RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 WDR92Q96MX6 357 aa13.74□□□□□ -0.21
TRAF1-201ENST00000373887 SRPRAP08240 638 aaKnown RBP13.73□□□□□ -0.21
TRAF1-201ENST00000373887 LEPRP48357 1165 aaKnown RBP13.73□□□□□ -0.21
TRAF1-201ENST00000373887 GSK3BP49841 420 aa13.73□□□□□ -0.21
TRAF1-201ENST00000373887 NFE2L1Q14494 772 aa13.73□□□□□ -0.21
TRAF1-201ENST00000373887 TAS1R1Q7RTX1 841 aa13.73□□□□□ -0.21
TRAF1-201ENST00000373887 NLGN4XQ8N0W4 816 aa13.73□□□□□ -0.21
TRAF1-201ENST00000373887 RAB8BQ92930 207 aa13.73□□□□□ -0.21
TRAF1-201ENST00000373887 ZIC5Q96T25 663 aa13.73□□□□□ -0.21
TRAF1-201ENST00000373887 C7orf50Q9BRJ6 194 aaKnown RBP13.73□□□□□ -0.21
TRAF1-201ENST00000373887 HSD3B7Q9H2F3 369 aa13.73□□□□□ -0.21
TRAF1-201ENST00000373887 ZNF451Q9Y4E5 1061 aa13.73□□□□□ -0.21
TRAF1-201ENST00000373887 PCDHGA8Q9Y5G5 932 aa13.73□□□□□ -0.21
TRAF1-201ENST00000373887 CDH10Q9Y6N8 788 aa13.73□□□□□ -0.21
TRAF1-201ENST00000373887 TBX10O75333 385 aa13.73□□□□□ -0.21
TRAF1-201ENST00000373887 PGGT1BP53609 377 aa13.73□□□□□ -0.21
TRAF1-201ENST00000373887 PIGFQ07326 219 aa13.73□□□□□ -0.21
TRAF1-201ENST00000373887 ZNF616Q08AN1 781 aa13.73□□□□□ -0.21
TRAF1-201ENST00000373887 TMIGD1Q6UXZ0 262 aa13.73□□□□□ -0.21
TRAF1-201ENST00000373887 DPY19L4Q7Z388 723 aa13.73□□□□□ -0.21
TRAF1-201ENST00000373887 TRMT10AQ8TBZ6 339 aaKnown RBP13.73□□□□□ -0.21
TRAF1-201ENST00000373887 ELP5Q8TE02 316 aa13.73□□□□□ -0.21
TRAF1-201ENST00000373887 C12orf71A8MTZ7 269 aa13.73□□□□□ -0.21
TRAF1-201ENST00000373887 IFNGR1P15260 489 aa13.73□□□□□ -0.21
TRAF1-201ENST00000373887 ELOAQ14241 798 aaKnown RBP13.73□□□□□ -0.21
TRAF1-201ENST00000373887 KCNJ11Q14654 390 aa13.73□□□□□ -0.21
TRAF1-201ENST00000373887 NIPAL1Q6NVV3 410 aa13.73□□□□□ -0.21
TRAF1-201ENST00000373887 SAV1Q9H4B6 383 aaPredicted RBP13.73□□□□□ -0.21
TRAF1-201ENST00000373887 TBCCD1Q9NVR7 557 aa13.73□□□□□ -0.21
TRAF1-201ENST00000373887 RGPD5Q99666 1765 aa13.73□□□□□ -0.21
TRAF1-201ENST00000373887 ZNF850A8MQ14 1090 aa13.73□□□□□ -0.21
TRAF1-201ENST00000373887 NAA10P41227 235 aaPredicted RBP13.73□□□□□ -0.21
TRAF1-201ENST00000373887 WDR5P61964 334 aaKnown RBP13.73□□□□□ -0.21
TRAF1-201ENST00000373887 FAPQ12884 760 aa13.73□□□□□ -0.21
TRAF1-201ENST00000373887 CST6Q15828 149 aa13.73□□□□□ -0.21
TRAF1-201ENST00000373887 TMEM225Q6GV28 225 aa13.73□□□□□ -0.21
TRAF1-201ENST00000373887 GALNT10Q86SR1 603 aa13.73□□□□□ -0.21
TRAF1-201ENST00000373887 DCUN1D3Q8IWE4 304 aa13.73□□□□□ -0.21
TRAF1-201ENST00000373887 ELMOD2Q8IZ81 293 aa13.73□□□□□ -0.21
TRAF1-201ENST00000373887 OR13C3Q8NGS6 347 aa13.73□□□□□ -0.21
TRAF1-201ENST00000373887 KCNN1Q92952 543 aa13.73□□□□□ -0.21
TRAF1-201ENST00000373887 HINT2Q9BX68 163 aa13.73□□□□□ -0.21
TRAF1-201ENST00000373887 NLE1Q9NVX2 485 aaPredicted RBP13.73□□□□□ -0.21
TRAF1-201ENST00000373887 GIMAP2Q9UG22 337 aa13.73□□□□□ -0.21
TRAF1-201ENST00000373887 C2orf74A8MZ97 194 aa13.73□□□□□ -0.21
TRAF1-201ENST00000373887 H2BFMP0C1H6 154 aa13.73□□□□□ -0.21
TRAF1-201ENST00000373887 HOXA11P31270 313 aaPredicted RBP13.73□□□□□ -0.21
TRAF1-201ENST00000373887 CYBRD1Q53TN4 286 aa13.73□□□□□ -0.21
TRAF1-201ENST00000373887 DRICH1Q6PGQ1 229 aaPredicted RBP13.73□□□□□ -0.21
TRAF1-201ENST00000373887 DCDC5Q6ZRR9 648 aa13.73□□□□□ -0.21
TRAF1-201ENST00000373887 PIGWQ7Z7B1 504 aa13.73□□□□□ -0.21
TRAF1-201ENST00000373887 ZDHHC12Q96GR4 267 aa13.73□□□□□ -0.21
TRAF1-201ENST00000373887 A0A0U1RQS6 177 aa13.72□□□□□ -0.21
TRAF1-201ENST00000373887 OR6C6A6NF89 314 aa13.72□□□□□ -0.21
TRAF1-201ENST00000373887 RFXAPO00287 272 aa13.72□□□□□ -0.21
TRAF1-201ENST00000373887 SLC19A2O60779 497 aa13.72□□□□□ -0.21
TRAF1-201ENST00000373887 CPNE6O95741 557 aa13.72□□□□□ -0.21
TRAF1-201ENST00000373887 FOSL1P15407 271 aa13.72□□□□□ -0.21
TRAF1-201ENST00000373887 F8A1P23610 371 aa13.72□□□□□ -0.21
TRAF1-201ENST00000373887 TUBA1BP68363 451 aa13.72□□□□□ -0.21
TRAF1-201ENST00000373887 PMS2P3Q13401 168 aa13.72□□□□□ -0.21
TRAF1-201ENST00000373887 HSD17B12Q53GQ0 312 aa13.72□□□□□ -0.21
TRAF1-201ENST00000373887 LIPKQ5VXJ0 399 aa13.72□□□□□ -0.21
TRAF1-201ENST00000373887 CFAP77Q6ZQR2 320 aa13.72□□□□□ -0.21
TRAF1-201ENST00000373887 TUBA1AQ71U36 451 aa13.72□□□□□ -0.21
TRAF1-201ENST00000373887 CENPSQ8N2Z9 138 aa13.72□□□□□ -0.21
TRAF1-201ENST00000373887 OR4C15Q8NGM1 316 aa13.72□□□□□ -0.21
TRAF1-201ENST00000373887 ZIM2Q9NZV7 527 aa13.72□□□□□ -0.21
TRAF1-201ENST00000373887 NPIPA2E9PIF3 369 aa13.72□□□□□ -0.21
TRAF1-201ENST00000373887 INMT-MINDY4F8WBC2 141 aa13.72□□□□□ -0.21
TRAF1-201ENST00000373887 NPIPA3F8WFD2 350 aa13.72□□□□□ -0.21
TRAF1-201ENST00000373887 DLGAP1O14490 977 aa13.72□□□□□ -0.21
TRAF1-201ENST00000373887 SLC16A8O95907 504 aa13.72□□□□□ -0.21
TRAF1-201ENST00000373887 AMY2BP19961 511 aa13.72□□□□□ -0.21
TRAF1-201ENST00000373887 HADHBP55084 474 aaKnown RBP13.72□□□□□ -0.21
TRAF1-201ENST00000373887 TMEM69Q5SWH9 247 aa13.72□□□□□ -0.21
TRAF1-201ENST00000373887 CILP2Q8IUL8 1156 aa13.72□□□□□ -0.21
TRAF1-201ENST00000373887 OSTF1Q92882 214 aa13.72□□□□□ -0.21
TRAF1-201ENST00000373887 CREB3L1Q96BA8 519 aa13.72□□□□□ -0.21
TRAF1-201ENST00000373887 FAM83CQ9BQN1 747 aa13.72□□□□□ -0.21
TRAF1-201ENST00000373887 SYT4Q9H2B2 425 aa13.72□□□□□ -0.21
TRAF1-201ENST00000373887 MGAT4CQ9UBM8 478 aa13.72□□□□□ -0.21
TRAF1-201ENST00000373887 ZFR2Q9UPR6 939 aaKnown RBP13.72□□□□□ -0.21
TRAF1-201ENST00000373887 ERVK-19Q9WJR5 959 aa13.72□□□□□ -0.21
TRAF1-201ENST00000373887 C4BP0C0L5 1744 aa13.72□□□□□ -0.21
TRAF1-201ENST00000373887 KIF13AQ9H1H9 1805 aa13.72□□□□□ -0.21
TRAF1-201ENST00000373887 A0A0U1RQK1 487 aa13.72□□□□□ -0.21
TRAF1-201ENST00000373887 CD8B2A6NJW9 211 aa13.72□□□□□ -0.21
TRAF1-201ENST00000373887 SLITRK5O94991 958 aa13.72□□□□□ -0.21
TRAF1-201ENST00000373887 CD8BP10966 210 aa13.72□□□□□ -0.21
TRAF1-201ENST00000373887 RABL3Q5HYI8 236 aa13.72□□□□□ -0.21
TRAF1-201ENST00000373887 CCDC28AQ8IWP9 274 aa13.72□□□□□ -0.21
TRAF1-201ENST00000373887 OR56A1Q8NGH5 318 aa13.72□□□□□ -0.21
TRAF1-201ENST00000373887 PRR11Q96HE9 360 aaPredicted RBP13.72□□□□□ -0.21
TRAF1-201ENST00000373887 POT1Q9NUX5 634 aa13.72□□□□□ -0.21
TRAF1-201ENST00000373887 EPHA6Q9UF33 1036 aa13.72□□□□□ -0.21
TRAF1-201ENST00000373887 SYNGR4O95473 234 aa13.72□□□□□ -0.21
TRAF1-201ENST00000373887 GKN3PP0CG01 181 aa13.72□□□□□ -0.21
TRAF1-201ENST00000373887 RAB4AP20338 218 aa13.72□□□□□ -0.21
TRAF1-201ENST00000373887 NR4A2P43354 598 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms