RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 PTTG1O95997 202 aa13.42□□□□□ -0.26
COL4A3-202ENST00000396578 OR12D1P0DN82 309 aa13.42□□□□□ -0.26
COL4A3-202ENST00000396578 PER3P56645 1201 aa13.42□□□□□ -0.26
COL4A3-202ENST00000396578 FKBP1BP68106 108 aa13.42□□□□□ -0.26
COL4A3-202ENST00000396578 CYCSP99999 105 aaKnown RBP13.42□□□□□ -0.26
COL4A3-202ENST00000396578 SPHARQ15513 63 aa13.42□□□□□ -0.26
COL4A3-202ENST00000396578 AGTRAPQ6RW13 159 aa13.42□□□□□ -0.26
COL4A3-202ENST00000396578 TFGQ92734 400 aaPredicted RBP13.42□□□□□ -0.26
COL4A3-202ENST00000396578 SH3YL1Q96HL8 342 aaPredicted RBP13.42□□□□□ -0.26
COL4A3-202ENST00000396578 TSGA13Q96PP4 275 aa13.42□□□□□ -0.26
COL4A3-202ENST00000396578 OR14A2Q96R54 314 aa13.42□□□□□ -0.26
COL4A3-202ENST00000396578 CLEC4EQ9ULY5 219 aa13.42□□□□□ -0.26
COL4A3-202ENST00000396578 ATRNL1Q5VV63 1379 aa13.42□□□□□ -0.26
COL4A3-202ENST00000396578 MSX1P28360 303 aa13.42□□□□□ -0.26
COL4A3-202ENST00000396578 NIPAL4Q0D2K0 466 aa13.42□□□□□ -0.26
COL4A3-202ENST00000396578 RBM12BQ8IXT5 1001 aaKnown RBP13.42□□□□□ -0.26
COL4A3-202ENST00000396578 HMGB4Q8WW32 186 aa13.42□□□□□ -0.26
COL4A3-202ENST00000396578 OR51B5Q9H339 312 aa13.42□□□□□ -0.26
COL4A3-202ENST00000396578 ASF1BQ9NVP2 202 aa13.42□□□□□ -0.26
COL4A3-202ENST00000396578 SERTAD3Q9UJW9 196 aa13.42□□□□□ -0.26
COL4A3-202ENST00000396578 GLOD5A6NK44 160 aa13.42□□□□□ -0.26
COL4A3-202ENST00000396578 SYNGR4O95473 234 aa13.42□□□□□ -0.26
COL4A3-202ENST00000396578 LEPRP48357 1165 aaKnown RBP13.42□□□□□ -0.26
COL4A3-202ENST00000396578 SOX9P48436 509 aa13.42□□□□□ -0.26
COL4A3-202ENST00000396578 RIDAP52758 137 aaKnown RBP13.42□□□□□ -0.26
COL4A3-202ENST00000396578 MLC1Q15049 377 aa13.42□□□□□ -0.26
COL4A3-202ENST00000396578 EXOC3L2Q2M3D2 409 aa13.42□□□□□ -0.26
COL4A3-202ENST00000396578 PTCHD3Q3KNS1 767 aa13.42□□□□□ -0.26
COL4A3-202ENST00000396578 RAB41Q5JT25 222 aa13.42□□□□□ -0.26
COL4A3-202ENST00000396578 CNN2Q99439 309 aaKnown RBP13.42□□□□□ -0.26
COL4A3-202ENST00000396578 PLAGL1Q9UM63 463 aa13.42□□□□□ -0.26
COL4A3-202ENST00000396578 F7P08709 466 aaPredicted RBP13.42□□□□□ -0.26
COL4A3-202ENST00000396578 RAC2P15153 192 aa13.42□□□□□ -0.26
COL4A3-202ENST00000396578 GGT5P36269 586 aa13.42□□□□□ -0.26
COL4A3-202ENST00000396578 C3P1Q6ZMU1 363 aa13.42□□□□□ -0.26
COL4A3-202ENST00000396578 SLC45A3Q96JT2 553 aa13.42□□□□□ -0.26
COL4A3-202ENST00000396578 KCNH6Q9H252 994 aa13.42□□□□□ -0.26
COL4A3-202ENST00000396578 ZNF395Q9H8N7 513 aaPredicted RBP13.42□□□□□ -0.26
COL4A3-202ENST00000396578 POPDC3Q9HBV1 291 aa13.42□□□□□ -0.26
COL4A3-202ENST00000396578 POT1Q9NUX5 634 aa13.42□□□□□ -0.26
COL4A3-202ENST00000396578 SLC2A6Q9UGQ3 507 aa13.42□□□□□ -0.26
COL4A3-202ENST00000396578 ADAM18Q9Y3Q7 739 aa13.42□□□□□ -0.26
COL4A3-202ENST00000396578 ASB3Q9Y575 518 aa13.42□□□□□ -0.26
COL4A3-202ENST00000396578 CIB4A0PJX0 185 aa13.42□□□□□ -0.26
COL4A3-202ENST00000396578 BOLA2-SMG1P6H3BVE0 249 aa13.42□□□□□ -0.26
COL4A3-202ENST00000396578 ACVR1BP36896 505 aa13.42□□□□□ -0.26
COL4A3-202ENST00000396578 STC1P52823 247 aa13.42□□□□□ -0.26
COL4A3-202ENST00000396578 PPP5CP53041 499 aa13.42□□□□□ -0.26
COL4A3-202ENST00000396578 PPIGQ13427 754 aaKnown RBP eCLIP13.42□□□□□ -0.26
COL4A3-202ENST00000396578 RAB11BQ15907 218 aa13.42□□□□□ -0.26
COL4A3-202ENST00000396578 TPGS2Q68CL5 300 aa13.42□□□□□ -0.26
COL4A3-202ENST00000396578 OR5T1Q8NG75 326 aa13.42□□□□□ -0.26
COL4A3-202ENST00000396578 SH3RF2Q8TEC5 729 aa13.42□□□□□ -0.26
COL4A3-202ENST00000396578 ZNF382Q96SR6 550 aa13.42□□□□□ -0.26
COL4A3-202ENST00000396578 POP7O75817 140 aaKnown RBP13.42□□□□□ -0.26
COL4A3-202ENST00000396578 PABPC4LP0CB38 370 aaKnown RBP13.42□□□□□ -0.26
COL4A3-202ENST00000396578 PRKCAP17252 672 aa13.42□□□□□ -0.26
COL4A3-202ENST00000396578 GPR143P51810 404 aa13.42□□□□□ -0.26
COL4A3-202ENST00000396578 PON2Q15165 354 aa13.42□□□□□ -0.26
COL4A3-202ENST00000396578 SLC36A3Q495N2 470 aa13.42□□□□□ -0.26
COL4A3-202ENST00000396578 OR4K1Q8NGD4 311 aa13.42□□□□□ -0.26
COL4A3-202ENST00000396578 ZFP57Q9NU63 452 aa13.42□□□□□ -0.26
COL4A3-202ENST00000396578 UBR1Q8IWV7 1749 aa13.42□□□□□ -0.26
COL4A3-202ENST00000396578 A8MU76 341 aa13.41□□□□□ -0.26
COL4A3-202ENST00000396578 FMO6PO60774 539 aa13.41□□□□□ -0.26
COL4A3-202ENST00000396578 STT3AP46977 705 aa13.41□□□□□ -0.26
COL4A3-202ENST00000396578 IDH3GP51553 393 aaPredicted RBP13.41□□□□□ -0.26
COL4A3-202ENST00000396578 SLC25A11Q02978 314 aaKnown RBP13.41□□□□□ -0.26
COL4A3-202ENST00000396578 BCL2L15Q5TBC7 163 aa13.41□□□□□ -0.26
COL4A3-202ENST00000396578 SYPL2Q5VXT5 272 aa13.41□□□□□ -0.26
COL4A3-202ENST00000396578 PNCKQ6P2M8 343 aa13.41□□□□□ -0.26
COL4A3-202ENST00000396578 PRSS55Q6UWB4 352 aaPredicted RBP13.41□□□□□ -0.26
COL4A3-202ENST00000396578 SLC9B2Q86UD5 537 aa13.41□□□□□ -0.26
COL4A3-202ENST00000396578 ZDHHC14Q8IZN3 488 aa13.41□□□□□ -0.26
COL4A3-202ENST00000396578 KREMEN2Q8NCW0 462 aa13.41□□□□□ -0.26
COL4A3-202ENST00000396578 FAM118AQ9NWS6 357 aa13.41□□□□□ -0.26
COL4A3-202ENST00000396578 VNN1O95497 513 aa13.41□□□□□ -0.26
COL4A3-202ENST00000396578 FAM110CQ1W6H9 321 aa13.41□□□□□ -0.26
COL4A3-202ENST00000396578 C2orf27AQ580R0 203 aa13.41□□□□□ -0.26
COL4A3-202ENST00000396578 ELP2Q6IA86 826 aa13.41□□□□□ -0.26
COL4A3-202ENST00000396578 CFAP77Q6ZQR2 320 aa13.41□□□□□ -0.26
COL4A3-202ENST00000396578 WDR53Q7Z5U6 358 aaPredicted RBP13.41□□□□□ -0.26
COL4A3-202ENST00000396578 TXNDC5Q8NBS9 432 aaKnown RBP13.41□□□□□ -0.26
COL4A3-202ENST00000396578 MGLLQ99685 303 aa13.41□□□□□ -0.26
COL4A3-202ENST00000396578 SLC22A31A6NKX4 558 aa13.41□□□□□ -0.26
COL4A3-202ENST00000396578 ADRB3P13945 408 aa13.41□□□□□ -0.26
COL4A3-202ENST00000396578 SOWAHAQ2M3V2 549 aa13.41□□□□□ -0.26
COL4A3-202ENST00000396578 TMPPEQ6ZT21 453 aa13.41□□□□□ -0.26
COL4A3-202ENST00000396578 TRIM46Q7Z4K8 759 aa13.41□□□□□ -0.26
COL4A3-202ENST00000396578 KLBQ86Z14 1044 aa13.41□□□□□ -0.26
COL4A3-202ENST00000396578 DTX3Q8N9I9 347 aa13.41□□□□□ -0.26
COL4A3-202ENST00000396578 NSUN3Q9H649 340 aaKnown RBP13.41□□□□□ -0.26
COL4A3-202ENST00000396578 CCM2LQ9NUG4 571 aaPredicted RBP13.41□□□□□ -0.26
COL4A3-202ENST00000396578 GNG13Q9P2W3 67 aa13.41□□□□□ -0.26
COL4A3-202ENST00000396578 ACSL6Q9UKU0 697 aa13.41□□□□□ -0.26
COL4A3-202ENST00000396578 YARS2Q9Y2Z4 477 aaKnown RBP13.41□□□□□ -0.26
COL4A3-202ENST00000396578 URB1O60287 2271 aaKnown RBP13.41□□□□□ -0.26
COL4A3-202ENST00000396578 HTR1EP28566 365 aa13.41□□□□□ -0.26
COL4A3-202ENST00000396578 LRIT3Q3SXY7 679 aa13.41□□□□□ -0.26
COL4A3-202ENST00000396578 UBE2UQ5VVX9 321 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms