENST00000409953 RNF115Q9Y4L5 304 aa6.33□□□□□ -1.4
UBE2F-204ENST00000409953 ATG4BQ9Y4P1 393 aa6.33□□□□□ -1.4
UBE2F-204ENST00000409953 SPO11Q9Y5K1 396 aa6.33□□□□□ -1.4
UBE2F-204ENST00000409953 NCKAP5O14513 1909 aa6.33□□□□□ -1.4
UBE2F-204ENST00000409953 A0A0U1RQJ8 604 aa6.32□□□□□ -1.4
UBE2F-204ENST00000409953 RBMY1BA6NDE4 496 aaKnown RBP6.32□□□□□ -1.4
UBE2F-204ENST00000409953 RBMY1EA6NEQ0 496 aaKnown RBP6.32□□□□□ -1.4
UBE2F-204ENST00000409953 SAGE2PA6NJ88 616 aa6.32□□□□□ -1.4
UBE2F-204ENST00000409953 CEP104O60308 925 aa6.32□□□□□ -1.4
UBE2F-204ENST00000409953 OR2J2O76002 312 aa6.32□□□□□ -1.4
UBE2F-204ENST00000409953 SLITRK5O94991 958 aa6.32□□□□□ -1.4
UBE2F-204ENST00000409953 SNUPNO95149 360 aaKnown RBP6.32□□□□□ -1.4
UBE2F-204ENST00000409953 OPN1MWP04001 364 aa6.32□□□□□ -1.4
UBE2F-204ENST00000409953 P04436 131 aa6.32□□□□□ -1.4
UBE2F-204ENST00000409953 HLA-DQB2P05538 268 aa6.32□□□□□ -1.4
UBE2F-204ENST00000409953 MMP2P08253 660 aa6.32□□□□□ -1.4
UBE2F-204ENST00000409953 CSF3P09919 207 aa6.32□□□□□ -1.4
UBE2F-204ENST00000409953 FAM153BP0C7A2 387 aa6.32□□□□□ -1.4
UBE2F-204ENST00000409953 RBMY1DP0C7P1 496 aaKnown RBP6.32□□□□□ -1.4
UBE2F-204ENST00000409953 OPN1MW2P0DN77 364 aa6.32□□□□□ -1.4
UBE2F-204ENST00000409953 OPN1MW3P0DN78 364 aa6.32□□□□□ -1.4
UBE2F-204ENST00000409953 RHCEP18577 417 aa6.32□□□□□ -1.4
UBE2F-204ENST00000409953 PSMB5P28074 263 aa6.32□□□□□ -1.4
UBE2F-204ENST00000409953 NOS3P29474 1203 aa6.32□□□□□ -1.4
UBE2F-204ENST00000409953 PCK1P35558 622 aa6.32□□□□□ -1.4
UBE2F-204ENST00000409953 SOX3P41225 446 aa6.32□□□□□ -1.4
UBE2F-204ENST00000409953 ZNF165P49910 485 aa6.32□□□□□ -1.4
UBE2F-204ENST00000409953 ZNF143P52747 638 aaPredicted RBP6.32□□□□□ -1.4
UBE2F-204ENST00000409953 UBA52P62987 128 aaKnown RBP6.32□□□□□ -1.4
UBE2F-204ENST00000409953 CD83Q01151 205 aa6.32□□□□□ -1.4
UBE2F-204ENST00000409953 BTKQ06187 659 aa6.32□□□□□ -1.4
UBE2F-204ENST00000409953 KIF5AQ12840 1032 aa6.32□□□□□ -1.4
UBE2F-204ENST00000409953 GAB1Q13480 694 aa6.32□□□□□ -1.4
UBE2F-204ENST00000409953 FAM189A2Q15884 450 aa6.32□□□□□ -1.4
UBE2F-204ENST00000409953 ZDHHC20Q5W0Z9 365 aa6.32□□□□□ -1.4
UBE2F-204ENST00000409953 TRIM65Q6PJ69 517 aa6.32□□□□□ -1.4
UBE2F-204ENST00000409953 SUSD1Q6UWL2 747 aa6.32□□□□□ -1.4
UBE2F-204ENST00000409953 RTL4Q6ZR62 310 aa6.32□□□□□ -1.4
UBE2F-204ENST00000409953 DTX2Q86UW9 622 aa6.32□□□□□ -1.4
UBE2F-204ENST00000409953 ANKRD53Q8N9V6 530 aa6.32□□□□□ -1.4
UBE2F-204ENST00000409953 BBOF1Q8ND07 529 aa6.32□□□□□ -1.4
UBE2F-204ENST00000409953 PLPP5Q8NEB5 264 aa6.32□□□□□ -1.4
UBE2F-204ENST00000409953 ANKRD7Q92527 254 aa6.32□□□□□ -1.4
UBE2F-204ENST00000409953 DCUN1D1Q96GG9 259 aa6.32□□□□□ -1.4
UBE2F-204ENST00000409953 ZNF845Q96IR2 970 aaPredicted RBP6.32□□□□□ -1.4
UBE2F-204ENST00000409953 LRGUKQ96M69 825 aa6.32□□□□□ -1.4
UBE2F-204ENST00000409953 TRIB3Q96RU7 358 aa6.32□□□□□ -1.4
UBE2F-204ENST00000409953 MIPEPQ99797 713 aa6.32□□□□□ -1.4
UBE2F-204ENST00000409953 TM9SF2Q99805 663 aa6.32□□□□□ -1.4
UBE2F-204ENST00000409953 TUBA1CQ9BQE3 449 aa6.32□□□□□ -1.4
UBE2F-204ENST00000409953 RSRP1Q9BUV0 290 aa6.32□□□□□ -1.4
UBE2F-204ENST00000409953 SNRNP25Q9BV90 132 aaKnown RBP6.32□□□□□ -1.4
UBE2F-204ENST00000409953 OSBPL10Q9BXB5 764 aa6.32□□□□□ -1.4
UBE2F-204ENST00000409953 CACNG6Q9BXT2 260 aa6.32□□□□□ -1.4
UBE2F-204ENST00000409953 KLHL4Q9C0H6 718 aa6.32□□□□□ -1.4
UBE2F-204ENST00000409953 OPN3Q9H1Y3 402 aaPredicted RBP6.32□□□□□ -1.4
UBE2F-204ENST00000409953 RABEP2Q9H5N1 569 aa6.32□□□□□ -1.4
UBE2F-204ENST00000409953 SYNPO2LQ9H987 977 aa6.32□□□□□ -1.4
UBE2F-204ENST00000409953 ADAP2Q9NPF8 381 aa6.32□□□□□ -1.4
UBE2F-204ENST00000409953 HAUS2Q9NVX0 235 aa6.32□□□□□ -1.4
UBE2F-204ENST00000409953 SIRT5Q9NXA8 310 aa6.32□□□□□ -1.4
UBE2F-204ENST00000409953 GAR1Q9NY12 217 aaKnown RBP6.32□□□□□ -1.4
UBE2F-204ENST00000409953 ELOVL5Q9NYP7 299 aa6.32□□□□□ -1.4
UBE2F-204ENST00000409953 PTBP2Q9UKA9 531 aaKnown RBP6.32□□□□□ -1.4
UBE2F-204ENST00000409953 PRELID1Q9Y255 219 aa6.32□□□□□ -1.4
UBE2F-204ENST00000409953 A0A1W2PNV4 684 aa6.31□□□□□ -1.4
UBE2F-204ENST00000409953 GOLGA6L4A6NEF3 574 aa6.31□□□□□ -1.4
UBE2F-204ENST00000409953 GOLGA6L9A6NEM1 432 aa6.31□□□□□ -1.4
UBE2F-204ENST00000409953 LRRC3CA6NJW4 275 aa6.31□□□□□ -1.4
UBE2F-204ENST00000409953 VWC2LB2RUY7 222 aa6.31□□□□□ -1.4
UBE2F-204ENST00000409953 F5H0A9 414 aaPredicted RBP6.31□□□□□ -1.4
UBE2F-204ENST00000409953 G3V4G9 280 aa6.31□□□□□ -1.4
UBE2F-204ENST00000409953 H0YIG0 161 aa6.31□□□□□ -1.4
UBE2F-204ENST00000409953 RIPK2O43353 540 aa6.31□□□□□ -1.4
UBE2F-204ENST00000409953 VPS26AO75436 327 aa6.31□□□□□ -1.4
UBE2F-204ENST00000409953 SLC22A3O75751 556 aa6.31□□□□□ -1.4
UBE2F-204ENST00000409953 FKBP9O95302 570 aa6.31□□□□□ -1.4
UBE2F-204ENST00000409953 RPSAP08865 295 aaKnown RBP6.31□□□□□ -1.4
UBE2F-204ENST00000409953 NUDT17P0C025 328 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms