RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 KCNAB2Q13303 367 aa6.33□□□□□ -1.4
UBBP1-201ENST00000392399 RFTN2Q52LD8 501 aaPredicted RBP6.33□□□□□ -1.4
UBBP1-201ENST00000392399 C6orf136Q5SQH8 315 aa6.33□□□□□ -1.4
UBBP1-201ENST00000392399 AGAP7PQ5VUJ5 663 aa6.33□□□□□ -1.4
UBBP1-201ENST00000392399 C18orf63Q68DL7 685 aa6.33□□□□□ -1.4
UBBP1-201ENST00000392399 TCTN3Q6NUS6 607 aa6.33□□□□□ -1.4
UBBP1-201ENST00000392399 PAPD4Q6PIY7 484 aaKnown RBP6.33□□□□□ -1.4
UBBP1-201ENST00000392399 RGS9BPQ6ZS82 235 aa6.33□□□□□ -1.4
UBBP1-201ENST00000392399 LANCL3Q6ZV70 420 aa6.33□□□□□ -1.4
UBBP1-201ENST00000392399 TMEM151BQ8IW70 566 aa6.33□□□□□ -1.4
UBBP1-201ENST00000392399 WDR75Q8IWA0 830 aaKnown RBP6.33□□□□□ -1.4
UBBP1-201ENST00000392399 SHISA5Q8N114 240 aa6.33□□□□□ -1.4
UBBP1-201ENST00000392399 NATD1Q8N6N6 113 aa6.33□□□□□ -1.4
UBBP1-201ENST00000392399 OR2T11Q8NH01 316 aa6.33□□□□□ -1.4
UBBP1-201ENST00000392399 OR14A16Q8NHC5 309 aa6.33□□□□□ -1.4
UBBP1-201ENST00000392399 PIWIL2Q8TC59 973 aaKnown RBP6.33□□□□□ -1.4
UBBP1-201ENST00000392399 ELP5Q8TE02 316 aa6.33□□□□□ -1.4
UBBP1-201ENST00000392399 C16orf78Q8WTQ4 265 aa6.33□□□□□ -1.4
UBBP1-201ENST00000392399 TSLPQ969D9 159 aa6.33□□□□□ -1.4
UBBP1-201ENST00000392399 TUBGCP3Q96CW5 907 aa6.33□□□□□ -1.4
UBBP1-201ENST00000392399 MTERF3Q96E29 417 aa6.33□□□□□ -1.4
UBBP1-201ENST00000392399 C19orf60Q96EN9 201 aa6.33□□□□□ -1.4
UBBP1-201ENST00000392399 ZNF764Q96H86 408 aaPredicted RBP6.33□□□□□ -1.4
UBBP1-201ENST00000392399 ART5Q96L15 291 aa6.33□□□□□ -1.4
UBBP1-201ENST00000392399 MAGEB18Q96M61 343 aa6.33□□□□□ -1.4
UBBP1-201ENST00000392399 AGAP4Q96P64 663 aa6.33□□□□□ -1.4
UBBP1-201ENST00000392399 DGAT2Q96PD7 388 aa6.33□□□□□ -1.4
UBBP1-201ENST00000392399 LMF1Q96S06 567 aa6.33□□□□□ -1.4
UBBP1-201ENST00000392399 SLC25A23Q9BV35 468 aa6.33□□□□□ -1.4
UBBP1-201ENST00000392399 TMUB1Q9BVT8 246 aa6.33□□□□□ -1.4
UBBP1-201ENST00000392399 CCDC134Q9H6E4 229 aa6.33□□□□□ -1.4
UBBP1-201ENST00000392399 ZNF395Q9H8N7 513 aaPredicted RBP6.33□□□□□ -1.4
UBBP1-201ENST00000392399 ZNF160Q9HCG1 818 aa6.33□□□□□ -1.4
UBBP1-201ENST00000392399 MMP25Q9NPA2 562 aa6.33□□□□□ -1.4
UBBP1-201ENST00000392399 MYNNQ9NPC7 610 aa6.33□□□□□ -1.4
UBBP1-201ENST00000392399 PNO1Q9NRX1 252 aaKnown RBP6.33□□□□□ -1.4
UBBP1-201ENST00000392399 TEX10Q9NXF1 929 aaPredicted RBP6.33□□□□□ -1.4
UBBP1-201ENST00000392399 ASIC5Q9NY37 505 aa6.33□□□□□ -1.4
UBBP1-201ENST00000392399 GPR83Q9NYM4 423 aa6.33□□□□□ -1.4
UBBP1-201ENST00000392399 TEKT2Q9UIF3 430 aa6.33□□□□□ -1.4
UBBP1-201ENST00000392399 CES1P1Q9UKY3 287 aa6.33□□□□□ -1.4
UBBP1-201ENST00000392399 PPIEQ9UNP9 301 aaKnown RBP6.33□□□□□ -1.4
UBBP1-201ENST00000392399 MAPRE3Q9UPY8 281 aa6.33□□□□□ -1.4
UBBP1-201ENST00000392399 EIF3LQ9Y262 564 aaKnown RBP6.33□□□□□ -1.4
UBBP1-201ENST00000392399 DLGAP4Q9Y2H0 992 aa6.33□□□□□ -1.4
UBBP1-201ENST00000392399 CLDN16Q9Y5I7 305 aa6.33□□□□□ -1.4
UBBP1-201ENST00000392399 ZNF780BQ9Y6R6 833 aa6.33□□□□□ -1.4
UBBP1-201ENST00000392399 ATP6AP2A0A1C7CYW4 349 aa6.32□□□□□ -1.4
UBBP1-201ENST00000392399 ATXN7O15265 892 aaPredicted RBP6.32□□□□□ -1.4
UBBP1-201ENST00000392399 FGF17O60258 216 aa6.32□□□□□ -1.4
UBBP1-201ENST00000392399 OR10H2O60403 315 aa6.32□□□□□ -1.4
UBBP1-201ENST00000392399 TBX19O60806 448 aa6.32□□□□□ -1.4
UBBP1-201ENST00000392399 PEX11AO75192 247 aa6.32□□□□□ -1.4
UBBP1-201ENST00000392399 SKAP2O75563 359 aaPredicted RBP6.32□□□□□ -1.4
UBBP1-201ENST00000392399 ATP6AP2O75787 350 aa6.32□□□□□ -1.4
UBBP1-201ENST00000392399 SEC24DO94855 1032 aaPredicted RBP6.32□□□□□ -1.4
UBBP1-201ENST00000392399 SLITRK5O94991 958 aa6.32□□□□□ -1.4
UBBP1-201ENST00000392399 IL3P08700 152 aa6.32□□□□□ -1.4
UBBP1-201ENST00000392399 BCKDHAP12694 445 aa6.32□□□□□ -1.4
UBBP1-201ENST00000392399 CSNK2A2P19784 350 aaPredicted RBP6.32□□□□□ -1.4
UBBP1-201ENST00000392399 DDCP20711 480 aa6.32□□□□□ -1.4
UBBP1-201ENST00000392399 ITGA3P26006 1051 aa6.32□□□□□ -1.4
UBBP1-201ENST00000392399 MPIP34949 423 aa6.32□□□□□ -1.4
UBBP1-201ENST00000392399 CLCN2P51788 898 aa6.32□□□□□ -1.4
UBBP1-201ENST00000392399 GPR143P51810 404 aa6.32□□□□□ -1.4
UBBP1-201ENST00000392399 XKP51811 444 aa6.32□□□□□ -1.4
UBBP1-201ENST00000392399 RPL38P63173 70 aaKnown RBP6.32□□□□□ -1.4
UBBP1-201ENST00000392399 CBX1P83916 185 aa6.32□□□□□ -1.4
UBBP1-201ENST00000392399 CHAF1BQ13112 559 aa6.32□□□□□ -1.4
UBBP1-201ENST00000392399 CEBPEQ15744 281 aa6.32□□□□□ -1.4
UBBP1-201ENST00000392399 PDCD2Q16342 344 aaPredicted RBP6.32□□□□□ -1.4
UBBP1-201ENST00000392399 SPRED3Q2MJR0 410 aa6.32□□□□□ -1.4
UBBP1-201ENST00000392399 BTBD16Q32M84 506 aa6.32□□□□□ -1.4
UBBP1-201ENST00000392399 GALNTL6Q49A17 601 aa6.32□□□□□ -1.4
UBBP1-201ENST00000392399 CRB2Q5IJ48 1285 aa6.32□□□□□ -1.4
UBBP1-201ENST00000392399 VWA5B1Q5TIE3 1220 aa6.32□□□□□ -1.4
UBBP1-201ENST00000392399 CPZQ66K79 652 aa6.32□□□□□ -1.4
UBBP1-201ENST00000392399 FAM71E1Q6IPT2 247 aa6.32□□□□□ -1.4
UBBP1-201ENST00000392399 H3F3CQ6NXT2 135 aa6.32□□□□□ -1.4
UBBP1-201ENST00000392399 R3HCC1LQ7Z5L2 792 aaKnown RBP6.32□□□□□ -1.4
UBBP1-201ENST00000392399 CLNKQ7Z7G1 428 aa6.32□□□□□ -1.4
UBBP1-201ENST00000392399 OR4N5Q8IXE1 308 aa6.32□□□□□ -1.4
UBBP1-201ENST00000392399 LGI4Q8N135 537 aa6.32□□□□□ -1.4
UBBP1-201ENST00000392399 FNDC5Q8NAU1 212 aa6.32□□□□□ -1.4
UBBP1-201ENST00000392399 NFAM1Q8NET5 270 aaPredicted RBP6.32□□□□□ -1.4
UBBP1-201ENST00000392399 B3GNT7Q8NFL0 401 aa6.32□□□□□ -1.4
UBBP1-201ENST00000392399 FDCSPQ8NFU4 85 aa6.32□□□□□ -1.4
UBBP1-201ENST00000392399 OR8K3Q8NH51 312 aa6.32□□□□□ -1.4
UBBP1-201ENST00000392399 PTPMT1Q8WUK0 201 aaPredicted RBP6.32□□□□□ -1.4
UBBP1-201ENST00000392399 TM9SF4Q92544 642 aa6.32□□□□□ -1.4
UBBP1-201ENST00000392399 ERP27Q96DN0 273 aa6.32□□□□□ -1.4
UBBP1-201ENST00000392399 VMP1Q96GC9 406 aa6.32□□□□□ -1.4
UBBP1-201ENST00000392399 ABHD17AQ96GS6 310 aa6.32□□□□□ -1.4
UBBP1-201ENST00000392399 THOC3Q96J01 351 aaKnown RBP6.32□□□□□ -1.4
UBBP1-201ENST00000392399 ZNF354BQ96LW1 612 aa6.32□□□□□ -1.4
UBBP1-201ENST00000392399 C3orf30Q96M34 536 aa6.32□□□□□ -1.4
UBBP1-201ENST00000392399 PRPF18Q99633 342 aaKnown RBP6.32□□□□□ -1.4
UBBP1-201ENST00000392399 SMAD5Q99717 465 aaKnown RBP6.32□□□□□ -1.4
UBBP1-201ENST00000392399 TRIM55Q9BYV6 548 aa6.32□□□□□ -1.4
UBBP1-201ENST00000392399 SLC25A18Q9H1K4 315 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms