RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 UQCRC2P22695 453 aa7.82□□□□□ -1.16
PTPRR-203ENST00000378778 SLC6A4P31645 630 aa7.82□□□□□ -1.16
PTPRR-203ENST00000378778 RFX3P48380 749 aa7.82□□□□□ -1.16
PTPRR-203ENST00000378778 AFF1P51825 1210 aaKnown RBP7.82□□□□□ -1.16
PTPRR-203ENST00000378778 RHOAP61586 193 aa7.82□□□□□ -1.16
PTPRR-203ENST00000378778 ZNF763Q0D2J5 394 aa7.82□□□□□ -1.16
PTPRR-203ENST00000378778 TWF1Q12792 350 aa7.82□□□□□ -1.16
PTPRR-203ENST00000378778 GAB1Q13480 694 aa7.82□□□□□ -1.16
PTPRR-203ENST00000378778 TRAM1Q15629 374 aa7.82□□□□□ -1.16
PTPRR-203ENST00000378778 CDKN3Q16667 212 aa7.82□□□□□ -1.16
PTPRR-203ENST00000378778 MINDY4Q4G0A6 757 aa7.82□□□□□ -1.16
PTPRR-203ENST00000378778 BAIAP2L2Q6UXY1 529 aa7.82□□□□□ -1.16
PTPRR-203ENST00000378778 TPGS1Q6ZTW0 290 aa7.82□□□□□ -1.16
PTPRR-203ENST00000378778 OR7G3Q8NG95 312 aa7.82□□□□□ -1.16
PTPRR-203ENST00000378778 NFKBIDQ8NI38 313 aa7.82□□□□□ -1.16
PTPRR-203ENST00000378778 GTPBP3Q969Y2 492 aaKnown RBP7.82□□□□□ -1.16
PTPRR-203ENST00000378778 TRMT61AQ96FX7 289 aaKnown RBP7.82□□□□□ -1.16
PTPRR-203ENST00000378778 PDXPQ96GD0 296 aa7.82□□□□□ -1.16
PTPRR-203ENST00000378778 POLR2J3Q9H1A7 115 aaKnown RBP7.82□□□□□ -1.16
PTPRR-203ENST00000378778 SLC28A3Q9HAS3 691 aa7.82□□□□□ -1.16
PTPRR-203ENST00000378778 UBQLN2Q9UHD9 624 aa7.82□□□□□ -1.16
PTPRR-203ENST00000378778 SLC23A1Q9UHI7 598 aa7.82□□□□□ -1.16
PTPRR-203ENST00000378778 PPIL1Q9Y3C6 166 aa7.82□□□□□ -1.16
PTPRR-203ENST00000378778 PCDHB9Q9Y5E1 797 aa7.82□□□□□ -1.16
PTPRR-203ENST00000378778 PLXNB3Q9ULL4 1909 aa7.81□□□□□ -1.16
PTPRR-203ENST00000378778 FRMPD3Q5JV73 1810 aa7.81□□□□□ -1.16
PTPRR-203ENST00000378778 CBX4O00257 560 aa7.81□□□□□ -1.16
PTPRR-203ENST00000378778 ZNF197O14709 1029 aa7.81□□□□□ -1.16
PTPRR-203ENST00000378778 PRODHO43272 600 aa7.81□□□□□ -1.16
PTPRR-203ENST00000378778 CHP2O43745 196 aa7.81□□□□□ -1.16
PTPRR-203ENST00000378778 PEX14O75381 377 aa7.81□□□□□ -1.16
PTPRR-203ENST00000378778 SOD1P00441 154 aa7.81□□□□□ -1.16
PTPRR-203ENST00000378778 POMCP01189 267 aa7.81□□□□□ -1.16
PTPRR-203ENST00000378778 CSF2P04141 144 aa7.81□□□□□ -1.16
PTPRR-203ENST00000378778 IFNA16P05015 189 aa7.81□□□□□ -1.16
PTPRR-203ENST00000378778 RRASP10301 218 aa7.81□□□□□ -1.16
PTPRR-203ENST00000378778 RBMS1P29558 406 aaKnown RBP7.81□□□□□ -1.16
PTPRR-203ENST00000378778 GPR15P49685 360 aa7.81□□□□□ -1.16
PTPRR-203ENST00000378778 RAE1P78406 368 aaKnown RBP7.81□□□□□ -1.16
PTPRR-203ENST00000378778 ARF5P84085 180 aa7.81□□□□□ -1.16
PTPRR-203ENST00000378778 EFNB1P98172 346 aa7.81□□□□□ -1.16
PTPRR-203ENST00000378778 HOXC5Q00444 222 aa7.81□□□□□ -1.16
PTPRR-203ENST00000378778 DSC1Q08554 894 aa7.81□□□□□ -1.16
PTPRR-203ENST00000378778 PLA1AQ53H76 456 aa7.81□□□□□ -1.16
PTPRR-203ENST00000378778 HECTD3Q5T447 861 aa7.81□□□□□ -1.16
PTPRR-203ENST00000378778 RNF219Q5W0B1 726 aaPredicted RBP7.81□□□□□ -1.16
PTPRR-203ENST00000378778 C22orf42Q6IC83 251 aa7.81□□□□□ -1.16
PTPRR-203ENST00000378778 SLC36A4Q6YBV0 504 aa7.81□□□□□ -1.16
PTPRR-203ENST00000378778 FGD2Q7Z6J4 655 aa7.81□□□□□ -1.16
PTPRR-203ENST00000378778 GPAT4Q86UL3 456 aa7.81□□□□□ -1.16
PTPRR-203ENST00000378778 LRRC28Q86X40 367 aaPredicted RBP7.81□□□□□ -1.16
PTPRR-203ENST00000378778 ZNF557Q8N988 423 aaPredicted RBP7.81□□□□□ -1.16
PTPRR-203ENST00000378778 OR52J3Q8NH60 311 aa7.81□□□□□ -1.16
PTPRR-203ENST00000378778 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.81□□□□□ -1.16
PTPRR-203ENST00000378778 UPRTQ96BW1 309 aa7.81□□□□□ -1.16
PTPRR-203ENST00000378778 WDR34Q96EX3 536 aa7.81□□□□□ -1.16
PTPRR-203ENST00000378778 ZNF764Q96H86 408 aaPredicted RBP7.81□□□□□ -1.16
PTPRR-203ENST00000378778 ATF6BQ99941 703 aa7.81□□□□□ -1.16
PTPRR-203ENST00000378778 ARHGAP9Q9BRR9 750 aa7.81□□□□□ -1.16
PTPRR-203ENST00000378778 FUZQ9BT04 418 aa7.81□□□□□ -1.16
PTPRR-203ENST00000378778 BOCQ9BWV1 1114 aa7.81□□□□□ -1.16
PTPRR-203ENST00000378778 NLKQ9UBE8 527 aa7.81□□□□□ -1.16
PTPRR-203ENST00000378778 CLEC2DQ9UHP7 191 aa7.81□□□□□ -1.16
PTPRR-203ENST00000378778 SPIN1Q9Y657 262 aaPredicted RBP7.81□□□□□ -1.16
PTPRR-203ENST00000378778 KIAA1671Q9BY89 1806 aa7.81□□□□□ -1.16
PTPRR-203ENST00000378778 A0A1W2PRB8 838 aa7.81□□□□□ -1.16
PTPRR-203ENST00000378778 ANKRD61A6NGH8 418 aa7.81□□□□□ -1.16
PTPRR-203ENST00000378778 PRAMEF25A6NGN4 478 aa7.81□□□□□ -1.16
PTPRR-203ENST00000378778 ADM5C9JUS6 153 aa7.81□□□□□ -1.16
PTPRR-203ENST00000378778 YY2O15391 372 aa7.81□□□□□ -1.16
PTPRR-203ENST00000378778 AKR7A2O43488 359 aa7.81□□□□□ -1.16
PTPRR-203ENST00000378778 AKAP8O43823 692 aaKnown RBP7.81□□□□□ -1.16
PTPRR-203ENST00000378778 NBNO60934 754 aa7.81□□□□□ -1.16
PTPRR-203ENST00000378778 B3GALT4O96024 378 aa7.81□□□□□ -1.16
PTPRR-203ENST00000378778 ZNF865P0CJ78 1059 aaPredicted RBP7.81□□□□□ -1.16
PTPRR-203ENST00000378778 UGT2B7P16662 529 aa7.81□□□□□ -1.16
PTPRR-203ENST00000378778 BPIP17213 487 aa7.81□□□□□ -1.16
PTPRR-203ENST00000378778 ELAVL4P26378 380 aaKnown RBP7.81□□□□□ -1.16
PTPRR-203ENST00000378778 HOXD10P28358 340 aa7.81□□□□□ -1.16
PTPRR-203ENST00000378778 MTNR1BP49286 362 aa7.81□□□□□ -1.16
PTPRR-203ENST00000378778 SMSP52788 366 aa7.81□□□□□ -1.16
PTPRR-203ENST00000378778 PFN3P60673 137 aa7.81□□□□□ -1.16
PTPRR-203ENST00000378778 DSTNP60981 165 aa7.81□□□□□ -1.16
PTPRR-203ENST00000378778 IL18Q14116 193 aa7.81□□□□□ -1.16
PTPRR-203ENST00000378778 FAM110CQ1W6H9 321 aa7.81□□□□□ -1.16
PTPRR-203ENST00000378778 CRTC2Q53ET0 693 aaPredicted RBP7.81□□□□□ -1.16
PTPRR-203ENST00000378778 ARHGAP15Q53QZ3 475 aa7.81□□□□□ -1.16
PTPRR-203ENST00000378778 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.81□□□□□ -1.16
PTPRR-203ENST00000378778 ENTPD8Q5MY95 495 aa7.81□□□□□ -1.16
PTPRR-203ENST00000378778 ADGRF1Q5T601 910 aa7.81□□□□□ -1.16
PTPRR-203ENST00000378778 PAMR1Q6UXH9 720 aa7.81□□□□□ -1.16
PTPRR-203ENST00000378778 PDZD3Q86UT5 571 aa7.81□□□□□ -1.16
PTPRR-203ENST00000378778 SERINC5Q86VE9 423 aa7.81□□□□□ -1.16
PTPRR-203ENST00000378778 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.81□□□□□ -1.16
PTPRR-203ENST00000378778 GJD3Q8N144 294 aa7.81□□□□□ -1.16
PTPRR-203ENST00000378778 DCAF4L2Q8NA75 395 aa7.81□□□□□ -1.16
PTPRR-203ENST00000378778 OR52N1Q8NH53 320 aa7.81□□□□□ -1.16
PTPRR-203ENST00000378778 HUS1BQ8NHY5 278 aa7.81□□□□□ -1.16
PTPRR-203ENST00000378778 FGF11Q92914 225 aa7.81□□□□□ -1.16
PTPRR-203ENST00000378778 RFKQ969G6 155 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms