RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 SMIM10Q96HG1 83 aa18.29■□□□□ 0.52
PDLIM2-204ENST00000397760 FBXL20Q96IG2 436 aa18.29■□□□□ 0.52
PDLIM2-204ENST00000397760 OR52E6Q96RD3 313 aa18.29■□□□□ 0.52
PDLIM2-204ENST00000397760 LRRN3Q9H3W5 708 aa18.29■□□□□ 0.52
PDLIM2-204ENST00000397760 REEP4Q9H6H4 257 aa18.29■□□□□ 0.52
PDLIM2-204ENST00000397760 STARD5Q9NSY2 213 aa18.29■□□□□ 0.52
PDLIM2-204ENST00000397760 SEMA5BQ9P283 1151 aa18.29■□□□□ 0.52
PDLIM2-204ENST00000397760 DNAJB9Q9UBS3 223 aa18.29■□□□□ 0.52
PDLIM2-204ENST00000397760 ATXN7L1Q9ULK2 861 aaPredicted RBP18.29■□□□□ 0.52
PDLIM2-204ENST00000397760 PLCL2Q9UPR0 1127 aa18.29■□□□□ 0.52
PDLIM2-204ENST00000397760 EXO1Q9UQ84 846 aaKnown RBP18.29■□□□□ 0.52
PDLIM2-204ENST00000397760 WBP11Q9Y2W2 641 aaKnown RBP18.29■□□□□ 0.52
PDLIM2-204ENST00000397760 A0A1W2PQM1 296 aa18.28■□□□□ 0.52
PDLIM2-204ENST00000397760 TRIM64BA6NI03 449 aa18.28■□□□□ 0.52
PDLIM2-204ENST00000397760 A8MU76 341 aa18.28■□□□□ 0.52
PDLIM2-204ENST00000397760 CTSBP07858 339 aa18.28■□□□□ 0.52
PDLIM2-204ENST00000397760 JUNBP17275 347 aaPredicted RBP18.28■□□□□ 0.52
PDLIM2-204ENST00000397760 GSTM5P46439 218 aa18.28■□□□□ 0.52
PDLIM2-204ENST00000397760 GABRA4P48169 554 aa18.28■□□□□ 0.52
PDLIM2-204ENST00000397760 TRA2BP62995 288 aaKnown RBP18.28■□□□□ 0.52
PDLIM2-204ENST00000397760 SNRPNP63162 240 aaKnown RBP18.28■□□□□ 0.52
PDLIM2-204ENST00000397760 PHC1P78364 1004 aa18.28■□□□□ 0.52
PDLIM2-204ENST00000397760 HSD11B2P80365 405 aa18.28■□□□□ 0.52
PDLIM2-204ENST00000397760 SLAMF1Q13291 335 aa18.28■□□□□ 0.52
PDLIM2-204ENST00000397760 SLC9A5Q14940 896 aa18.28■□□□□ 0.52
PDLIM2-204ENST00000397760 ANKRD26P1Q6NSI1 321 aa18.28■□□□□ 0.52
PDLIM2-204ENST00000397760 TMEM214Q6NUQ4 689 aaKnown RBP18.28■□□□□ 0.52
PDLIM2-204ENST00000397760 ABHD13Q7L211 337 aa18.28■□□□□ 0.52
PDLIM2-204ENST00000397760 PRSS42Q7Z5A4 293 aa18.28■□□□□ 0.52
PDLIM2-204ENST00000397760 CLVS1Q8IUQ0 354 aaPredicted RBP18.28■□□□□ 0.52
PDLIM2-204ENST00000397760 FAM81AQ8TBF8 368 aa18.28■□□□□ 0.52
PDLIM2-204ENST00000397760 MAGIXQ9H6Y5 334 aa18.28■□□□□ 0.52
PDLIM2-204ENST00000397760 CXorf21Q9HAI6 301 aa18.28■□□□□ 0.52
PDLIM2-204ENST00000397760 ATP6V1HQ9UI12 483 aa18.28■□□□□ 0.52
PDLIM2-204ENST00000397760 GPR179Q6PRD1 2367 aa18.28■□□□□ 0.52
PDLIM2-204ENST00000397760 CDX4O14627 284 aaPredicted RBP18.28■□□□□ 0.52
PDLIM2-204ENST00000397760 FLRT2O43155 660 aa18.28■□□□□ 0.52
PDLIM2-204ENST00000397760 SNAP29O95721 258 aa18.28■□□□□ 0.52
PDLIM2-204ENST00000397760 CPNE6O95741 557 aa18.28■□□□□ 0.52
PDLIM2-204ENST00000397760 LDOC1O95751 146 aaPredicted RBP18.28■□□□□ 0.52
PDLIM2-204ENST00000397760 ALPLP05186 524 aa18.28■□□□□ 0.52
PDLIM2-204ENST00000397760 KIR3DL1P43629 444 aa18.28■□□□□ 0.52
PDLIM2-204ENST00000397760 MTPNP58546 118 aa18.28■□□□□ 0.52
PDLIM2-204ENST00000397760 SPEM2Q0P670 501 aa18.28■□□□□ 0.52
PDLIM2-204ENST00000397760 RBM48Q5RL73 367 aaKnown RBP18.28■□□□□ 0.52
PDLIM2-204ENST00000397760 CPTPQ5TA50 214 aa18.28■□□□□ 0.52
PDLIM2-204ENST00000397760 TTC23Q5W5X9 447 aa18.28■□□□□ 0.52
PDLIM2-204ENST00000397760 OR4F3Q6IEY1 312 aa18.28■□□□□ 0.52
PDLIM2-204ENST00000397760 R3HCC1LQ7Z5L2 792 aaKnown RBP18.28■□□□□ 0.52
PDLIM2-204ENST00000397760 ZCCHC7Q8N3Z6 543 aaKnown RBP18.28■□□□□ 0.52
PDLIM2-204ENST00000397760 B4GALNT2Q8NHY0 566 aa18.28■□□□□ 0.52
PDLIM2-204ENST00000397760 RHBDD1Q8TEB9 315 aa18.28■□□□□ 0.52
PDLIM2-204ENST00000397760 SDCCAG3Q96C92 435 aa18.28■□□□□ 0.52
PDLIM2-204ENST00000397760 ROGDIQ9GZN7 287 aa18.28■□□□□ 0.52
PDLIM2-204ENST00000397760 SYNDIG1Q9H7V2 258 aa18.28■□□□□ 0.52
PDLIM2-204ENST00000397760 USE1Q9NZ43 259 aa18.28■□□□□ 0.52
PDLIM2-204ENST00000397760 VAPAQ9P0L0 249 aa18.28■□□□□ 0.52
PDLIM2-204ENST00000397760 SH3BP4Q9P0V3 963 aa18.28■□□□□ 0.52
PDLIM2-204ENST00000397760 ERN1O75460 977 aaKnown RBP18.27■□□□□ 0.52
PDLIM2-204ENST00000397760 FURINP09958 794 aa18.27■□□□□ 0.52
PDLIM2-204ENST00000397760 THRBP10828 461 aa18.27■□□□□ 0.52
PDLIM2-204ENST00000397760 LAMP1P11279 417 aa18.27■□□□□ 0.52
PDLIM2-204ENST00000397760 ALOX12P18054 663 aa18.27■□□□□ 0.52
PDLIM2-204ENST00000397760 CERS1P27544 350 aa18.27■□□□□ 0.52
PDLIM2-204ENST00000397760 RPL3P39023 403 aaKnown RBP18.27■□□□□ 0.52
PDLIM2-204ENST00000397760 PLIN5Q00G26 463 aa18.27■□□□□ 0.52
PDLIM2-204ENST00000397760 TUBA3CQ13748 450 aa18.27■□□□□ 0.52
PDLIM2-204ENST00000397760 SELPLGQ14242 412 aa18.27■□□□□ 0.52
PDLIM2-204ENST00000397760 KCNAB1Q14722 419 aa18.27■□□□□ 0.52
PDLIM2-204ENST00000397760 HEPACAMQ14CZ8 416 aa18.27■□□□□ 0.52
PDLIM2-204ENST00000397760 DEFB134Q4QY38 66 aa18.27■□□□□ 0.52
PDLIM2-204ENST00000397760 RUNDC3AQ59EK9 446 aa18.27■□□□□ 0.52
PDLIM2-204ENST00000397760 TMPRSS9Q7Z410 1059 aa18.27■□□□□ 0.52
PDLIM2-204ENST00000397760 ZDHHC13Q8IUH4 622 aa18.27■□□□□ 0.52
PDLIM2-204ENST00000397760 DRAXINQ8NBI3 349 aaPredicted RBP18.27■□□□□ 0.52
PDLIM2-204ENST00000397760 OR8J2Q8NGG1 315 aa18.27■□□□□ 0.52
PDLIM2-204ENST00000397760 TMBIM1Q969X1 311 aa18.27■□□□□ 0.52
PDLIM2-204ENST00000397760 COQ8BQ96D53 544 aa18.27■□□□□ 0.52
PDLIM2-204ENST00000397760 OCEL1Q9H607 264 aa18.27■□□□□ 0.52
PDLIM2-204ENST00000397760 USP22Q9UPT9 525 aa18.27■□□□□ 0.52
PDLIM2-204ENST00000397760 MRPS2Q9Y399 296 aaKnown RBP18.27■□□□□ 0.52
PDLIM2-204ENST00000397760 GMEB1Q9Y692 573 aa18.27■□□□□ 0.52
PDLIM2-204ENST00000397760 MDC1Q14676 2089 aaKnown RBP18.27■□□□□ 0.51
PDLIM2-204ENST00000397760 MYO15AQ9UKN7 3530 aa18.26■□□□□ 0.51
PDLIM2-204ENST00000397760 ELOVL7A1L3X0 281 aa18.26■□□□□ 0.51
PDLIM2-204ENST00000397760 GSTA4O15217 222 aa18.26■□□□□ 0.51
PDLIM2-204ENST00000397760 PDE7AQ13946 482 aa18.26■□□□□ 0.51
PDLIM2-204ENST00000397760 PRTGQ2VWP7 1150 aa18.26■□□□□ 0.51
PDLIM2-204ENST00000397760 MRM1Q6IN84 353 aaKnown RBP18.26■□□□□ 0.51
PDLIM2-204ENST00000397760 ZNF773Q6PK81 442 aa18.26■□□□□ 0.51
PDLIM2-204ENST00000397760 ZNF574Q6ZN55 896 aaPredicted RBP18.26■□□□□ 0.51
PDLIM2-204ENST00000397760 CAMKMTQ7Z624 323 aa18.26■□□□□ 0.51
PDLIM2-204ENST00000397760 KMT5CQ86Y97 462 aa18.26■□□□□ 0.51
PDLIM2-204ENST00000397760 MMP21Q8N119 569 aa18.26■□□□□ 0.51
PDLIM2-204ENST00000397760 KLHL6Q8WZ60 621 aa18.26■□□□□ 0.51
PDLIM2-204ENST00000397760 ATOH1Q92858 354 aaPredicted RBP18.26■□□□□ 0.51
PDLIM2-204ENST00000397760 C12orf43Q96C57 262 aaKnown RBP18.26■□□□□ 0.51
PDLIM2-204ENST00000397760 PPCDCQ96CD2 204 aa18.26■□□□□ 0.51
PDLIM2-204ENST00000397760 MTERF3Q96E29 417 aa18.26■□□□□ 0.51
PDLIM2-204ENST00000397760 SLC41A2Q96JW4 573 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms