RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 GAB2Q9UQC2 676 aa4.39□□□□□ -1.71
HMGB3P19-201ENST00000403971 CHKBQ9Y259 395 aa4.39□□□□□ -1.71
HMGB3P19-201ENST00000403971 PPP2R2CQ9Y2T4 447 aa4.39□□□□□ -1.71
HMGB3P19-201ENST00000403971 PTPRSQ13332 1948 aa4.38□□□□□ -1.71
HMGB3P19-201ENST00000403971 GTPBP10A4D1E9 387 aaKnown RBP4.38□□□□□ -1.71
HMGB3P19-201ENST00000403971 ZNF233A6NK53 670 aa4.38□□□□□ -1.71
HMGB3P19-201ENST00000403971 HHLA1C9JL84 531 aa4.38□□□□□ -1.71
HMGB3P19-201ENST00000403971 LINC01565O15544 149 aa4.38□□□□□ -1.71
HMGB3P19-201ENST00000403971 FAM189A1O60320 539 aa4.38□□□□□ -1.71
HMGB3P19-201ENST00000403971 STX10O60499 249 aa4.38□□□□□ -1.71
HMGB3P19-201ENST00000403971 AKAP3O75969 853 aa4.38□□□□□ -1.71
HMGB3P19-201ENST00000403971 PLGP00747 810 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P19-201ENST00000403971 CHRNA1P02708 482 aa4.38□□□□□ -1.71
HMGB3P19-201ENST00000403971 HMBSP08397 361 aa4.38□□□□□ -1.71
HMGB3P19-201ENST00000403971 CLTAP09496 248 aa4.38□□□□□ -1.71
HMGB3P19-201ENST00000403971 STAG3L1P0CL83 205 aa4.38□□□□□ -1.71
HMGB3P19-201ENST00000403971 MCF2P10911 925 aa4.38□□□□□ -1.71
HMGB3P19-201ENST00000403971 GTF2H1P32780 548 aa4.38□□□□□ -1.71
HMGB3P19-201ENST00000403971 MAGEA11P43364 429 aa4.38□□□□□ -1.71
HMGB3P19-201ENST00000403971 MTIF2P46199 727 aaKnown RBP4.38□□□□□ -1.71
HMGB3P19-201ENST00000403971 CASP4P49662 377 aa4.38□□□□□ -1.71
HMGB3P19-201ENST00000403971 AP3M2P53677 418 aa4.38□□□□□ -1.71
HMGB3P19-201ENST00000403971 MFAP3P55082 362 aa4.38□□□□□ -1.71
HMGB3P19-201ENST00000403971 TRAP1Q12931 704 aaKnown RBP4.38□□□□□ -1.71
HMGB3P19-201ENST00000403971 KRT31Q15323 416 aa4.38□□□□□ -1.71
HMGB3P19-201ENST00000403971 SNRNP35Q16560 246 aaKnown RBP4.38□□□□□ -1.71
HMGB3P19-201ENST00000403971 DCAF4L1Q3SXM0 396 aa4.38□□□□□ -1.71
HMGB3P19-201ENST00000403971 CCDC40Q4G0X9 1142 aa4.38□□□□□ -1.71
HMGB3P19-201ENST00000403971 ZRANB3Q5FWF4 1079 aa4.38□□□□□ -1.71
HMGB3P19-201ENST00000403971 NOTUMQ6P988 496 aa4.38□□□□□ -1.71
HMGB3P19-201ENST00000403971 CATSPER4Q7RTX7 472 aa4.38□□□□□ -1.71
HMGB3P19-201ENST00000403971 FAM228AQ86W67 206 aa4.38□□□□□ -1.71
HMGB3P19-201ENST00000403971 SIX6OS1Q8N1H7 587 aa4.38□□□□□ -1.71
HMGB3P19-201ENST00000403971 NOA1Q8NC60 698 aaKnown RBP4.38□□□□□ -1.71
HMGB3P19-201ENST00000403971 C9orf43Q8TAL5 461 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P19-201ENST00000403971 FAM76AQ8TAV0 307 aa4.38□□□□□ -1.71
HMGB3P19-201ENST00000403971 TMEM190Q8WZ59 177 aa4.38□□□□□ -1.71
HMGB3P19-201ENST00000403971 FAM162AQ96A26 154 aa4.38□□□□□ -1.71
HMGB3P19-201ENST00000403971 PYCR2Q96C36 320 aa4.38□□□□□ -1.71
HMGB3P19-201ENST00000403971 HES6Q96HZ4 224 aa4.38□□□□□ -1.71
HMGB3P19-201ENST00000403971 ERGIC2Q96RQ1 377 aa4.38□□□□□ -1.71
HMGB3P19-201ENST00000403971 TSPAN18Q96SJ8 248 aa4.38□□□□□ -1.71
HMGB3P19-201ENST00000403971 MAP3K3Q99759 626 aa4.38□□□□□ -1.71
HMGB3P19-201ENST00000403971 TUBGCP2Q9BSJ2 902 aa4.38□□□□□ -1.71
HMGB3P19-201ENST00000403971 TCHPQ9BT92 498 aa4.38□□□□□ -1.71
HMGB3P19-201ENST00000403971 XPO4Q9C0E2 1151 aaKnown RBP4.38□□□□□ -1.71
HMGB3P19-201ENST00000403971 THAP2Q9H0W7 228 aa4.38□□□□□ -1.71
HMGB3P19-201ENST00000403971 C11orf49Q9H6J7 331 aa4.38□□□□□ -1.71
HMGB3P19-201ENST00000403971 ZWILCHQ9H900 591 aa4.38□□□□□ -1.71
HMGB3P19-201ENST00000403971 LMAN1LQ9HAT1 526 aa4.38□□□□□ -1.71
HMGB3P19-201ENST00000403971 CHST11Q9NPF2 352 aa4.38□□□□□ -1.71
HMGB3P19-201ENST00000403971 TBX21Q9UL17 535 aa4.38□□□□□ -1.71
HMGB3P19-201ENST00000403971 MYO9BQ13459 2157 aa4.37□□□□□ -1.71
HMGB3P19-201ENST00000403971 B4GALT5O43286 388 aa4.37□□□□□ -1.71
HMGB3P19-201ENST00000403971 N4BP1O75113 896 aaKnown RBP4.37□□□□□ -1.71
HMGB3P19-201ENST00000403971 ADCY5O95622 1261 aa4.37□□□□□ -1.71
HMGB3P19-201ENST00000403971 EML2O95834 649 aa4.37□□□□□ -1.71
HMGB3P19-201ENST00000403971 APOHP02749 345 aaPredicted RBP4.37□□□□□ -1.71
HMGB3P19-201ENST00000403971 SPP1P10451 314 aa4.37□□□□□ -1.71
HMGB3P19-201ENST00000403971 KRT13P13646 458 aa4.37□□□□□ -1.71
HMGB3P19-201ENST00000403971 RFC2P35250 354 aa4.37□□□□□ -1.71
HMGB3P19-201ENST00000403971 GLIPR1P48060 266 aa4.37□□□□□ -1.71
HMGB3P19-201ENST00000403971 CYP24A1Q07973 514 aa4.37□□□□□ -1.71
HMGB3P19-201ENST00000403971 CCDC173Q0VFZ6 552 aa4.37□□□□□ -1.71
HMGB3P19-201ENST00000403971 CETN1Q12798 172 aa4.37□□□□□ -1.71
HMGB3P19-201ENST00000403971 PTK6Q13882 451 aa4.37□□□□□ -1.71
HMGB3P19-201ENST00000403971 EXT1Q16394 746 aa4.37□□□□□ -1.71
HMGB3P19-201ENST00000403971 FAM174BQ3ZCQ3 159 aa4.37□□□□□ -1.71
HMGB3P19-201ENST00000403971 XKR6Q5GH73 641 aa4.37□□□□□ -1.71
HMGB3P19-201ENST00000403971 ARHGAP11AQ6P4F7 1023 aa4.37□□□□□ -1.71
HMGB3P19-201ENST00000403971 CYB5D1Q6P9G0 228 aa4.37□□□□□ -1.71
HMGB3P19-201ENST00000403971 ZNF449Q6P9G9 518 aa4.37□□□□□ -1.71
HMGB3P19-201ENST00000403971 Q6ZTC4 211 aa4.37□□□□□ -1.71
HMGB3P19-201ENST00000403971 NOTCH2NLQ7Z3S9 236 aa4.37□□□□□ -1.71
HMGB3P19-201ENST00000403971 CBWD2Q8IUF1 395 aa4.37□□□□□ -1.71
HMGB3P19-201ENST00000403971 VSTM4Q8IW00 320 aa4.37□□□□□ -1.71
HMGB3P19-201ENST00000403971 CD302Q8IX05 232 aa4.37□□□□□ -1.71
HMGB3P19-201ENST00000403971 RSPH1Q8WYR4 309 aa4.37□□□□□ -1.71
HMGB3P19-201ENST00000403971 SUSD6Q92537 303 aa4.37□□□□□ -1.71
HMGB3P19-201ENST00000403971 TSACCQ96A04 125 aaPredicted RBP4.37□□□□□ -1.71
HMGB3P19-201ENST00000403971 SLC35C1Q96A29 364 aa4.37□□□□□ -1.71
HMGB3P19-201ENST00000403971 BSCL2Q96G97 398 aaPredicted RBP4.37□□□□□ -1.71
HMGB3P19-201ENST00000403971 C4orf45Q96LM5 186 aa4.37□□□□□ -1.71
HMGB3P19-201ENST00000403971 NAP1L5Q96NT1 182 aaPredicted RBP4.37□□□□□ -1.71
HMGB3P19-201ENST00000403971 NDNQ99608 321 aa4.37□□□□□ -1.71
HMGB3P19-201ENST00000403971 LITAFQ99732 161 aa4.37□□□□□ -1.71
HMGB3P19-201ENST00000403971 NUP58Q9BVL2 599 aa4.37□□□□□ -1.71
HMGB3P19-201ENST00000403971 CCDC94Q9BW85 323 aaPredicted RBP4.37□□□□□ -1.71
HMGB3P19-201ENST00000403971 FTHL17Q9BXU8 183 aa4.37□□□□□ -1.71
HMGB3P19-201ENST00000403971 TRPV6Q9H1D0 765 aa4.37□□□□□ -1.71
HMGB3P19-201ENST00000403971 ASB7Q9H672 318 aa4.37□□□□□ -1.71
HMGB3P19-201ENST00000403971 IFNKQ9P0W0 207 aa4.37□□□□□ -1.71
HMGB3P19-201ENST00000403971 GINS2Q9Y248 185 aa4.37□□□□□ -1.71
HMGB3P19-201ENST00000403971 COQ4Q9Y3A0 265 aa4.37□□□□□ -1.71
HMGB3P19-201ENST00000403971 PYGO1Q9Y3Y4 419 aa4.37□□□□□ -1.71
HMGB3P19-201ENST00000403971 NLRC5Q86WI3 1866 aa4.37□□□□□ -1.71
HMGB3P19-201ENST00000403971 MKI67P46013 3256 aaKnown RBP4.36□□□□□ -1.71
HMGB3P19-201ENST00000403971 CEP290O15078 2479 aa4.36□□□□□ -1.71
HMGB3P19-201ENST00000403971 IGHV4-4A0A075B6R2 117 aa4.36□□□□□ -1.71
HMGB3P19-201ENST00000403971 TRBV5-5A0A0J9YX44 114 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms