RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 VPS50Q96JG6 964 aa9.85□□□□□ -0.83
COL5A1-202ENST00000371820 RNF145Q96MT1 663 aa9.85□□□□□ -0.83
COL5A1-202ENST00000371820 DPY30Q9C005 99 aa9.85□□□□□ -0.83
COL5A1-202ENST00000371820 TWSG1Q9GZX9 223 aa9.85□□□□□ -0.83
COL5A1-202ENST00000371820 ACTL8Q9H568 366 aa9.85□□□□□ -0.83
COL5A1-202ENST00000371820 IL1RL2Q9HB29 575 aa9.85□□□□□ -0.83
COL5A1-202ENST00000371820 TNFRSF12AQ9NP84 129 aa9.85□□□□□ -0.83
COL5A1-202ENST00000371820 SPATA7Q9P0W8 599 aa9.85□□□□□ -0.83
COL5A1-202ENST00000371820 IFT80Q9P2H3 777 aaPredicted RBP9.85□□□□□ -0.83
COL5A1-202ENST00000371820 EGFL7Q9UHF1 273 aa9.85□□□□□ -0.83
COL5A1-202ENST00000371820 C3orf18Q9UK00 162 aa9.85□□□□□ -0.83
COL5A1-202ENST00000371820 PLAGL1Q9UM63 463 aa9.85□□□□□ -0.83
COL5A1-202ENST00000371820 OAZ3Q9UMX2 235 aa9.85□□□□□ -0.83
COL5A1-202ENST00000371820 PLCL2Q9UPR0 1127 aa9.85□□□□□ -0.83
COL5A1-202ENST00000371820 FARSAQ9Y285 508 aaKnown RBP9.85□□□□□ -0.83
COL5A1-202ENST00000371820 MAN2B2Q9Y2E5 1009 aa9.85□□□□□ -0.83
COL5A1-202ENST00000371820 TMED5Q9Y3A6 229 aa9.85□□□□□ -0.83
COL5A1-202ENST00000371820 MRPS18BQ9Y676 258 aaKnown RBP9.85□□□□□ -0.83
COL5A1-202ENST00000371820 DOPEY2Q9Y3R5 2298 aa9.85□□□□□ -0.83
COL5A1-202ENST00000371820 NBASA2RRP1 2371 aa9.84□□□□□ -0.83
COL5A1-202ENST00000371820 SH3PXD2BA1X283 911 aa9.84□□□□□ -0.83
COL5A1-202ENST00000371820 CDC14CA4D256 554 aa9.84□□□□□ -0.83
COL5A1-202ENST00000371820 TRIM64BA6NI03 449 aa9.84□□□□□ -0.83
COL5A1-202ENST00000371820 G3V2T6 193 aa9.84□□□□□ -0.83
COL5A1-202ENST00000371820 MKRN2OSH3BPM6 223 aa9.84□□□□□ -0.83
COL5A1-202ENST00000371820 K7EPI3 171 aa9.84□□□□□ -0.83
COL5A1-202ENST00000371820 CDC7O00311 574 aa9.84□□□□□ -0.83
COL5A1-202ENST00000371820 GNGT2O14610 69 aa9.84□□□□□ -0.83
COL5A1-202ENST00000371820 PRMT3O60678 531 aa9.84□□□□□ -0.83
COL5A1-202ENST00000371820 UGT2B11O75310 529 aa9.84□□□□□ -0.83
COL5A1-202ENST00000371820 NIPSNAP2O75323 286 aa9.84□□□□□ -0.83
COL5A1-202ENST00000371820 ULK1O75385 1050 aa9.84□□□□□ -0.83
COL5A1-202ENST00000371820 OR4F21O95013 312 aa9.84□□□□□ -0.83
COL5A1-202ENST00000371820 C1orf105O95561 183 aa9.84□□□□□ -0.83
COL5A1-202ENST00000371820 CATP04040 527 aaKnown RBP9.84□□□□□ -0.83
COL5A1-202ENST00000371820 THRBP10828 461 aa9.84□□□□□ -0.83
COL5A1-202ENST00000371820 CD1EP15812 388 aa9.84□□□□□ -0.83
COL5A1-202ENST00000371820 TSPAN8P19075 237 aa9.84□□□□□ -0.83
COL5A1-202ENST00000371820 GGT1P19440 569 aa9.84□□□□□ -0.83
COL5A1-202ENST00000371820 VARSP26640 1264 aaKnown RBP9.84□□□□□ -0.83
COL5A1-202ENST00000371820 PGGT1BP53609 377 aa9.84□□□□□ -0.83
COL5A1-202ENST00000371820 ARSFP54793 590 aa9.84□□□□□ -0.83
COL5A1-202ENST00000371820 TPD52P55327 224 aaPredicted RBP9.84□□□□□ -0.83
COL5A1-202ENST00000371820 UFM1P61960 85 aa9.84□□□□□ -0.83
COL5A1-202ENST00000371820 FOXK1P85037 733 aa9.84□□□□□ -0.83
COL5A1-202ENST00000371820 NR6A1Q15406 480 aa9.84□□□□□ -0.83
COL5A1-202ENST00000371820 SF1Q15637 639 aaKnown RBP9.84□□□□□ -0.83
COL5A1-202ENST00000371820 UGT8Q16880 541 aa9.84□□□□□ -0.83
COL5A1-202ENST00000371820 IMPG1Q17R60 797 aa9.84□□□□□ -0.83
COL5A1-202ENST00000371820 DPY19L1Q2PZI1 675 aa9.84□□□□□ -0.83
COL5A1-202ENST00000371820 AP5B1Q2VPB7 878 aa9.84□□□□□ -0.83
COL5A1-202ENST00000371820 CTSL3PQ5NE16 218 aa9.84□□□□□ -0.83
COL5A1-202ENST00000371820 ATP1A1-AS1Q5TC04 95 aa9.84□□□□□ -0.83
COL5A1-202ENST00000371820 ZNF773Q6PK81 442 aa9.84□□□□□ -0.83
COL5A1-202ENST00000371820 CYP20A1Q6UW02 462 aa9.84□□□□□ -0.83
COL5A1-202ENST00000371820 ZNF517Q6ZMY9 492 aaPredicted RBP9.84□□□□□ -0.83
COL5A1-202ENST00000371820 Q6ZSR9 355 aa9.84□□□□□ -0.83
COL5A1-202ENST00000371820 SYTL1Q8IYJ3 562 aa9.84□□□□□ -0.83
COL5A1-202ENST00000371820 CLEC4FQ8N1N0 589 aa9.84□□□□□ -0.83
COL5A1-202ENST00000371820 OR5K1Q8NHB7 308 aa9.84□□□□□ -0.83
COL5A1-202ENST00000371820 CD200R1Q8TD46 325 aa9.84□□□□□ -0.83
COL5A1-202ENST00000371820 RAB2BQ8WUD1 216 aa9.84□□□□□ -0.83
COL5A1-202ENST00000371820 RNF31Q96EP0 1072 aa9.84□□□□□ -0.83
COL5A1-202ENST00000371820 SPATA9Q9BWV2 254 aa9.84□□□□□ -0.83
COL5A1-202ENST00000371820 NPLQ9BXD5 320 aaPredicted RBP9.84□□□□□ -0.83
COL5A1-202ENST00000371820 NLNQ9BYT8 704 aa9.84□□□□□ -0.83
COL5A1-202ENST00000371820 CD244Q9BZW8 370 aa9.84□□□□□ -0.83
COL5A1-202ENST00000371820 KLHL25Q9H0H3 589 aa9.84□□□□□ -0.83
COL5A1-202ENST00000371820 CHST8Q9H2A9 424 aa9.84□□□□□ -0.83
COL5A1-202ENST00000371820 ZNF71Q9NQZ8 489 aaPredicted RBP9.84□□□□□ -0.83
COL5A1-202ENST00000371820 SPHK1Q9NYA1 384 aa9.84□□□□□ -0.83
COL5A1-202ENST00000371820 OPTCQ9UBM4 332 aa9.84□□□□□ -0.83
COL5A1-202ENST00000371820 SNX7Q9UNH6 387 aa9.84□□□□□ -0.83
COL5A1-202ENST00000371820 TIMM22Q9Y584 194 aa9.84□□□□□ -0.83
COL5A1-202ENST00000371820 SNX5Q9Y5X3 404 aa9.84□□□□□ -0.83
COL5A1-202ENST00000371820 COL12A1Q99715 3063 aa9.84□□□□□ -0.83
COL5A1-202ENST00000371820 ELOVL7A1L3X0 281 aa9.83□□□□□ -0.84
COL5A1-202ENST00000371820 NPEPPSL1A6NEC2 478 aa9.83□□□□□ -0.84
COL5A1-202ENST00000371820 EVPLLA8MZ36 301 aa9.83□□□□□ -0.84
COL5A1-202ENST00000371820 NPIPB8E9PQR5 432 aa9.83□□□□□ -0.84
COL5A1-202ENST00000371820 SLC16A5O15375 505 aa9.83□□□□□ -0.84
COL5A1-202ENST00000371820 ZSCAN9O15535 394 aaPredicted RBP9.83□□□□□ -0.84
COL5A1-202ENST00000371820 ZNF749O43361 778 aa9.83□□□□□ -0.84
COL5A1-202ENST00000371820 ABCB7O75027 752 aa9.83□□□□□ -0.84
COL5A1-202ENST00000371820 TSPAN12O95859 305 aa9.83□□□□□ -0.84
COL5A1-202ENST00000371820 CAPN1P07384 714 aa9.83□□□□□ -0.84
COL5A1-202ENST00000371820 ANXA5P08758 320 aa9.83□□□□□ -0.84
COL5A1-202ENST00000371820 HIST1H2AGP0C0S8 130 aaPredicted RBP9.83□□□□□ -0.84
COL5A1-202ENST00000371820 EPB42P16452 691 aa9.83□□□□□ -0.84
COL5A1-202ENST00000371820 CCNA2P20248 432 aa9.83□□□□□ -0.84
COL5A1-202ENST00000371820 HIST1H2ADP20671 130 aa9.83□□□□□ -0.84
COL5A1-202ENST00000371820 GSTM2P28161 218 aa9.83□□□□□ -0.84
COL5A1-202ENST00000371820 PEBP1P30086 187 aaKnown RBP9.83□□□□□ -0.84
COL5A1-202ENST00000371820 RORAP35398 523 aa9.83□□□□□ -0.84
COL5A1-202ENST00000371820 HSD17B2P37059 387 aa9.83□□□□□ -0.84
COL5A1-202ENST00000371820 ARL1P40616 181 aaPredicted RBP9.83□□□□□ -0.84
COL5A1-202ENST00000371820 HNMTP50135 292 aa9.83□□□□□ -0.84
COL5A1-202ENST00000371820 CLCN7P51798 805 aa9.83□□□□□ -0.84
COL5A1-202ENST00000371820 DIO3P55073 304 aa9.83□□□□□ -0.84
COL5A1-202ENST00000371820 FOXA1P55317 472 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms