RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 MSANTD1Q6ZTZ1 278 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 ZNF573Q86YE8 665 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 LSMEM2Q8N112 164 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 CYP4Z2PQ8N1L4 340 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 OR8K3Q8NH51 312 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 SPPL2AQ8TCT8 520 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 GTF2H4Q92759 462 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 PINX1Q96BK5 328 aaKnown RBP5.49□□□□□ -1.53
RFC1-202ENST00000381897 C12orf66Q96MD2 445 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 ACOX2Q99424 681 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 ACOT13Q9NPJ3 140 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 EXD2Q9NVH0 621 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 IL19Q9UHD0 177 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 OSGIN1Q9UJX0 560 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 ABCG2Q9UNQ0 655 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 GINS2Q9Y248 185 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 MAB21L2Q9Y586 359 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 IRAK3Q9Y616 596 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 DOT1LQ8TEK3 1739 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 C5orf58C9J3I9 102 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 SUV39H1O43463 412 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 KLF4O43474 513 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 CYP7B1O75881 506 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 C1RP00736 705 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 C9P02748 559 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 ZNF888P0CJ79 500 aaPredicted RBP5.49□□□□□ -1.53
RFC1-202ENST00000381897 TGFB3P10600 412 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 OGNP20774 298 aaKnown RBP5.49□□□□□ -1.53
RFC1-202ENST00000381897 MAOBP27338 520 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 CCR1P32246 355 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 RAB2AP61019 212 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 RPL38P63173 70 aaKnown RBP5.49□□□□□ -1.53
RFC1-202ENST00000381897 TARDBPQ13148 414 aaKnown RBP eCLIP5.49□□□□□ -1.53
RFC1-202ENST00000381897 BEX5Q5H9J7 111 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 VARS2Q5ST30 1063 aaKnown RBP5.49□□□□□ -1.53
RFC1-202ENST00000381897 MBNL2Q5VZF2 373 aaKnown RBP5.49□□□□□ -1.53
RFC1-202ENST00000381897 RTL6Q6ICC9 239 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 ERN2Q76MJ5 926 aaKnown RBP5.49□□□□□ -1.53
RFC1-202ENST00000381897 SSX6Q7RTT6 188 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 ADAMTSL2Q86TH1 951 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 STK40Q8N2I9 435 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 LSMEM1Q8N8F7 131 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 CLRN3Q8NCR9 226 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 CADM4Q8NFZ8 388 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 NACC2Q96BF6 587 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 ZNF668Q96K58 619 aaPredicted RBP5.49□□□□□ -1.53
RFC1-202ENST00000381897 SPATA33Q96N06 139 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 C20orf24Q9BUV8 137 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 CINPQ9BW66 212 aaPredicted RBP5.49□□□□□ -1.53
RFC1-202ENST00000381897 UCK2Q9BZX2 261 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 FOLH1BQ9HBA9 442 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 NDFIP2Q9NV92 336 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 SLC2A8Q9NY64 477 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 CACNG4Q9UBN1 327 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 ZNF112Q9UJU3 913 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 HS3ST4Q9Y661 456 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 DDX60LQ5H9U9 1706 aaKnown RBP5.49□□□□□ -1.53
RFC1-202ENST00000381897 HS3ST1O14792 307 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 SGCEO43556 437 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 CREG1O75629 220 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 SPDEFO95238 335 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 ITGB1P05556 798 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 CTSHP09668 335 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 RPS3P23396 243 aaKnown RBP eCLIP5.49□□□□□ -1.53
RFC1-202ENST00000381897 STOMP27105 288 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 UQCRC1P31930 480 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 MAP2K3P46734 347 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 CDC34P49427 236 aaPredicted RBP5.49□□□□□ -1.53
RFC1-202ENST00000381897 CAMPP49913 170 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 RRADP55042 308 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 ODF1Q14990 250 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 RAB30Q15771 203 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 TTLL9Q3SXZ7 439 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 FAM182AQ5T1J6 154 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 MARC1Q5VT66 337 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 CENPVQ7Z7K6 275 aaPredicted RBP5.49□□□□□ -1.53
RFC1-202ENST00000381897 ZFAND4Q86XD8 727 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 SNX29P2Q8IUI4 249 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 CNTN4Q8IWV2 1026 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 BOLLQ8N9W6 283 aaKnown RBP5.49□□□□□ -1.53
RFC1-202ENST00000381897 NHLRC2Q8NBF2 726 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 RHBDD1Q8TEB9 315 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 ASB12Q8WXK4 309 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 ELMO1Q92556 727 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 KAT2AQ92830 837 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 KHSRPQ92945 711 aaKnown RBP eCLIP5.49□□□□□ -1.536e-7■■■■□ 21.8
RFC1-202ENST00000381897 APH1AQ96BI3 265 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 YIPF6Q96EC8 236 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 RAX2Q96IS3 184 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 CELF6Q96J87 481 aaKnown RBP5.49□□□□□ -1.53
RFC1-202ENST00000381897 ADAD1Q96M93 576 aaKnown RBP5.49□□□□□ -1.53
RFC1-202ENST00000381897 CCDC115Q96NT0 180 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 HHIPQ96QV1 700 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 KXD1Q9BQD3 176 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 TMED9Q9BVK6 235 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 SMG9Q9H0W8 520 aaKnown RBP5.49□□□□□ -1.53
RFC1-202ENST00000381897 CNTD2Q9H8S5 307 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 PRDM9Q9NQV7 894 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 TAS2R7Q9NYW3 318 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 OR12D3Q9UGF7 316 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms