RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 DEF8Q6ZN54 512 aa18.23■□□□□ 0.51
PCDHA4-201ENST00000378125 TAGAPQ8N103 731 aa18.23■□□□□ 0.51
PCDHA4-201ENST00000378125 AQP11Q8NBQ7 271 aa18.23■□□□□ 0.51
PCDHA4-201ENST00000378125 MS4A6EQ96DS6 147 aa18.23■□□□□ 0.51
PCDHA4-201ENST00000378125 ALPK1Q96QP1 1244 aa18.23■□□□□ 0.51
PCDHA4-201ENST00000378125 OR51I1Q9H343 314 aa18.23■□□□□ 0.51
PCDHA4-201ENST00000378125 GPN2Q9H9Y4 310 aaPredicted RBP18.23■□□□□ 0.51
PCDHA4-201ENST00000378125 PCDHGA2Q9Y5H1 932 aa18.23■□□□□ 0.51
PCDHA4-201ENST00000378125 CCNB2O95067 398 aa18.22■□□□□ 0.51
PCDHA4-201ENST00000378125 ANXA8P13928 327 aa18.22■□□□□ 0.51
PCDHA4-201ENST00000378125 CERS1P27544 350 aa18.22■□□□□ 0.51
PCDHA4-201ENST00000378125 POU1F1P28069 291 aa18.22■□□□□ 0.51
PCDHA4-201ENST00000378125 SERPINB1P30740 379 aa18.22■□□□□ 0.51
PCDHA4-201ENST00000378125 GGT2P36268 569 aa18.22■□□□□ 0.51
PCDHA4-201ENST00000378125 DUSP2Q05923 314 aa18.22■□□□□ 0.51
PCDHA4-201ENST00000378125 GPR19Q15760 415 aa18.22■□□□□ 0.51
PCDHA4-201ENST00000378125 CTF1Q16619 201 aa18.22■□□□□ 0.51
PCDHA4-201ENST00000378125 TMEM184AQ6ZMB5 413 aa18.22■□□□□ 0.51
PCDHA4-201ENST00000378125 CCDC116Q8IYX3 515 aa18.22■□□□□ 0.51
PCDHA4-201ENST00000378125 OR1E3Q8WZA6 343 aa18.22■□□□□ 0.51
PCDHA4-201ENST00000378125 SIPA1Q96FS4 1042 aa18.22■□□□□ 0.51
PCDHA4-201ENST00000378125 AMDHD1Q96NU7 426 aa18.22■□□□□ 0.51
PCDHA4-201ENST00000378125 COL21A1Q96P44 957 aa18.22■□□□□ 0.51
PCDHA4-201ENST00000378125 BBS4Q96RK4 519 aa18.22■□□□□ 0.51
PCDHA4-201ENST00000378125 ZNF556Q9HAH1 456 aa18.22■□□□□ 0.51
PCDHA4-201ENST00000378125 ACOT13Q9NPJ3 140 aa18.22■□□□□ 0.51
PCDHA4-201ENST00000378125 ZCCHC3Q9NUD5 404 aaKnown RBP18.22■□□□□ 0.51
PCDHA4-201ENST00000378125 USP34Q70CQ2 3546 aa18.22■□□□□ 0.51
PCDHA4-201ENST00000378125 TRBV4-1A0A0J9YWV2 114 aa18.22■□□□□ 0.51
PCDHA4-201ENST00000378125 SEMA7AO75326 666 aa18.22■□□□□ 0.51
PCDHA4-201ENST00000378125 MFN2O95140 757 aa18.22■□□□□ 0.51
PCDHA4-201ENST00000378125 TEAD1P28347 426 aa18.22■□□□□ 0.51
PCDHA4-201ENST00000378125 FEN1P39748 380 aaKnown RBP18.22■□□□□ 0.51
PCDHA4-201ENST00000378125 ELOAQ14241 798 aaKnown RBP18.22■□□□□ 0.51
PCDHA4-201ENST00000378125 SLC9A5Q14940 896 aa18.22■□□□□ 0.51
PCDHA4-201ENST00000378125 LEXMQ3ZCV2 418 aa18.22■□□□□ 0.51
PCDHA4-201ENST00000378125 KLHL35Q6PF15 583 aa18.22■□□□□ 0.51
PCDHA4-201ENST00000378125 S1PR5Q9H228 398 aa18.22■□□□□ 0.51
PCDHA4-201ENST00000378125 PLGRKTQ9HBL7 147 aa18.22■□□□□ 0.51
PCDHA4-201ENST00000378125 A4GALTQ9NPC4 353 aa18.22■□□□□ 0.51
PCDHA4-201ENST00000378125 SLC35C2Q9NQQ7 365 aa18.22■□□□□ 0.51
PCDHA4-201ENST00000378125 POFUT2Q9Y2G5 429 aa18.22■□□□□ 0.51
PCDHA4-201ENST00000378125 A0A1W2PR48 441 aa18.21■□□□□ 0.51
PCDHA4-201ENST00000378125 KLHL33A6NCF5 533 aa18.21■□□□□ 0.51
PCDHA4-201ENST00000378125 TOR1BO14657 336 aa18.21■□□□□ 0.51
PCDHA4-201ENST00000378125 FRKP42685 505 aaPredicted RBP18.21■□□□□ 0.51
PCDHA4-201ENST00000378125 VBP1P61758 197 aa18.21■□□□□ 0.51
PCDHA4-201ENST00000378125 KIAA1324Q6UXG2 1013 aaKnown RBP18.21■□□□□ 0.51
PCDHA4-201ENST00000378125 ZNF605Q86T29 641 aa18.21■□□□□ 0.51
PCDHA4-201ENST00000378125 LACC1Q8IV20 430 aa18.21■□□□□ 0.51
PCDHA4-201ENST00000378125 ACOT4Q8N9L9 421 aa18.21■□□□□ 0.51
PCDHA4-201ENST00000378125 OR4D11Q8NGI4 311 aa18.21■□□□□ 0.51
PCDHA4-201ENST00000378125 SLC35G5Q96KT7 338 aa18.21■□□□□ 0.51
PCDHA4-201ENST00000378125 GABRG3Q99928 467 aa18.21■□□□□ 0.51
PCDHA4-201ENST00000378125 C1QTNF7Q9BXJ2 289 aa18.21■□□□□ 0.51
PCDHA4-201ENST00000378125 ARMC7Q9H6L4 198 aa18.21■□□□□ 0.51
PCDHA4-201ENST00000378125 NMNAT1Q9HAN9 279 aaPredicted RBP18.21■□□□□ 0.51
PCDHA4-201ENST00000378125 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.21■□□□□ 0.51
PCDHA4-201ENST00000378125 PCDHGB1Q9Y5G3 927 aa18.21■□□□□ 0.51
PCDHA4-201ENST00000378125 SCN3AQ9NY46 2000 aa18.21■□□□□ 0.51
PCDHA4-201ENST00000378125 J3QRK9 145 aa18.21■□□□□ 0.51
PCDHA4-201ENST00000378125 BTN3A3O00478 584 aa18.21■□□□□ 0.51
PCDHA4-201ENST00000378125 MAGEB3O15480 346 aa18.21■□□□□ 0.51
PCDHA4-201ENST00000378125 PRICKLE3O43900 615 aaPredicted RBP18.21■□□□□ 0.51
PCDHA4-201ENST00000378125 TPST2O60704 377 aa18.21■□□□□ 0.51
PCDHA4-201ENST00000378125 RHCEP18577 417 aa18.21■□□□□ 0.51
PCDHA4-201ENST00000378125 CTHP32929 405 aa18.21■□□□□ 0.51
PCDHA4-201ENST00000378125 ACSL1P33121 698 aa18.21■□□□□ 0.51
PCDHA4-201ENST00000378125 TGFBR1P36897 503 aa18.21■□□□□ 0.51
PCDHA4-201ENST00000378125 SNRPNP63162 240 aaKnown RBP18.21■□□□□ 0.51
PCDHA4-201ENST00000378125 TMED1Q13445 227 aa18.21■□□□□ 0.51
PCDHA4-201ENST00000378125 ANKRD13BQ86YJ7 626 aa18.21■□□□□ 0.51
PCDHA4-201ENST00000378125 NDNFQ8TB73 568 aa18.21■□□□□ 0.51
PCDHA4-201ENST00000378125 COPS4Q9BT78 406 aa18.21■□□□□ 0.51
PCDHA4-201ENST00000378125 PITHD1Q9GZP4 211 aaPredicted RBP18.21■□□□□ 0.51
PCDHA4-201ENST00000378125 MVB12BQ9H7P6 319 aa18.21■□□□□ 0.51
PCDHA4-201ENST00000378125 RMI1Q9H9A7 625 aa18.21■□□□□ 0.51
PCDHA4-201ENST00000378125 PRDM7Q9NQW5 492 aa18.21■□□□□ 0.51
PCDHA4-201ENST00000378125 ZNF226Q9NYT6 803 aa18.21■□□□□ 0.51
PCDHA4-201ENST00000378125 ADAM29Q9UKF5 820 aa18.21■□□□□ 0.51
PCDHA4-201ENST00000378125 HCN4Q9Y3Q4 1203 aa18.21■□□□□ 0.51
PCDHA4-201ENST00000378125 TRIOO75962 3097 aa18.21■□□□□ 0.51
PCDHA4-201ENST00000378125 A0A0J9YVX5 310 aa18.2■□□□□ 0.5
PCDHA4-201ENST00000378125 PRR19A6NJB7 356 aa18.2■□□□□ 0.5
PCDHA4-201ENST00000378125 E9PQ18 207 aa18.2■□□□□ 0.5
PCDHA4-201ENST00000378125 TBX19O60806 448 aa18.2■□□□□ 0.5
PCDHA4-201ENST00000378125 HIST1H1TP22492 207 aaPredicted RBP18.2■□□□□ 0.5
PCDHA4-201ENST00000378125 LIMS1P48059 325 aa18.2■□□□□ 0.5
PCDHA4-201ENST00000378125 ZIC1Q15915 447 aa18.2■□□□□ 0.5
PCDHA4-201ENST00000378125 ABHD17CQ6PCB6 329 aa18.2■□□□□ 0.5
PCDHA4-201ENST00000378125 COMTD1Q86VU5 262 aa18.2■□□□□ 0.5
PCDHA4-201ENST00000378125 LCN9Q8WX39 176 aa18.2■□□□□ 0.5
PCDHA4-201ENST00000378125 OR2M4Q96R27 311 aa18.2■□□□□ 0.5
PCDHA4-201ENST00000378125 TREX2Q9BQ50 279 aaPredicted RBP18.2■□□□□ 0.5
PCDHA4-201ENST00000378125 RAB11FIP5Q9BXF6 653 aa18.2■□□□□ 0.5
PCDHA4-201ENST00000378125 GPR83Q9NYM4 423 aa18.2■□□□□ 0.5
PCDHA4-201ENST00000378125 SEC14L3Q9UDX4 400 aa18.2■□□□□ 0.5
PCDHA4-201ENST00000378125 APOBEC3BQ9UH17 382 aaKnown RBP18.2■□□□□ 0.5
PCDHA4-201ENST00000378125 WBP11Q9Y2W2 641 aaKnown RBP18.2■□□□□ 0.5
PCDHA4-201ENST00000378125 MDC1Q14676 2089 aaKnown RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms