RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 NAV1Q8NEY1 1877 aa16.41■□□□□ 0.22
MCF2L-203ENST00000375604 NPIPB15A6NHN6 443 aaPredicted RBP16.41■□□□□ 0.22
MCF2L-203ENST00000375604 SMAD6O43541 496 aaKnown RBP16.41■□□□□ 0.22
MCF2L-203ENST00000375604 KCNJ13O60928 360 aa16.41■□□□□ 0.22
MCF2L-203ENST00000375604 ADAM15Q13444 863 aa16.41■□□□□ 0.22
MCF2L-203ENST00000375604 GXYLT1Q4G148 440 aa16.41■□□□□ 0.22
MCF2L-203ENST00000375604 ZNF852Q6ZMS4 543 aa16.41■□□□□ 0.22
MCF2L-203ENST00000375604 SLC6A7Q99884 636 aa16.41■□□□□ 0.22
MCF2L-203ENST00000375604 C1orf21Q9H246 121 aa16.41■□□□□ 0.22
MCF2L-203ENST00000375604 LTBP3Q9NS15 1303 aa16.41■□□□□ 0.22
MCF2L-203ENST00000375604 FPR1P21462 350 aa16.41■□□□□ 0.22
MCF2L-203ENST00000375604 MORN1Q5T089 497 aa16.41■□□□□ 0.22
MCF2L-203ENST00000375604 SYCE2Q6PIF2 218 aa16.41■□□□□ 0.22
MCF2L-203ENST00000375604 TREML1Q86YW5 311 aa16.41■□□□□ 0.22
MCF2L-203ENST00000375604 SYNPOQ8N3V7 929 aa16.41■□□□□ 0.22
MCF2L-203ENST00000375604 RNF6Q9Y252 685 aa16.41■□□□□ 0.22
MCF2L-203ENST00000375604 PIK3CBP42338 1070 aa16.4■□□□□ 0.22
MCF2L-203ENST00000375604 SPINT3P49223 89 aa16.4■□□□□ 0.22
MCF2L-203ENST00000375604 PTPRRQ15256 657 aa16.4■□□□□ 0.22
MCF2L-203ENST00000375604 ERMP1Q7Z2K6 904 aa16.4■□□□□ 0.22
MCF2L-203ENST00000375604 INO80EQ8NBZ0 244 aaPredicted RBP16.4■□□□□ 0.22
MCF2L-203ENST00000375604 ZNF382Q96SR6 550 aa16.4■□□□□ 0.22
MCF2L-203ENST00000375604 RGPD5Q99666 1765 aa16.4■□□□□ 0.22
MCF2L-203ENST00000375604 KANTRA0A1W2PQU2 76 aa16.4■□□□□ 0.22
MCF2L-203ENST00000375604 RFXAPO00287 272 aa16.4■□□□□ 0.22
MCF2L-203ENST00000375604 FAM163BP0C2L3 166 aa16.4■□□□□ 0.22
MCF2L-203ENST00000375604 C6orf120Q7Z4R8 191 aa16.4■□□□□ 0.22
MCF2L-203ENST00000375604 TMEM17Q86X19 198 aa16.4■□□□□ 0.22
MCF2L-203ENST00000375604 IQCF1Q8N6M8 205 aa16.4■□□□□ 0.22
MCF2L-203ENST00000375604 TESCQ96BS2 214 aa16.4■□□□□ 0.22
MCF2L-203ENST00000375604 MUS81Q96NY9 551 aa16.4■□□□□ 0.22
MCF2L-203ENST00000375604 RBP7Q96R05 134 aa16.4■□□□□ 0.22
MCF2L-203ENST00000375604 SRCP12931 536 aa16.4■□□□□ 0.22
MCF2L-203ENST00000375604 CD68P34810 354 aaPredicted RBP16.4■□□□□ 0.22
MCF2L-203ENST00000375604 ABHD18Q0P651 414 aa16.4■□□□□ 0.22
MCF2L-203ENST00000375604 EMC10Q5UCC4 262 aa16.4■□□□□ 0.22
MCF2L-203ENST00000375604 CES4AQ5XG92 561 aa16.4■□□□□ 0.22
MCF2L-203ENST00000375604 MAMDC4Q6UXC1 1216 aa16.4■□□□□ 0.22
MCF2L-203ENST00000375604 CCDC36Q8IYA8 594 aa16.4■□□□□ 0.22
MCF2L-203ENST00000375604 ZDHHC14Q8IZN3 488 aa16.4■□□□□ 0.22
MCF2L-203ENST00000375604 ZNF689Q96CS4 500 aaPredicted RBP16.4■□□□□ 0.22
MCF2L-203ENST00000375604 CASD1Q96PB1 797 aa16.4■□□□□ 0.22
MCF2L-203ENST00000375604 MEMO1Q9Y316 297 aa16.4■□□□□ 0.22
MCF2L-203ENST00000375604 HCN4Q9Y3Q4 1203 aa16.4■□□□□ 0.22
MCF2L-203ENST00000375604 ST14Q9Y5Y6 855 aa16.4■□□□□ 0.22
MCF2L-203ENST00000375604 APOC1P02654 83 aa16.4■□□□□ 0.22
MCF2L-203ENST00000375604 JUPP14923 745 aa16.4■□□□□ 0.22
MCF2L-203ENST00000375604 RPL26P61254 145 aaKnown RBP16.4■□□□□ 0.22
MCF2L-203ENST00000375604 C6orf132Q5T0Z8 1188 aa16.4■□□□□ 0.22
MCF2L-203ENST00000375604 UBE2Q1Q7Z7E8 422 aa16.4■□□□□ 0.22
MCF2L-203ENST00000375604 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.4■□□□□ 0.22
MCF2L-203ENST00000375604 RNF175Q8N4F7 328 aa16.4■□□□□ 0.22
MCF2L-203ENST00000375604 ZSCAN4Q8NAM6 433 aaPredicted RBP16.4■□□□□ 0.22
MCF2L-203ENST00000375604 G6PC3Q9BUM1 346 aa16.4■□□□□ 0.22
MCF2L-203ENST00000375604 SDHDO14521 159 aa16.4■□□□□ 0.22
MCF2L-203ENST00000375604 COL2A1P02458 1487 aaPredicted RBP16.4■□□□□ 0.22
MCF2L-203ENST00000375604 CYP17A1P05093 508 aa16.4■□□□□ 0.22
MCF2L-203ENST00000375604 ZNF252P-AS1Q0IIN9 211 aa16.4■□□□□ 0.22
MCF2L-203ENST00000375604 ELAVL3Q14576 367 aaKnown RBP16.4■□□□□ 0.22
MCF2L-203ENST00000375604 TMEM44Q2T9K0 475 aa16.4■□□□□ 0.22
MCF2L-203ENST00000375604 FIGLAQ6QHK4 219 aa16.4■□□□□ 0.22
MCF2L-203ENST00000375604 OR2L2Q8NH16 312 aa16.4■□□□□ 0.22
MCF2L-203ENST00000375604 THAP4Q8WY91 577 aa16.4■□□□□ 0.22
MCF2L-203ENST00000375604 ASB6Q9NWX5 421 aa16.4■□□□□ 0.22
MCF2L-203ENST00000375604 PCDHGB1Q9Y5G3 927 aa16.4■□□□□ 0.22
MCF2L-203ENST00000375604 C10orf71Q711Q0 1435 aa16.39■□□□□ 0.21
MCF2L-203ENST00000375604 HNRNPA1P09651 372 aaKnown RBP eCLIP16.39■□□□□ 0.21
MCF2L-203ENST00000375604 PRKCAP17252 672 aa16.39■□□□□ 0.21
MCF2L-203ENST00000375604 RAB28P51157 221 aa16.39■□□□□ 0.21
MCF2L-203ENST00000375604 ERV3-1Q14264 604 aa16.39■□□□□ 0.21
MCF2L-203ENST00000375604 Q6ZSR6 202 aa16.39■□□□□ 0.21
MCF2L-203ENST00000375604 OR56A3Q8NH54 315 aa16.39■□□□□ 0.21
MCF2L-203ENST00000375604 FUZQ9BT04 418 aa16.39■□□□□ 0.21
MCF2L-203ENST00000375604 NUFIP1Q9UHK0 495 aaKnown RBP16.39■□□□□ 0.21
MCF2L-203ENST00000375604 NUP188Q5SRE5 1749 aa16.39■□□□□ 0.21
MCF2L-203ENST00000375604 TEX46H3BTG2 121 aa16.39■□□□□ 0.21
MCF2L-203ENST00000375604 SCAMP2O15127 329 aaKnown RBP16.39■□□□□ 0.21
MCF2L-203ENST00000375604 MPC1LP0DKB6 136 aa16.39■□□□□ 0.21
MCF2L-203ENST00000375604 P2RY2P41231 377 aa16.39■□□□□ 0.21
MCF2L-203ENST00000375604 VTCN1Q7Z7D3 282 aa16.39■□□□□ 0.21
MCF2L-203ENST00000375604 FAM86B1Q8N7N1 296 aa16.39■□□□□ 0.21
MCF2L-203ENST00000375604 ZNF675Q8TD23 568 aa16.39■□□□□ 0.21
MCF2L-203ENST00000375604 OR5P2Q8WZ92 322 aa16.39■□□□□ 0.21
MCF2L-203ENST00000375604 FOXN4Q96NZ1 517 aa16.39■□□□□ 0.21
MCF2L-203ENST00000375604 hCG_1807616A0A1W2PRN6 198 aa16.39■□□□□ 0.21
MCF2L-203ENST00000375604 SFTPDP35247 375 aa16.39■□□□□ 0.21
MCF2L-203ENST00000375604 FIP1L1Q6UN15 594 aaKnown RBP16.39■□□□□ 0.21
MCF2L-203ENST00000375604 KLHDC8AQ8IYD2 350 aa16.39■□□□□ 0.21
MCF2L-203ENST00000375604 SLC37A3Q8NCC5 494 aa16.39■□□□□ 0.21
MCF2L-203ENST00000375604 DENND6BQ8NEG7 585 aa16.39■□□□□ 0.21
MCF2L-203ENST00000375604 OR52E2Q8NGJ4 325 aa16.39■□□□□ 0.21
MCF2L-203ENST00000375604 SLC45A3Q96JT2 553 aa16.39■□□□□ 0.21
MCF2L-203ENST00000375604 AASSQ9UDR5 926 aa16.39■□□□□ 0.21
MCF2L-203ENST00000375604 MYH8P13535 1937 aa16.39■□□□□ 0.21
MCF2L-203ENST00000375604 A6NLC8 198 aa16.39■□□□□ 0.21
MCF2L-203ENST00000375604 EMC8O43402 210 aa16.39■□□□□ 0.21
MCF2L-203ENST00000375604 RPS15AP62244 130 aaKnown RBP16.39■□□□□ 0.21
MCF2L-203ENST00000375604 SH3BP2P78314 561 aa16.39■□□□□ 0.21
MCF2L-203ENST00000375604 RBM39Q14498 530 aaKnown RBP16.39■□□□□ 0.21
MCF2L-203ENST00000375604 C17orf99Q6UX52 265 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms