RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 CAPN5O15484 640 aaPredicted RBP15.37■□□□□ 0.05
PCDH1-203ENST00000394536 ERI3O43414 337 aaKnown RBP15.37■□□□□ 0.05
PCDH1-203ENST00000394536 VNN2O95498 520 aa15.37■□□□□ 0.05
PCDH1-203ENST00000394536 ACP5P13686 325 aa15.37■□□□□ 0.05
PCDH1-203ENST00000394536 GGTA1PQ4G0N0 100 aa15.37■□□□□ 0.05
PCDH1-203ENST00000394536 LAIR1Q6GTX8 287 aa15.37■□□□□ 0.05
PCDH1-203ENST00000394536 NXPE4Q6UWF7 544 aa15.37■□□□□ 0.05
PCDH1-203ENST00000394536 FAM20CQ8IXL6 584 aa15.37■□□□□ 0.05
PCDH1-203ENST00000394536 CDK20Q8IZL9 346 aa15.37■□□□□ 0.05
PCDH1-203ENST00000394536 TRAM1L1Q8N609 369 aa15.37■□□□□ 0.05
PCDH1-203ENST00000394536 NEDD4LQ96PU5 975 aa15.37■□□□□ 0.05
PCDH1-203ENST00000394536 ASIC5Q9NY37 505 aa15.37■□□□□ 0.05
PCDH1-203ENST00000394536 ASCC3Q8N3C0 2202 aaKnown RBP15.37■□□□□ 0.05
PCDH1-203ENST00000394536 TGM5O43548 720 aa15.37■□□□□ 0.05
PCDH1-203ENST00000394536 YES1P07947 543 aa15.37■□□□□ 0.05
PCDH1-203ENST00000394536 OSMP13725 252 aa15.37■□□□□ 0.05
PCDH1-203ENST00000394536 PRG2P13727 222 aa15.37■□□□□ 0.05
PCDH1-203ENST00000394536 KELP23276 732 aa15.37■□□□□ 0.05
PCDH1-203ENST00000394536 CDH11P55287 796 aa15.37■□□□□ 0.05
PCDH1-203ENST00000394536 NTHL1P78549 312 aa15.37■□□□□ 0.05
PCDH1-203ENST00000394536 FAM46CQ5VWP2 391 aa15.37■□□□□ 0.05
PCDH1-203ENST00000394536 NUDT13Q86X67 352 aa15.37■□□□□ 0.05
PCDH1-203ENST00000394536 FAM129CQ86XR2 697 aa15.37■□□□□ 0.05
PCDH1-203ENST00000394536 OR10H4Q8NGA5 316 aa15.37■□□□□ 0.05
PCDH1-203ENST00000394536 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.37■□□□□ 0.05
PCDH1-203ENST00000394536 ZNF566Q969W8 418 aa15.37■□□□□ 0.05
PCDH1-203ENST00000394536 C12orf66Q96MD2 445 aa15.37■□□□□ 0.05
PCDH1-203ENST00000394536 DEC1Q9P2X7 70 aa15.37■□□□□ 0.05
PCDH1-203ENST00000394536 A0A1B0GVC2 190 aa15.37■□□□□ 0.05
PCDH1-203ENST00000394536 A6NIN4 97 aa15.37■□□□□ 0.05
PCDH1-203ENST00000394536 GAPDHSO14556 408 aaPredicted RBP15.37■□□□□ 0.05
PCDH1-203ENST00000394536 YY2O15391 372 aa15.37■□□□□ 0.05
PCDH1-203ENST00000394536 CD22P20273 847 aa15.37■□□□□ 0.05
PCDH1-203ENST00000394536 RPS19P39019 145 aaKnown RBP15.37■□□□□ 0.05
PCDH1-203ENST00000394536 HOXC5Q00444 222 aa15.37■□□□□ 0.05
PCDH1-203ENST00000394536 SGCGQ13326 291 aa15.37■□□□□ 0.05
PCDH1-203ENST00000394536 EIF4HQ15056 248 aaKnown RBP15.37■□□□□ 0.05
PCDH1-203ENST00000394536 PAQR6Q6TCH4 344 aa15.37■□□□□ 0.05
PCDH1-203ENST00000394536 HSDL2Q6YN16 418 aa15.37■□□□□ 0.05
PCDH1-203ENST00000394536 SYNPOQ8N3V7 929 aa15.37■□□□□ 0.05
PCDH1-203ENST00000394536 OR5AR1Q8NGP9 310 aa15.37■□□□□ 0.05
PCDH1-203ENST00000394536 RASSF5Q8WWW0 418 aa15.37■□□□□ 0.05
PCDH1-203ENST00000394536 NECTIN4Q96NY8 510 aa15.37■□□□□ 0.05
PCDH1-203ENST00000394536 NELL2Q99435 816 aa15.37■□□□□ 0.05
PCDH1-203ENST00000394536 TTTY10Q9BZA0 68 aa15.37■□□□□ 0.05
PCDH1-203ENST00000394536 EIF3FO00303 357 aaPredicted RBP15.36■□□□□ 0.05
PCDH1-203ENST00000394536 PRNPP04156 253 aa15.36■□□□□ 0.05
PCDH1-203ENST00000394536 CLEC2LP0C7M8 214 aa15.36■□□□□ 0.05
PCDH1-203ENST00000394536 CPN2P22792 545 aa15.36■□□□□ 0.05
PCDH1-203ENST00000394536 SMSP52788 366 aa15.36■□□□□ 0.05
PCDH1-203ENST00000394536 FCHO2Q0JRZ9 810 aa15.36■□□□□ 0.05
PCDH1-203ENST00000394536 TRIM71Q2Q1W2 868 aaKnown RBP15.36■□□□□ 0.05
PCDH1-203ENST00000394536 FAM26DQ5JW98 314 aa15.36■□□□□ 0.05
PCDH1-203ENST00000394536 C10orf53Q8N6V4 93 aa15.36■□□□□ 0.05
PCDH1-203ENST00000394536 PRR14Q9BWN1 585 aa15.36■□□□□ 0.05
PCDH1-203ENST00000394536 DMRT3Q9NQL9 472 aa15.36■□□□□ 0.05
PCDH1-203ENST00000394536 UCKL1Q9NWZ5 548 aa15.36■□□□□ 0.05
PCDH1-203ENST00000394536 PRKAG2Q9UGJ0 569 aa15.36■□□□□ 0.05
PCDH1-203ENST00000394536 PRAMEF4O60810 478 aa15.36■□□□□ 0.05
PCDH1-203ENST00000394536 SAGP10523 405 aaPredicted RBP15.36■□□□□ 0.05
PCDH1-203ENST00000394536 SLC6A12P48065 614 aa15.36■□□□□ 0.05
PCDH1-203ENST00000394536 ZNF805Q5CZA5 627 aa15.36■□□□□ 0.05
PCDH1-203ENST00000394536 PRAMEF9Q5VWM5 478 aa15.36■□□□□ 0.05
PCDH1-203ENST00000394536 Q8N402 240 aa15.36■□□□□ 0.05
PCDH1-203ENST00000394536 LRRC17Q8N6Y2 441 aa15.36■□□□□ 0.05
PCDH1-203ENST00000394536 HORMAD2Q8N7B1 307 aa15.36■□□□□ 0.05
PCDH1-203ENST00000394536 BEX1Q9HBH7 125 aa15.36■□□□□ 0.05
PCDH1-203ENST00000394536 OSGIN1Q9UJX0 560 aa15.36■□□□□ 0.05
PCDH1-203ENST00000394536 MEIOCA2RUB1 952 aa15.36■□□□□ 0.05
PCDH1-203ENST00000394536 MAGEA2P43356 314 aa15.36■□□□□ 0.05
PCDH1-203ENST00000394536 MRPL19P49406 292 aaKnown RBP15.36■□□□□ 0.05
PCDH1-203ENST00000394536 ZNF91Q05481 1191 aa15.36■□□□□ 0.05
PCDH1-203ENST00000394536 TGM3Q08188 693 aa15.36■□□□□ 0.05
PCDH1-203ENST00000394536 MTAPQ13126 283 aa15.36■□□□□ 0.05
PCDH1-203ENST00000394536 RAB33AQ14088 237 aa15.36■□□□□ 0.05
PCDH1-203ENST00000394536 SYPL1Q16563 259 aa15.36■□□□□ 0.05
PCDH1-203ENST00000394536 ZNF311Q5JNZ3 666 aa15.36■□□□□ 0.05
PCDH1-203ENST00000394536 OR2A12Q8NGT7 310 aa15.36■□□□□ 0.05
PCDH1-203ENST00000394536 SMPDL3AQ92484 453 aa15.36■□□□□ 0.05
PCDH1-203ENST00000394536 SPATA9Q9BWV2 254 aa15.36■□□□□ 0.05
PCDH1-203ENST00000394536 SPHK2Q9NRA0 654 aa15.36■□□□□ 0.05
PCDH1-203ENST00000394536 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.36■□□□□ 0.05
PCDH1-203ENST00000394536 STUB1Q9UNE7 303 aa15.36■□□□□ 0.05
PCDH1-203ENST00000394536 PADI2Q9Y2J8 665 aa15.36■□□□□ 0.05
PCDH1-203ENST00000394536 ZNF780BQ9Y6R6 833 aa15.36■□□□□ 0.05
PCDH1-203ENST00000394536 SSX4O60224 188 aa15.35■□□□□ 0.05
PCDH1-203ENST00000394536 UGDHO60701 494 aa15.35■□□□□ 0.05
PCDH1-203ENST00000394536 CCR8P51685 355 aa15.35■□□□□ 0.05
PCDH1-203ENST00000394536 ARL9Q6T311 187 aa15.35■□□□□ 0.05
PCDH1-203ENST00000394536 YAF2Q8IY57 180 aa15.35■□□□□ 0.05
PCDH1-203ENST00000394536 OR52L1Q8NGH7 329 aa15.35■□□□□ 0.05
PCDH1-203ENST00000394536 TCEAL4Q96EI5 215 aa15.35■□□□□ 0.05
PCDH1-203ENST00000394536 PPP1R16AQ96I34 528 aa15.35■□□□□ 0.05
PCDH1-203ENST00000394536 OR51I1Q9H343 314 aa15.35■□□□□ 0.05
PCDH1-203ENST00000394536 MAT2BQ9NZL9 334 aa15.35■□□□□ 0.05
PCDH1-203ENST00000394536 CNIH4Q9P003 139 aa15.35■□□□□ 0.05
PCDH1-203ENST00000394536 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.35■□□□□ 0.05
PCDH1-203ENST00000394536 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.35■□□□□ 0.05
PCDH1-203ENST00000394536 TRIM64A6NGJ6 449 aa15.35■□□□□ 0.05
PCDH1-203ENST00000394536 CD8B2A6NJW9 211 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms