RNA–Protein interactions for RNA: ENST00000400911.7

VAMP1-203, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-203ENST00000400911 FBXO45P0C2W1 286 aa13.36□□□□□ -0.27
VAMP1-203ENST00000400911 HIST1H1TP22492 207 aaPredicted RBP13.36□□□□□ -0.27
VAMP1-203ENST00000400911 CPN2P22792 545 aa13.36□□□□□ -0.27
VAMP1-203ENST00000400911 GDF1P27539 372 aa13.36□□□□□ -0.27
VAMP1-203ENST00000400911 SERPINB3P29508 390 aa13.36□□□□□ -0.27
VAMP1-203ENST00000400911 HSPA7P48741 367 aa13.36□□□□□ -0.27
VAMP1-203ENST00000400911 FNTAP49354 379 aa13.36□□□□□ -0.27
VAMP1-203ENST00000400911 CRYZQ08257 329 aaKnown RBP13.36□□□□□ -0.27
VAMP1-203ENST00000400911 TAOK1Q7L7X3 1001 aa13.36□□□□□ -0.27
VAMP1-203ENST00000400911 ZC3HC1Q86WB0 502 aaKnown RBP13.36□□□□□ -0.27
VAMP1-203ENST00000400911 KIF18BQ86Y91 864 aa13.36□□□□□ -0.27
VAMP1-203ENST00000400911 KRTAP1-3Q8IUG1 177 aa13.36□□□□□ -0.27
VAMP1-203ENST00000400911 SNX31Q8N9S9 440 aa13.36□□□□□ -0.27
VAMP1-203ENST00000400911 SRFBP1Q8NEF9 429 aaKnown RBP13.36□□□□□ -0.27
VAMP1-203ENST00000400911 ARSGQ96EG1 525 aa13.36□□□□□ -0.27
VAMP1-203ENST00000400911 WDR34Q96EX3 536 aa13.36□□□□□ -0.27
VAMP1-203ENST00000400911 PTCD3Q96EY7 689 aaKnown RBP13.36□□□□□ -0.27
VAMP1-203ENST00000400911 NAP1L3Q99457 506 aaPredicted RBP13.36□□□□□ -0.27
VAMP1-203ENST00000400911 WDR83Q9BRX9 315 aaKnown RBP13.36□□□□□ -0.27
VAMP1-203ENST00000400911 WWOXQ9NZC7 414 aa13.36□□□□□ -0.27
VAMP1-203ENST00000400911 IQANK1A0A1B0GTG1 560 aa13.35□□□□□ -0.27
VAMP1-203ENST00000400911 CLCA1A8K7I4 914 aa13.35□□□□□ -0.27
VAMP1-203ENST00000400911 EEF1E1-BLOC1S5C9J1V9 151 aa13.35□□□□□ -0.27
VAMP1-203ENST00000400911 PGRMC1O00264 195 aaKnown RBP13.35□□□□□ -0.27
VAMP1-203ENST00000400911 EEF1E1O43324 174 aaKnown RBP13.35□□□□□ -0.27
VAMP1-203ENST00000400911 TRIM3O75382 744 aaPredicted RBP13.35□□□□□ -0.27
VAMP1-203ENST00000400911 ACSL3O95573 720 aa13.35□□□□□ -0.27
VAMP1-203ENST00000400911 TGFB1P01137 390 aa13.35□□□□□ -0.27
VAMP1-203ENST00000400911 GGT5P36269 586 aa13.35□□□□□ -0.27
VAMP1-203ENST00000400911 DCAF7P61962 342 aa13.35□□□□□ -0.27
VAMP1-203ENST00000400911 NKX6-1P78426 367 aaPredicted RBP13.35□□□□□ -0.27
VAMP1-203ENST00000400911 IGLV3-21P80748 117 aaPredicted RBP13.35□□□□□ -0.27
VAMP1-203ENST00000400911 POU4F3Q15319 338 aa13.35□□□□□ -0.27
VAMP1-203ENST00000400911 PCBP2Q15366 365 aaKnown RBP eCLIP13.35□□□□□ -0.277e-8■□□□□ 9.2
VAMP1-203ENST00000400911 AP5B1Q2VPB7 878 aa13.35□□□□□ -0.27
VAMP1-203ENST00000400911 STEAP4Q687X5 459 aa13.35□□□□□ -0.27
VAMP1-203ENST00000400911 DND1Q8IYX4 353 aaKnown RBP13.35□□□□□ -0.27
VAMP1-203ENST00000400911 PDIK1LQ8N165 341 aa13.35□□□□□ -0.27
VAMP1-203ENST00000400911 C7orf57Q8NEG2 295 aa13.35□□□□□ -0.27
VAMP1-203ENST00000400911 FBXL20Q96IG2 436 aa13.35□□□□□ -0.27
VAMP1-203ENST00000400911 GAL3ST4Q96RP7 486 aa13.35□□□□□ -0.27
VAMP1-203ENST00000400911 TRIB1Q96RU8 372 aa13.35□□□□□ -0.27
VAMP1-203ENST00000400911 YIPF4Q9BSR8 244 aa13.35□□□□□ -0.27
VAMP1-203ENST00000400911 SORBS1Q9BX66 1292 aaKnown RBP13.35□□□□□ -0.27
VAMP1-203ENST00000400911 MS4A8Q9BY19 250 aa13.35□□□□□ -0.27
VAMP1-203ENST00000400911 RPF2Q9H7B2 306 aaKnown RBP13.35□□□□□ -0.27
VAMP1-203ENST00000400911 ZNF395Q9H8N7 513 aaPredicted RBP13.35□□□□□ -0.27
VAMP1-203ENST00000400911 CNOT10Q9H9A5 744 aaKnown RBP13.35□□□□□ -0.27
VAMP1-203ENST00000400911 CAMK2AQ9UQM7 478 aa13.35□□□□□ -0.27
VAMP1-203ENST00000400911 SLC6A5Q9Y345 797 aa13.35□□□□□ -0.27
VAMP1-203ENST00000400911 JRKLQ9Y4A0 524 aa13.35□□□□□ -0.27
VAMP1-203ENST00000400911 STK16O75716 305 aa13.34□□□□□ -0.27
VAMP1-203ENST00000400911 EPORP19235 508 aa13.34□□□□□ -0.27
VAMP1-203ENST00000400911 CD53P19397 219 aa13.34□□□□□ -0.27
VAMP1-203ENST00000400911 SSR2P43308 183 aa13.34□□□□□ -0.27
VAMP1-203ENST00000400911 HERVK_113P63132 956 aa13.34□□□□□ -0.27
VAMP1-203ENST00000400911 ERVK-8P63133 956 aa13.34□□□□□ -0.27
VAMP1-203ENST00000400911 IRF8Q02556 426 aa13.34□□□□□ -0.27
VAMP1-203ENST00000400911 SLAMF1Q13291 335 aa13.34□□□□□ -0.27
VAMP1-203ENST00000400911 LAPTM5Q13571 262 aa13.34□□□□□ -0.27
VAMP1-203ENST00000400911 NTRK2Q16620 822 aa13.34□□□□□ -0.27
VAMP1-203ENST00000400911 PDK4Q16654 411 aa13.34□□□□□ -0.27
VAMP1-203ENST00000400911 HIST2H2ACQ16777 129 aaPredicted RBP13.34□□□□□ -0.27
VAMP1-203ENST00000400911 TMEM35AQ53FP2 167 aa13.34□□□□□ -0.27
VAMP1-203ENST00000400911 PAGE2BQ5JRK9 111 aa13.34□□□□□ -0.27
VAMP1-203ENST00000400911 NSUN5P2Q63ZY6 315 aa13.34□□□□□ -0.27
VAMP1-203ENST00000400911 BICRALQ6AI39 1079 aa13.34□□□□□ -0.27
VAMP1-203ENST00000400911 VASNQ6EMK4 673 aa13.34□□□□□ -0.27
VAMP1-203ENST00000400911 HIST2H2AA3Q6FI13 130 aa13.34□□□□□ -0.27
VAMP1-203ENST00000400911 TMEM64Q6YI46 380 aa13.34□□□□□ -0.27
VAMP1-203ENST00000400911 SLC29A4Q7RTT9 530 aa13.34□□□□□ -0.27
VAMP1-203ENST00000400911 GPSM1Q86YR5 675 aa13.34□□□□□ -0.27
VAMP1-203ENST00000400911 PM20D2Q8IYS1 436 aa13.34□□□□□ -0.27
VAMP1-203ENST00000400911 TCAIMQ8N3R3 496 aa13.34□□□□□ -0.27
VAMP1-203ENST00000400911 BBOF1Q8ND07 529 aa13.34□□□□□ -0.27
VAMP1-203ENST00000400911 ZNF473Q8WTR7 871 aaKnown RBP13.34□□□□□ -0.27
VAMP1-203ENST00000400911 DIO2Q92813 273 aa13.34□□□□□ -0.27
VAMP1-203ENST00000400911 VPS39Q96JC1 886 aa13.34□□□□□ -0.27
VAMP1-203ENST00000400911 ART5Q96L15 291 aa13.34□□□□□ -0.27
VAMP1-203ENST00000400911 GNRHR2Q96P88 292 aa13.34□□□□□ -0.27
VAMP1-203ENST00000400911 KRT12Q99456 494 aa13.34□□□□□ -0.27
VAMP1-203ENST00000400911 MDFIQ99750 246 aa13.34□□□□□ -0.27
VAMP1-203ENST00000400911 EFCAB11Q9BUY7 163 aa13.34□□□□□ -0.27
VAMP1-203ENST00000400911 ERVK-6Q9BXR3 956 aa13.34□□□□□ -0.27
VAMP1-203ENST00000400911 DERL2Q9GZP9 239 aa13.34□□□□□ -0.27
VAMP1-203ENST00000400911 WWTR1Q9GZV5 400 aa13.34□□□□□ -0.27
VAMP1-203ENST00000400911 PRDM14Q9GZV8 571 aa13.34□□□□□ -0.27
VAMP1-203ENST00000400911 ERVK-19Q9WJR5 959 aa13.34□□□□□ -0.27
VAMP1-203ENST00000400911 TEX264Q9Y6I9 313 aa13.34□□□□□ -0.27
VAMP1-203ENST00000400911 GOLGA6L10A0A0M3HER8 536 aa13.33□□□□□ -0.28
VAMP1-203ENST00000400911 A0A1W2PPR1 153 aa13.33□□□□□ -0.28
VAMP1-203ENST00000400911 ANKRD33BA6NCL7 494 aa13.33□□□□□ -0.28
VAMP1-203ENST00000400911 CD8B2A6NJW9 211 aa13.33□□□□□ -0.28
VAMP1-203ENST00000400911 WASHC1A8K0Z3 465 aa13.33□□□□□ -0.28
VAMP1-203ENST00000400911 PRKRAO75569 313 aaKnown RBP13.33□□□□□ -0.28
VAMP1-203ENST00000400911 SCELO95171 688 aa13.33□□□□□ -0.28
VAMP1-203ENST00000400911 LY6G6DO95868 133 aa13.33□□□□□ -0.28
VAMP1-203ENST00000400911 HRGP04196 525 aa13.33□□□□□ -0.28
VAMP1-203ENST00000400911 HEXAP06865 529 aa13.33□□□□□ -0.28
VAMP1-203ENST00000400911 PCNAP12004 261 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms