RNA–Protein interactions for RNA: ENST00000396595.7

LIMCH1-203, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-203ENST00000396595 CRISP1P54107 249 aa9.84□□□□□ -0.83
LIMCH1-203ENST00000396595 PIGFQ07326 219 aa9.84□□□□□ -0.83
LIMCH1-203ENST00000396595 FGL1Q08830 312 aa9.84□□□□□ -0.83
LIMCH1-203ENST00000396595 GLT8D1Q68CQ7 371 aa9.84□□□□□ -0.83
LIMCH1-203ENST00000396595 C14orf80Q86SX3 495 aa9.84□□□□□ -0.83
LIMCH1-203ENST00000396595 OR2T33Q8NG76 320 aa9.84□□□□□ -0.83
LIMCH1-203ENST00000396595 SLC41A3Q96GZ6 507 aa9.84□□□□□ -0.83
LIMCH1-203ENST00000396595 CNTNAP3BQ96NU0 1288 aa9.84□□□□□ -0.83
LIMCH1-203ENST00000396595 ZFR2Q9UPR6 939 aaKnown RBP9.84□□□□□ -0.83
LIMCH1-203ENST00000396595 FER1L4A9Z1Z3 1794 aa9.84□□□□□ -0.83
LIMCH1-203ENST00000396595 ABCC6O95255 1503 aa9.84□□□□□ -0.83
LIMCH1-203ENST00000396595 TEX13CA0A0J9YWL9 993 aa9.84□□□□□ -0.83
LIMCH1-203ENST00000396595 CAPN14A8MX76 684 aa9.84□□□□□ -0.83
LIMCH1-203ENST00000396595 FANCGO15287 622 aa9.84□□□□□ -0.83
LIMCH1-203ENST00000396595 RBBP9O75884 186 aa9.84□□□□□ -0.83
LIMCH1-203ENST00000396595 ARHGEF15O94989 841 aa9.84□□□□□ -0.83
LIMCH1-203ENST00000396595 CKMT1AP12532 417 aa9.84□□□□□ -0.83
LIMCH1-203ENST00000396595 BMP2P12643 396 aa9.84□□□□□ -0.83
LIMCH1-203ENST00000396595 PPP5CP53041 499 aa9.84□□□□□ -0.83
LIMCH1-203ENST00000396595 OR4D2P58180 307 aa9.84□□□□□ -0.83
LIMCH1-203ENST00000396595 DYRK1AQ13627 763 aa9.84□□□□□ -0.83
LIMCH1-203ENST00000396595 ZNF550Q7Z398 422 aa9.84□□□□□ -0.83
LIMCH1-203ENST00000396595 CD99L2Q8TCZ2 262 aa9.84□□□□□ -0.83
LIMCH1-203ENST00000396595 HCAR2Q8TDS4 363 aa9.84□□□□□ -0.83
LIMCH1-203ENST00000396595 OVCA2Q8WZ82 227 aa9.84□□□□□ -0.83
LIMCH1-203ENST00000396595 ZNF486Q96H40 463 aaPredicted RBP9.84□□□□□ -0.83
LIMCH1-203ENST00000396595 OR14A2Q96R54 314 aa9.84□□□□□ -0.83
LIMCH1-203ENST00000396595 MTMR11A4FU01 709 aa9.84□□□□□ -0.83
LIMCH1-203ENST00000396595 TSPAN15O95858 294 aa9.84□□□□□ -0.83
LIMCH1-203ENST00000396595 IFNA1P01562 189 aa9.84□□□□□ -0.83
LIMCH1-203ENST00000396595 CDKN1CP49918 316 aaPredicted RBP9.84□□□□□ -0.83
LIMCH1-203ENST00000396595 GALNT1Q10472 559 aaPredicted RBP9.84□□□□□ -0.83
LIMCH1-203ENST00000396595 NFATC3Q12968 1075 aa9.84□□□□□ -0.83
LIMCH1-203ENST00000396595 CLVS2Q5SYC1 327 aa9.84□□□□□ -0.83
LIMCH1-203ENST00000396595 GDF6Q6KF10 455 aaPredicted RBP9.84□□□□□ -0.83
LIMCH1-203ENST00000396595 PHOSPHO1Q8TCT1 267 aa9.84□□□□□ -0.83
LIMCH1-203ENST00000396595 MYRFLQ96LU7 910 aa9.84□□□□□ -0.83
LIMCH1-203ENST00000396595 LIPT1Q9Y234 373 aa9.84□□□□□ -0.83
LIMCH1-203ENST00000396595 A0A1B0GVT2 93 aa9.84□□□□□ -0.83
LIMCH1-203ENST00000396595 PRSS44E7EML9 344 aa9.84□□□□□ -0.83
LIMCH1-203ENST00000396595 F5H0A9 414 aaPredicted RBP9.84□□□□□ -0.83
LIMCH1-203ENST00000396595 BLOC1S5-TXNDC5H3BN57 136 aa9.84□□□□□ -0.83
LIMCH1-203ENST00000396595 RFPL2O75678 378 aa9.84□□□□□ -0.83
LIMCH1-203ENST00000396595 HCKP08631 526 aa9.84□□□□□ -0.83
LIMCH1-203ENST00000396595 C8orf89P0DMQ9 161 aa9.84□□□□□ -0.83
LIMCH1-203ENST00000396595 IVDP26440 423 aa9.84□□□□□ -0.83
LIMCH1-203ENST00000396595 MLLT3P42568 568 aaPredicted RBP9.84□□□□□ -0.83
LIMCH1-203ENST00000396595 PREPP48147 710 aa9.84□□□□□ -0.83
LIMCH1-203ENST00000396595 IDH3GP51553 393 aaPredicted RBP9.84□□□□□ -0.83
LIMCH1-203ENST00000396595 RING1Q06587 406 aa9.84□□□□□ -0.83
LIMCH1-203ENST00000396595 SIX1Q15475 284 aaPredicted RBP9.84□□□□□ -0.83
LIMCH1-203ENST00000396595 ALG10Q5BKT4 473 aa9.84□□□□□ -0.83
LIMCH1-203ENST00000396595 KCTD9Q7L273 389 aa9.84□□□□□ -0.83
LIMCH1-203ENST00000396595 ZNF565Q8N9K5 539 aa9.84□□□□□ -0.83
LIMCH1-203ENST00000396595 C14orf119Q9NWQ9 140 aa9.84□□□□□ -0.83
LIMCH1-203ENST00000396595 WASHC1A8K0Z3 465 aa9.83□□□□□ -0.84
LIMCH1-203ENST00000396595 A8MVJ9 347 aa9.83□□□□□ -0.84
LIMCH1-203ENST00000396595 WASH3PC4AMC7 463 aa9.83□□□□□ -0.84
LIMCH1-203ENST00000396595 K7EPK0 472 aa9.83□□□□□ -0.84
LIMCH1-203ENST00000396595 LCMT2O60294 686 aaKnown RBP9.83□□□□□ -0.84
LIMCH1-203ENST00000396595 MMP20O60882 483 aa9.83□□□□□ -0.84
LIMCH1-203ENST00000396595 C1GALT1C1LP0DN25 315 aa9.83□□□□□ -0.84
LIMCH1-203ENST00000396595 RHCEP18577 417 aa9.83□□□□□ -0.84
LIMCH1-203ENST00000396595 HK3P52790 923 aa9.83□□□□□ -0.84
LIMCH1-203ENST00000396595 NKX2-5P52952 324 aaPredicted RBP9.83□□□□□ -0.84
LIMCH1-203ENST00000396595 SCGB2A2Q13296 93 aa9.83□□□□□ -0.84
LIMCH1-203ENST00000396595 WASH2PQ6VEQ5 465 aa9.83□□□□□ -0.84
LIMCH1-203ENST00000396595 KBTBD6Q86V97 674 aa9.83□□□□□ -0.84
LIMCH1-203ENST00000396595 FAM71E2Q8N5Q1 922 aa9.83□□□□□ -0.84
LIMCH1-203ENST00000396595 KRTCAP2Q8N6L1 136 aa9.83□□□□□ -0.84
LIMCH1-203ENST00000396595 TMEM41AQ96HV5 264 aa9.83□□□□□ -0.84
LIMCH1-203ENST00000396595 TXLNGYQ9BZA5 131 aa9.83□□□□□ -0.84
LIMCH1-203ENST00000396595 FOLH1BQ9HBA9 442 aa9.83□□□□□ -0.84
LIMCH1-203ENST00000396595 EBF1Q9UH73 591 aa9.83□□□□□ -0.84
LIMCH1-203ENST00000396595 SLC35F4A4IF30 521 aa9.83□□□□□ -0.84
LIMCH1-203ENST00000396595 A8MUA0 341 aa9.83□□□□□ -0.84
LIMCH1-203ENST00000396595 SOCS2O14508 198 aa9.83□□□□□ -0.84
LIMCH1-203ENST00000396595 EEF1E1O43324 174 aaKnown RBP9.83□□□□□ -0.84
LIMCH1-203ENST00000396595 PDYNP01213 254 aa9.83□□□□□ -0.84
LIMCH1-203ENST00000396595 MBP02144 154 aa9.83□□□□□ -0.84
LIMCH1-203ENST00000396595 PROS1P07225 676 aa9.83□□□□□ -0.84
LIMCH1-203ENST00000396595 STSP08842 583 aa9.83□□□□□ -0.84
LIMCH1-203ENST00000396595 GKN3PP0CG01 181 aa9.83□□□□□ -0.84
LIMCH1-203ENST00000396595 TMEM115Q12893 351 aaPredicted RBP9.83□□□□□ -0.84
LIMCH1-203ENST00000396595 CTU1Q7Z7A3 348 aaKnown RBP9.83□□□□□ -0.84
LIMCH1-203ENST00000396595 OR7G1Q8NGA0 311 aa9.83□□□□□ -0.84
LIMCH1-203ENST00000396595 CASTOR1Q8WTX7 329 aa9.83□□□□□ -0.84
LIMCH1-203ENST00000396595 PNPLA2Q96AD5 504 aa9.83□□□□□ -0.84
LIMCH1-203ENST00000396595 C7orf34Q96L11 122 aa9.83□□□□□ -0.84
LIMCH1-203ENST00000396595 RBP7Q96R05 134 aa9.83□□□□□ -0.84
LIMCH1-203ENST00000396595 STUB1Q9UNE7 303 aa9.83□□□□□ -0.84
LIMCH1-203ENST00000396595 TEX51A0A1B0GUA7 166 aa9.83□□□□□ -0.84
LIMCH1-203ENST00000396595 GRID2O43424 1007 aa9.83□□□□□ -0.84
LIMCH1-203ENST00000396595 RGS9O75916 674 aaPredicted RBP9.83□□□□□ -0.84
LIMCH1-203ENST00000396595 F2P00734 622 aa9.83□□□□□ -0.84
LIMCH1-203ENST00000396595 CD97P48960 835 aa9.83□□□□□ -0.84
LIMCH1-203ENST00000396595 CLDN8P56748 225 aa9.83□□□□□ -0.84
LIMCH1-203ENST00000396595 PLEKHN1Q494U1 663 aaPredicted RBP9.83□□□□□ -0.84
LIMCH1-203ENST00000396595 ETFRF1Q6IPR1 90 aa9.83□□□□□ -0.84
LIMCH1-203ENST00000396595 SUSD1Q6UWL2 747 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms