RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 WASH2PQ6VEQ5 465 aa17.42■□□□□ 0.38
CHRFAM7A-202ENST00000397827 VMP1Q96GC9 406 aa17.42■□□□□ 0.38
CHRFAM7A-202ENST00000397827 PDXPQ96GD0 296 aa17.42■□□□□ 0.38
CHRFAM7A-202ENST00000397827 TMEM19Q96HH6 336 aa17.42■□□□□ 0.38
CHRFAM7A-202ENST00000397827 BTBD2Q9BX70 525 aa17.42■□□□□ 0.38
CHRFAM7A-202ENST00000397827 HDAC8Q9BY41 377 aa17.42■□□□□ 0.38
CHRFAM7A-202ENST00000397827 OSGEPL1Q9H4B0 414 aa17.42■□□□□ 0.38
CHRFAM7A-202ENST00000397827 IMPAD1Q9NX62 359 aa17.42■□□□□ 0.38
CHRFAM7A-202ENST00000397827 ZSCAN5BA6NJL1 495 aa17.42■□□□□ 0.38
CHRFAM7A-202ENST00000397827 C5orf58C9J3I9 102 aa17.42■□□□□ 0.38
CHRFAM7A-202ENST00000397827 CAPN5O15484 640 aaPredicted RBP17.42■□□□□ 0.38
CHRFAM7A-202ENST00000397827 LCMT2O60294 686 aaKnown RBP17.42■□□□□ 0.38
CHRFAM7A-202ENST00000397827 CCNB2O95067 398 aa17.42■□□□□ 0.38
CHRFAM7A-202ENST00000397827 GABRB1P18505 474 aa17.42■□□□□ 0.38
CHRFAM7A-202ENST00000397827 CTSKP43235 329 aa17.42■□□□□ 0.38
CHRFAM7A-202ENST00000397827 CCR8P51685 355 aa17.42■□□□□ 0.38
CHRFAM7A-202ENST00000397827 SAXO2Q658L1 398 aa17.42■□□□□ 0.38
CHRFAM7A-202ENST00000397827 SZRD1Q7Z422 152 aa17.42■□□□□ 0.38
CHRFAM7A-202ENST00000397827 TAGAPQ8N103 731 aa17.42■□□□□ 0.38
CHRFAM7A-202ENST00000397827 XKR8Q9H6D3 395 aa17.42■□□□□ 0.38
CHRFAM7A-202ENST00000397827 SERGEFQ9UGK8 458 aa17.42■□□□□ 0.38
CHRFAM7A-202ENST00000397827 DUSP12Q9UNI6 340 aa17.42■□□□□ 0.38
CHRFAM7A-202ENST00000397827 C2orf16Q68DN1 1984 aa17.42■□□□□ 0.38
CHRFAM7A-202ENST00000397827 C5orf67F2Z3F1 127 aa17.41■□□□□ 0.38
CHRFAM7A-202ENST00000397827 CDK1P06493 297 aa17.41■□□□□ 0.38
CHRFAM7A-202ENST00000397827 SLC35G4P0C7Q5 338 aa17.41■□□□□ 0.38
CHRFAM7A-202ENST00000397827 POU1F1P28069 291 aa17.41■□□□□ 0.38
CHRFAM7A-202ENST00000397827 HEPACAMQ14CZ8 416 aa17.41■□□□□ 0.38
CHRFAM7A-202ENST00000397827 TIGD6Q17RP2 521 aa17.41■□□□□ 0.38
CHRFAM7A-202ENST00000397827 LEXMQ3ZCV2 418 aa17.41■□□□□ 0.38
CHRFAM7A-202ENST00000397827 SPDYE7PQ495Y7 208 aa17.41■□□□□ 0.38
CHRFAM7A-202ENST00000397827 TANGO2Q6ICL3 276 aa17.41■□□□□ 0.38
CHRFAM7A-202ENST00000397827 ZNF784Q8NCA9 323 aaPredicted RBP17.41■□□□□ 0.38
CHRFAM7A-202ENST00000397827 MYDGFQ969H8 173 aa17.41■□□□□ 0.38
CHRFAM7A-202ENST00000397827 ZHX1-C8orf76Q96EF9 292 aa17.41■□□□□ 0.38
CHRFAM7A-202ENST00000397827 NEURL3Q96EH8 262 aa17.41■□□□□ 0.38
CHRFAM7A-202ENST00000397827 NMNAT1Q9HAN9 279 aaPredicted RBP17.41■□□□□ 0.38
CHRFAM7A-202ENST00000397827 PLCXD1Q9NUJ7 323 aa17.41■□□□□ 0.38
CHRFAM7A-202ENST00000397827 TAS2R16Q9NYV7 291 aa17.41■□□□□ 0.38
CHRFAM7A-202ENST00000397827 ZNF229Q9UJW7 825 aa17.41■□□□□ 0.38
CHRFAM7A-202ENST00000397827 CKAP5Q14008 2032 aa17.41■□□□□ 0.38
CHRFAM7A-202ENST00000397827 KIF26AQ9ULI4 1882 aaPredicted RBP17.41■□□□□ 0.38
CHRFAM7A-202ENST00000397827 TRBV4-1A0A0J9YWV2 114 aa17.41■□□□□ 0.38
CHRFAM7A-202ENST00000397827 PRR23AA6NEV1 266 aa17.41■□□□□ 0.38
CHRFAM7A-202ENST00000397827 BMP4P12644 408 aa17.41■□□□□ 0.38
CHRFAM7A-202ENST00000397827 ACP5P13686 325 aa17.41■□□□□ 0.38
CHRFAM7A-202ENST00000397827 RHCEP18577 417 aa17.41■□□□□ 0.38
CHRFAM7A-202ENST00000397827 PTGER1P34995 402 aa17.41■□□□□ 0.38
CHRFAM7A-202ENST00000397827 CLK1P49759 484 aaKnown RBP17.41■□□□□ 0.38
CHRFAM7A-202ENST00000397827 HMGA2P52926 109 aa17.41■□□□□ 0.38
CHRFAM7A-202ENST00000397827 TUBA1BP68363 451 aa17.41■□□□□ 0.38
CHRFAM7A-202ENST00000397827 TP53BP2Q13625 1128 aa17.41■□□□□ 0.38
CHRFAM7A-202ENST00000397827 MAPK11Q15759 364 aa17.41■□□□□ 0.38
CHRFAM7A-202ENST00000397827 KLHL17Q6TDP4 642 aa17.41■□□□□ 0.38
CHRFAM7A-202ENST00000397827 TUBA1AQ71U36 451 aa17.41■□□□□ 0.38
CHRFAM7A-202ENST00000397827 C6orf120Q7Z4R8 191 aa17.41■□□□□ 0.38
CHRFAM7A-202ENST00000397827 GPR32P1Q8NGA4 272 aa17.41■□□□□ 0.38
CHRFAM7A-202ENST00000397827 OR5P2Q8WZ92 322 aa17.41■□□□□ 0.38
CHRFAM7A-202ENST00000397827 SLC38A4Q969I6 547 aa17.41■□□□□ 0.38
CHRFAM7A-202ENST00000397827 SLIRPQ9GZT3 109 aaKnown RBP17.41■□□□□ 0.38
CHRFAM7A-202ENST00000397827 PELI2Q9HAT8 420 aa17.41■□□□□ 0.38
CHRFAM7A-202ENST00000397827 WASH6PQ9NQA3 447 aa17.41■□□□□ 0.38
CHRFAM7A-202ENST00000397827 MS4A12Q9NXJ0 267 aa17.41■□□□□ 0.38
CHRFAM7A-202ENST00000397827 DPP7Q9UHL4 492 aa17.41■□□□□ 0.38
CHRFAM7A-202ENST00000397827 CLDN24A6NM45 220 aa17.4■□□□□ 0.38
CHRFAM7A-202ENST00000397827 TAF4O00268 1085 aa17.4■□□□□ 0.38
CHRFAM7A-202ENST00000397827 SEMA7AO75326 666 aa17.4■□□□□ 0.38
CHRFAM7A-202ENST00000397827 SEMA3DO95025 777 aa17.4■□□□□ 0.38
CHRFAM7A-202ENST00000397827 PAK4O96013 591 aaPredicted RBP17.4■□□□□ 0.38
CHRFAM7A-202ENST00000397827 PRKCAP17252 672 aa17.4■□□□□ 0.38
CHRFAM7A-202ENST00000397827 IFNA8P32881 189 aa17.4■□□□□ 0.38
CHRFAM7A-202ENST00000397827 CRISP3P54108 245 aa17.4■□□□□ 0.38
CHRFAM7A-202ENST00000397827 COPZ1P61923 177 aa17.4■□□□□ 0.38
CHRFAM7A-202ENST00000397827 ST3GAL4Q11206 333 aa17.4■□□□□ 0.38
CHRFAM7A-202ENST00000397827 ARHGAP19Q14CB8 494 aa17.4■□□□□ 0.38
CHRFAM7A-202ENST00000397827 PLEKHG7Q6ZR37 379 aa17.4■□□□□ 0.38
CHRFAM7A-202ENST00000397827 PAGE2Q7Z2X7 111 aa17.4■□□□□ 0.38
CHRFAM7A-202ENST00000397827 SLC22A16Q86VW1 577 aa17.4■□□□□ 0.38
CHRFAM7A-202ENST00000397827 RBM45Q8IUH3 476 aaKnown RBP17.4■□□□□ 0.38
CHRFAM7A-202ENST00000397827 SMPDL3AQ92484 453 aa17.4■□□□□ 0.38
CHRFAM7A-202ENST00000397827 FERD3LQ96RJ6 166 aa17.4■□□□□ 0.38
CHRFAM7A-202ENST00000397827 MACROD1Q9BQ69 325 aa17.4■□□□□ 0.38
CHRFAM7A-202ENST00000397827 WFDC6Q9BQY6 131 aa17.4■□□□□ 0.38
CHRFAM7A-202ENST00000397827 NEK6Q9HC98 313 aa17.4■□□□□ 0.38
CHRFAM7A-202ENST00000397827 SIRT3Q9NTG7 399 aaPredicted RBP17.4■□□□□ 0.38
CHRFAM7A-202ENST00000397827 AIREO43918 545 aa17.4■□□□□ 0.38
CHRFAM7A-202ENST00000397827 RPN2P04844 631 aa17.4■□□□□ 0.38
CHRFAM7A-202ENST00000397827 CBLP22681 906 aa17.4■□□□□ 0.38
CHRFAM7A-202ENST00000397827 GADD45AP24522 165 aa17.4■□□□□ 0.38
CHRFAM7A-202ENST00000397827 PDGFRLQ15198 375 aa17.4■□□□□ 0.38
CHRFAM7A-202ENST00000397827 TBCEQ15813 527 aaPredicted RBP17.4■□□□□ 0.38
CHRFAM7A-202ENST00000397827 AGBL4Q5VU57 503 aa17.4■□□□□ 0.38
CHRFAM7A-202ENST00000397827 PSRC1Q6PGN9 363 aaPredicted RBP17.4■□□□□ 0.38
CHRFAM7A-202ENST00000397827 DEPDC4Q8N2C3 294 aa17.4■□□□□ 0.38
CHRFAM7A-202ENST00000397827 STX19Q8N4C7 294 aa17.4■□□□□ 0.38
CHRFAM7A-202ENST00000397827 OR6Q1Q8NGQ2 317 aa17.4■□□□□ 0.38
CHRFAM7A-202ENST00000397827 VANGL1Q8TAA9 524 aaPredicted RBP17.4■□□□□ 0.38
CHRFAM7A-202ENST00000397827 RAB7BQ96AH8 199 aa17.4■□□□□ 0.38
CHRFAM7A-202ENST00000397827 C12orf66Q96MD2 445 aa17.4■□□□□ 0.38
CHRFAM7A-202ENST00000397827 WDR12Q9GZL7 423 aaKnown RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms