RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 MYH15Q9Y2K3 1946 aa16.48■□□□□ 0.23
SIN3A-203ENST00000394949 EIF3FO00303 357 aaPredicted RBP16.48■□□□□ 0.23
SIN3A-203ENST00000394949 JRKO75564 520 aa16.48■□□□□ 0.23
SIN3A-203ENST00000394949 CYB5AP00167 134 aa16.48■□□□□ 0.23
SIN3A-203ENST00000394949 MTNR1AP48039 350 aa16.48■□□□□ 0.23
SIN3A-203ENST00000394949 ARSDP51689 593 aa16.48■□□□□ 0.23
SIN3A-203ENST00000394949 TBCEQ15813 527 aaPredicted RBP16.48■□□□□ 0.23
SIN3A-203ENST00000394949 USF2Q15853 346 aaPredicted RBP16.48■□□□□ 0.23
SIN3A-203ENST00000394949 Q6ZVU0 165 aa16.48■□□□□ 0.23
SIN3A-203ENST00000394949 VTCN1Q7Z7D3 282 aa16.48■□□□□ 0.23
SIN3A-203ENST00000394949 FTMTQ8N4E7 242 aa16.48■□□□□ 0.23
SIN3A-203ENST00000394949 OR52N2Q8NGI0 321 aa16.48■□□□□ 0.23
SIN3A-203ENST00000394949 OR8K5Q8NH50 307 aa16.48■□□□□ 0.23
SIN3A-203ENST00000394949 TBC1D15Q8TC07 691 aa16.48■□□□□ 0.23
SIN3A-203ENST00000394949 TMEM184CQ9NVA4 438 aa16.48■□□□□ 0.23
SIN3A-203ENST00000394949 TAS2R8Q9NYW2 309 aa16.48■□□□□ 0.23
SIN3A-203ENST00000394949 TEX13CA0A0J9YWL9 993 aa16.48■□□□□ 0.23
SIN3A-203ENST00000394949 SCAMP2O15127 329 aaKnown RBP16.48■□□□□ 0.23
SIN3A-203ENST00000394949 PFKMP08237 780 aa16.48■□□□□ 0.23
SIN3A-203ENST00000394949 ACRV1P26436 265 aa16.48■□□□□ 0.23
SIN3A-203ENST00000394949 SNRPD2P62316 118 aaKnown RBP16.48■□□□□ 0.23
SIN3A-203ENST00000394949 MICAQ29983 383 aa16.48■□□□□ 0.23
SIN3A-203ENST00000394949 ZNF101Q8IZC7 436 aa16.48■□□□□ 0.23
SIN3A-203ENST00000394949 SUN3Q8TAQ9 357 aa16.48■□□□□ 0.23
SIN3A-203ENST00000394949 DPH2Q9BQC3 489 aaPredicted RBP16.48■□□□□ 0.23
SIN3A-203ENST00000394949 NDUFS4O43181 175 aa16.48■□□□□ 0.23
SIN3A-203ENST00000394949 GBAP04062 536 aa16.48■□□□□ 0.23
SIN3A-203ENST00000394949 C1GALT1C1LP0DN25 315 aa16.48■□□□□ 0.23
SIN3A-203ENST00000394949 CXCR1P25024 350 aa16.48■□□□□ 0.23
SIN3A-203ENST00000394949 PGGT1BP53609 377 aa16.48■□□□□ 0.23
SIN3A-203ENST00000394949 ERVPABLB-1P60509 514 aa16.48■□□□□ 0.23
SIN3A-203ENST00000394949 ACTA2P62736 377 aa16.48■□□□□ 0.23
SIN3A-203ENST00000394949 ACTG2P63267 376 aa16.48■□□□□ 0.23
SIN3A-203ENST00000394949 S100A12P80511 92 aa16.48■□□□□ 0.23
SIN3A-203ENST00000394949 UBXN2BQ14CS0 331 aa16.48■□□□□ 0.23
SIN3A-203ENST00000394949 ENPP7Q6UWV6 458 aa16.48■□□□□ 0.23
SIN3A-203ENST00000394949 ZBTB20Q9HC78 741 aaPredicted RBP16.48■□□□□ 0.23
SIN3A-203ENST00000394949 NPAP1Q9NZP6 1156 aa16.48■□□□□ 0.23
SIN3A-203ENST00000394949 PCDHB14Q9Y5E9 798 aa16.48■□□□□ 0.23
SIN3A-203ENST00000394949 MEIOCA2RUB1 952 aa16.48■□□□□ 0.23
SIN3A-203ENST00000394949 PSMD9O00233 223 aa16.48■□□□□ 0.23
SIN3A-203ENST00000394949 AQP9O43315 295 aa16.48■□□□□ 0.23
SIN3A-203ENST00000394949 CDC40O60508 579 aaKnown RBP eCLIP16.48■□□□□ 0.232e-9■■□□□ 13.5
SIN3A-203ENST00000394949 GTF2F2P13984 249 aa16.48■□□□□ 0.23
SIN3A-203ENST00000394949 GNSP15586 552 aa16.48■□□□□ 0.23
SIN3A-203ENST00000394949 CNR2P34972 360 aa16.48■□□□□ 0.23
SIN3A-203ENST00000394949 FGFBP1Q14512 234 aa16.48■□□□□ 0.23
SIN3A-203ENST00000394949 WDR45BQ5MNZ6 344 aa16.48■□□□□ 0.23
SIN3A-203ENST00000394949 ZNF691Q5VV52 312 aa16.48■□□□□ 0.23
SIN3A-203ENST00000394949 PLAG1Q6DJT9 500 aa16.48■□□□□ 0.23
SIN3A-203ENST00000394949 TSTD1Q8NFU3 115 aa16.48■□□□□ 0.23
SIN3A-203ENST00000394949 PGAP3Q96FM1 320 aaPredicted RBP16.48■□□□□ 0.23
SIN3A-203ENST00000394949 INSL5Q9Y5Q6 135 aa16.48■□□□□ 0.23
SIN3A-203ENST00000394949 C7orf72A4D263 438 aa16.47■□□□□ 0.23
SIN3A-203ENST00000394949 SLC35F4A4IF30 521 aa16.47■□□□□ 0.23
SIN3A-203ENST00000394949 PRAF2O60831 178 aa16.47■□□□□ 0.23
SIN3A-203ENST00000394949 SNAI1O95863 264 aaPredicted RBP16.47■□□□□ 0.23
SIN3A-203ENST00000394949 GGT2P36268 569 aa16.47■□□□□ 0.23
SIN3A-203ENST00000394949 GAS6Q14393 721 aa16.47■□□□□ 0.23
SIN3A-203ENST00000394949 TMEM102Q8N9M5 508 aaPredicted RBP16.47■□□□□ 0.23
SIN3A-203ENST00000394949 GPR150Q8NGU9 434 aa16.47■□□□□ 0.23
SIN3A-203ENST00000394949 MAFIPQ8WZ33 124 aa16.47■□□□□ 0.23
SIN3A-203ENST00000394949 OVCA2Q8WZ82 227 aa16.47■□□□□ 0.23
SIN3A-203ENST00000394949 MUL1Q969V5 352 aa16.47■□□□□ 0.23
SIN3A-203ENST00000394949 PCYT2Q99447 389 aa16.47■□□□□ 0.23
SIN3A-203ENST00000394949 ZNF700Q9H0M5 742 aa16.47■□□□□ 0.23
SIN3A-203ENST00000394949 CNOT2Q9NZN8 540 aaKnown RBP16.47■□□□□ 0.23
SIN3A-203ENST00000394949 SIGLEC1Q9BZZ2 1709 aa16.47■□□□□ 0.23
SIN3A-203ENST00000394949 LINC00299Q6ZSB3 139 aa16.47■□□□□ 0.23
SIN3A-203ENST00000394949 SPRED1Q7Z699 444 aa16.47■□□□□ 0.23
SIN3A-203ENST00000394949 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.47■□□□□ 0.232e-7■■■■□ 24.8
SIN3A-203ENST00000394949 TMEM185BQ9H7F4 350 aa16.47■□□□□ 0.23
SIN3A-203ENST00000394949 BEST1O76090 585 aa16.47■□□□□ 0.23
SIN3A-203ENST00000394949 EIF2S3P41091 472 aaKnown RBP16.47■□□□□ 0.23
SIN3A-203ENST00000394949 RPS5P46782 204 aaKnown RBP16.47■□□□□ 0.23
SIN3A-203ENST00000394949 BTN3A2P78410 334 aa16.47■□□□□ 0.23
SIN3A-203ENST00000394949 SNTA1Q13424 505 aa16.47■□□□□ 0.23
SIN3A-203ENST00000394949 SLC35F1Q5T1Q4 408 aa16.47■□□□□ 0.23
SIN3A-203ENST00000394949 KCTD9Q7L273 389 aa16.47■□□□□ 0.23
SIN3A-203ENST00000394949 NPWQ8N729 165 aa16.47■□□□□ 0.23
SIN3A-203ENST00000394949 NT5DC2Q9H857 520 aa16.47■□□□□ 0.23
SIN3A-203ENST00000394949 Q9N2J8 555 aa16.47■□□□□ 0.23
SIN3A-203ENST00000394949 ABI3Q9P2A4 366 aa16.47■□□□□ 0.23
SIN3A-203ENST00000394949 NUBP2Q9Y5Y2 271 aa16.47■□□□□ 0.23
SIN3A-203ENST00000394949 UNC119BA6NIH7 251 aa16.47■□□□□ 0.23
SIN3A-203ENST00000394949 CDK1P06493 297 aa16.47■□□□□ 0.23
SIN3A-203ENST00000394949 GJA1P17302 382 aa16.47■□□□□ 0.23
SIN3A-203ENST00000394949 CD68P34810 354 aaPredicted RBP16.47■□□□□ 0.23
SIN3A-203ENST00000394949 EIF2DP41214 584 aaKnown RBP16.47■□□□□ 0.23
SIN3A-203ENST00000394949 WNT4P56705 351 aa16.47■□□□□ 0.23
SIN3A-203ENST00000394949 SPCS2Q15005 226 aa16.47■□□□□ 0.23
SIN3A-203ENST00000394949 TCEAL6Q6IPX3 200 aa16.47■□□□□ 0.23
SIN3A-203ENST00000394949 C22orf39Q6P5X5 142 aa16.47■□□□□ 0.23
SIN3A-203ENST00000394949 CTU1Q7Z7A3 348 aaKnown RBP16.47■□□□□ 0.23
SIN3A-203ENST00000394949 KLBQ86Z14 1044 aa16.47■□□□□ 0.23
SIN3A-203ENST00000394949 LOC285095A0A1B0GVY8 99 aa16.46■□□□□ 0.23
SIN3A-203ENST00000394949 SOX30O94993 753 aa16.46■□□□□ 0.23
SIN3A-203ENST00000394949 SOD2P04179 222 aa16.46■□□□□ 0.23
SIN3A-203ENST00000394949 GCGRP47871 477 aa16.46■□□□□ 0.23
SIN3A-203ENST00000394949 CLCNKAP51800 687 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms