RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 PSMA1P25786 263 aaKnown RBP18.85■□□□□ 0.61
CCDC47-202ENST00000403162 LTBRP36941 435 aa18.85■□□□□ 0.61
CCDC47-202ENST00000403162 SOX3P41225 446 aa18.85■□□□□ 0.61
CCDC47-202ENST00000403162 DSTNP60981 165 aa18.85■□□□□ 0.61
CCDC47-202ENST00000403162 PSPHP78330 225 aa18.85■□□□□ 0.61
CCDC47-202ENST00000403162 SPHARQ15513 63 aa18.85■□□□□ 0.61
CCDC47-202ENST00000403162 DUSP7Q16829 419 aa18.85■□□□□ 0.61
CCDC47-202ENST00000403162 FAM78AQ5JUQ0 283 aa18.85■□□□□ 0.61
CCDC47-202ENST00000403162 Q6ZVU0 165 aa18.85■□□□□ 0.61
CCDC47-202ENST00000403162 RAB43Q86YS6 212 aa18.85■□□□□ 0.61
CCDC47-202ENST00000403162 CELF5Q8N6W0 485 aaKnown RBP18.85■□□□□ 0.61
CCDC47-202ENST00000403162 RASGEF1AQ8N9B8 481 aa18.85■□□□□ 0.61
CCDC47-202ENST00000403162 LILRB4Q8NHJ6 448 aa18.85■□□□□ 0.61
CCDC47-202ENST00000403162 GPR151Q8TDV0 419 aa18.85■□□□□ 0.61
CCDC47-202ENST00000403162 RIOK2Q9BVS4 552 aaKnown RBP18.85■□□□□ 0.61
CCDC47-202ENST00000403162 MND1Q9BWT6 205 aa18.85■□□□□ 0.61
CCDC47-202ENST00000403162 UCK2Q9BZX2 261 aa18.85■□□□□ 0.61
CCDC47-202ENST00000403162 C11orf16Q9NQ32 467 aa18.85■□□□□ 0.61
CCDC47-202ENST00000403162 NDUFB11Q9NX14 153 aa18.85■□□□□ 0.61
CCDC47-202ENST00000403162 MUTYHQ9UIF7 546 aa18.85■□□□□ 0.61
CCDC47-202ENST00000403162 STUB1Q9UNE7 303 aa18.85■□□□□ 0.61
CCDC47-202ENST00000403162 TRBV4-1A0A0J9YWV2 114 aa18.85■□□□□ 0.61
CCDC47-202ENST00000403162 IQCMA0A1B0GVH7 501 aa18.85■□□□□ 0.61
CCDC47-202ENST00000403162 H3BM21 787 aa18.85■□□□□ 0.61
CCDC47-202ENST00000403162 SEMA3DO95025 777 aa18.85■□□□□ 0.61
CCDC47-202ENST00000403162 ITGB7P26010 798 aa18.85■□□□□ 0.61
CCDC47-202ENST00000403162 SOAT1P35610 550 aa18.85■□□□□ 0.61
CCDC47-202ENST00000403162 ETV3P41162 512 aa18.85■□□□□ 0.61
CCDC47-202ENST00000403162 LIM2P55344 173 aa18.85■□□□□ 0.61
CCDC47-202ENST00000403162 TAS2R50P59544 299 aa18.85■□□□□ 0.61
CCDC47-202ENST00000403162 TBPL1P62380 186 aa18.85■□□□□ 0.61
CCDC47-202ENST00000403162 SLBPQ14493 270 aaKnown RBP eCLIP18.85■□□□□ 0.61
CCDC47-202ENST00000403162 PUM1Q14671 1186 aaKnown RBP eCLIP18.85■□□□□ 0.611e-6■□□□□ 9.6
CCDC47-202ENST00000403162 ZNF79Q15937 498 aa18.85■□□□□ 0.61
CCDC47-202ENST00000403162 ARMC4Q5T2S8 1044 aa18.85■□□□□ 0.61
CCDC47-202ENST00000403162 REEP3Q6NUK4 255 aa18.85■□□□□ 0.61
CCDC47-202ENST00000403162 FBXO15Q8NCQ5 510 aaPredicted RBP18.85■□□□□ 0.61
CCDC47-202ENST00000403162 ZNF480Q8WV37 535 aa18.85■□□□□ 0.61
CCDC47-202ENST00000403162 BTN2A2Q8WVV5 523 aa18.85■□□□□ 0.61
CCDC47-202ENST00000403162 ST6GAL2Q96JF0 529 aa18.85■□□□□ 0.61
CCDC47-202ENST00000403162 RIPOR3Q96MK2 946 aa18.85■□□□□ 0.61
CCDC47-202ENST00000403162 NEDD4LQ96PU5 975 aa18.85■□□□□ 0.61
CCDC47-202ENST00000403162 IL4I1Q96RQ9 567 aa18.85■□□□□ 0.61
CCDC47-202ENST00000403162 GDE1Q9NZC3 331 aa18.85■□□□□ 0.61
CCDC47-202ENST00000403162 HYKKA2RU49 373 aa18.84■□□□□ 0.61
CCDC47-202ENST00000403162 TRAPPC2P0DI81 140 aa18.84■□□□□ 0.61
CCDC47-202ENST00000403162 TRAPPC2BP0DI82 140 aa18.84■□□□□ 0.61
CCDC47-202ENST00000403162 VIPR2P41587 438 aa18.84■□□□□ 0.61
CCDC47-202ENST00000403162 PRSS53Q2L4Q9 553 aa18.84■□□□□ 0.61
CCDC47-202ENST00000403162 C12orf73Q69YU5 71 aa18.84■□□□□ 0.61
CCDC47-202ENST00000403162 IL17RCQ8NAC3 791 aa18.84■□□□□ 0.61
CCDC47-202ENST00000403162 VANGL1Q8TAA9 524 aaPredicted RBP18.84■□□□□ 0.61
CCDC47-202ENST00000403162 SMARCD2Q92925 531 aa18.84■□□□□ 0.61
CCDC47-202ENST00000403162 PDXPQ96GD0 296 aa18.84■□□□□ 0.61
CCDC47-202ENST00000403162 ASB16Q96NS5 453 aa18.84■□□□□ 0.61
CCDC47-202ENST00000403162 SRRQ9GZT4 340 aa18.84■□□□□ 0.61
CCDC47-202ENST00000403162 CLEC2DQ9UHP7 191 aa18.84■□□□□ 0.61
CCDC47-202ENST00000403162 ICKQ9UPZ9 632 aa18.84■□□□□ 0.61
CCDC47-202ENST00000403162 MGAT4BQ9UQ53 548 aa18.84■□□□□ 0.61
CCDC47-202ENST00000403162 PIPSLA2A3N6 862 aa18.83■□□□□ 0.61
CCDC47-202ENST00000403162 FAM227AF5H4B4 570 aa18.83■□□□□ 0.61
CCDC47-202ENST00000403162 TGFB1P01137 390 aa18.83■□□□□ 0.61
CCDC47-202ENST00000403162 C1GALT1C1LP0DN25 315 aa18.83■□□□□ 0.61
CCDC47-202ENST00000403162 CKMT1AP12532 417 aa18.83■□□□□ 0.61
CCDC47-202ENST00000403162 NPPBP16860 134 aa18.83■□□□□ 0.61
CCDC47-202ENST00000403162 UQCRC2P22695 453 aa18.83■□□□□ 0.61
CCDC47-202ENST00000403162 RPS5P46782 204 aaKnown RBP18.83■□□□□ 0.61
CCDC47-202ENST00000403162 ZFP69Q49AA0 526 aa18.83■□□□□ 0.61
CCDC47-202ENST00000403162 IKBIPQ70UQ0 350 aa18.83■□□□□ 0.61
CCDC47-202ENST00000403162 LAX1Q8IWV1 398 aa18.83■□□□□ 0.61
CCDC47-202ENST00000403162 SLC34A3Q8N130 599 aa18.83■□□□□ 0.61
CCDC47-202ENST00000403162 FAM181AQ8N9Y4 354 aa18.83■□□□□ 0.61
CCDC47-202ENST00000403162 OR51B5Q9H339 312 aa18.83■□□□□ 0.61
CCDC47-202ENST00000403162 KIF26AQ9ULI4 1882 aaPredicted RBP18.83■□□□□ 0.61
CCDC47-202ENST00000403162 TMCC3Q9ULS5 477 aa18.83■□□□□ 0.61
CCDC47-202ENST00000403162 SH2B3Q9UQQ2 575 aa18.83■□□□□ 0.61
CCDC47-202ENST00000403162 DYRK1BQ9Y463 629 aa18.83■□□□□ 0.61
CCDC47-202ENST00000403162 SAP18O00422 153 aaKnown RBP18.83■□□□□ 0.6
CCDC47-202ENST00000403162 AP3D1O14617 1153 aa18.83■□□□□ 0.6
CCDC47-202ENST00000403162 C1orf105O95561 183 aa18.83■□□□□ 0.6
CCDC47-202ENST00000403162 IL7P13232 177 aa18.83■□□□□ 0.6
CCDC47-202ENST00000403162 WEE1P30291 646 aa18.83■□□□□ 0.6
CCDC47-202ENST00000403162 RUNX1T1Q06455 604 aa18.83■□□□□ 0.6
CCDC47-202ENST00000403162 BAK1Q16611 211 aa18.83■□□□□ 0.6
CCDC47-202ENST00000403162 LEXMQ3ZCV2 418 aa18.83■□□□□ 0.6
CCDC47-202ENST00000403162 ZMAT1Q5H9K5 638 aa18.83■□□□□ 0.6
CCDC47-202ENST00000403162 VN1R5Q7Z5H4 357 aa18.83■□□□□ 0.6
CCDC47-202ENST00000403162 NANOGP1Q8N7R0 232 aa18.83■□□□□ 0.6
CCDC47-202ENST00000403162 PROKR2Q8NFJ6 384 aa18.83■□□□□ 0.6
CCDC47-202ENST00000403162 OR2A12Q8NGT7 310 aa18.83■□□□□ 0.6
CCDC47-202ENST00000403162 RSPRY1Q96DX4 576 aa18.83■□□□□ 0.6
CCDC47-202ENST00000403162 MSLNLQ96KJ4 702 aa18.83■□□□□ 0.6
CCDC47-202ENST00000403162 DHRS1Q96LJ7 313 aa18.83■□□□□ 0.6
CCDC47-202ENST00000403162 DNAJC27Q9NZQ0 273 aa18.83■□□□□ 0.6
CCDC47-202ENST00000403162 RPL36Q9Y3U8 105 aaKnown RBP18.83■□□□□ 0.6
CCDC47-202ENST00000403162 CMAHPQ9Y471 501 aa18.83■□□□□ 0.6
CCDC47-202ENST00000403162 WNT6Q9Y6F9 365 aa18.83■□□□□ 0.6
CCDC47-202ENST00000403162 CCDC88CQ9P219 2028 aa18.82■□□□□ 0.6
CCDC47-202ENST00000403162 CENPBD1B2RD01 187 aa18.82■□□□□ 0.6
CCDC47-202ENST00000403162 TPST2O60704 377 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms