RNA–Protein interactions for RNA: ENST00000370397.7

CHUK-201, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHUK, Length 3,625 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-201ENST00000370397 WDR48Q8TAF3 677 aa16.66■□□□□ 0.26
CHUK-201ENST00000370397 NEIL2Q969S2 332 aa16.66■□□□□ 0.26
CHUK-201ENST00000370397 WDR34Q96EX3 536 aa16.66■□□□□ 0.26
CHUK-201ENST00000370397 MAP6Q96JE9 813 aa16.66■□□□□ 0.26
CHUK-201ENST00000370397 GPA33Q99795 319 aa16.66■□□□□ 0.26
CHUK-201ENST00000370397 ZNF649Q9BS31 505 aa16.66■□□□□ 0.26
CHUK-201ENST00000370397 POU3F3P20264 500 aaPredicted RBP16.66■□□□□ 0.26
CHUK-201ENST00000370397 FGF9P31371 208 aaPredicted RBP16.66■□□□□ 0.26
CHUK-201ENST00000370397 CD79BP40259 229 aa16.66■□□□□ 0.26
CHUK-201ENST00000370397 SPINT3P49223 89 aa16.66■□□□□ 0.26
CHUK-201ENST00000370397 FZD5Q13467 585 aa16.66■□□□□ 0.26
CHUK-201ENST00000370397 KCNA10Q16322 511 aa16.66■□□□□ 0.26
CHUK-201ENST00000370397 ANKK1Q8NFD2 765 aa16.66■□□□□ 0.26
CHUK-201ENST00000370397 UBASH3BQ8TF42 649 aa16.66■□□□□ 0.26
CHUK-201ENST00000370397 MARVELD3Q96A59 401 aa16.66■□□□□ 0.26
CHUK-201ENST00000370397 TMCC3Q9ULS5 477 aa16.66■□□□□ 0.26
CHUK-201ENST00000370397 HCN1O60741 890 aa16.66■□□□□ 0.26
CHUK-201ENST00000370397 IFNW1P05000 195 aa16.66■□□□□ 0.26
CHUK-201ENST00000370397 MAP2K3P46734 347 aa16.66■□□□□ 0.26
CHUK-201ENST00000370397 CAV3P56539 151 aa16.66■□□□□ 0.26
CHUK-201ENST00000370397 LSM11P83369 360 aaKnown RBP eCLIP16.66■□□□□ 0.26
CHUK-201ENST00000370397 RUNX1T1Q06455 604 aa16.66■□□□□ 0.26
CHUK-201ENST00000370397 DDI2Q5TDH0 399 aa16.66■□□□□ 0.26
CHUK-201ENST00000370397 VASNQ6EMK4 673 aa16.66■□□□□ 0.26
CHUK-201ENST00000370397 LRRC56Q8IYG6 542 aaPredicted RBP16.66■□□□□ 0.26
CHUK-201ENST00000370397 LILRA3Q8N6C8 439 aaPredicted RBP16.66■□□□□ 0.26
CHUK-201ENST00000370397 TCEANCQ8N8B7 351 aa16.66■□□□□ 0.26
CHUK-201ENST00000370397 SUN5Q8TC36 379 aa16.66■□□□□ 0.26
CHUK-201ENST00000370397 HDHD5Q9BXW7 423 aa16.66■□□□□ 0.26
CHUK-201ENST00000370397 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.66■□□□□ 0.26
CHUK-201ENST00000370397 TRAV19A0A0A6YYK7 116 aa16.65■□□□□ 0.26
CHUK-201ENST00000370397 QSOX1O00391 747 aa16.65■□□□□ 0.26
CHUK-201ENST00000370397 HRO43593 1189 aa16.65■□□□□ 0.26
CHUK-201ENST00000370397 TMCC2O75069 709 aa16.65■□□□□ 0.26
CHUK-201ENST00000370397 LATS1O95835 1130 aa16.65■□□□□ 0.26
CHUK-201ENST00000370397 GAAP10253 952 aa16.65■□□□□ 0.26
CHUK-201ENST00000370397 CCNJQ5T5M9 372 aa16.65■□□□□ 0.26
CHUK-201ENST00000370397 DPY19L3Q6ZPD9 716 aa16.65■□□□□ 0.26
CHUK-201ENST00000370397 CAMKK1Q8N5S9 505 aa16.65■□□□□ 0.26
CHUK-201ENST00000370397 TMEM163Q8TC26 289 aa16.65■□□□□ 0.26
CHUK-201ENST00000370397 SLC7A13Q8TCU3 470 aa16.65■□□□□ 0.26
CHUK-201ENST00000370397 TMEM203Q969S6 136 aa16.65■□□□□ 0.26
CHUK-201ENST00000370397 ATF6BQ99941 703 aa16.65■□□□□ 0.26
CHUK-201ENST00000370397 TMEM43Q9BTV4 400 aa16.65■□□□□ 0.26
CHUK-201ENST00000370397 VN1R3Q9BXE9 311 aa16.65■□□□□ 0.26
CHUK-201ENST00000370397 POLDIP3Q9BY77 421 aaKnown RBP16.65■□□□□ 0.26
CHUK-201ENST00000370397 C11orf49Q9H6J7 331 aa16.65■□□□□ 0.26
CHUK-201ENST00000370397 MVB12BQ9H7P6 319 aa16.65■□□□□ 0.26
CHUK-201ENST00000370397 CDH10Q9Y6N8 788 aa16.65■□□□□ 0.26
CHUK-201ENST00000370397 SMIM30A4D0T7 59 aa16.65■□□□□ 0.26
CHUK-201ENST00000370397 MGAT4DA6NG13 374 aa16.65■□□□□ 0.26
CHUK-201ENST00000370397 C12orf71A8MTZ7 269 aa16.65■□□□□ 0.26
CHUK-201ENST00000370397 AGRPO00253 132 aa16.65■□□□□ 0.26
CHUK-201ENST00000370397 AP2A2O94973 939 aa16.65■□□□□ 0.26
CHUK-201ENST00000370397 SLC16A8O95907 504 aa16.65■□□□□ 0.26
CHUK-201ENST00000370397 M6PRP20645 277 aa16.65■□□□□ 0.26
CHUK-201ENST00000370397 CCND3P30281 292 aaPredicted RBP16.65■□□□□ 0.26
CHUK-201ENST00000370397 MAPK12P53778 367 aa16.65■□□□□ 0.26
CHUK-201ENST00000370397 WDR45BQ5MNZ6 344 aa16.65■□□□□ 0.26
CHUK-201ENST00000370397 CD300LDQ6UXZ3 194 aa16.65■□□□□ 0.26
CHUK-201ENST00000370397 IQCF1Q8N6M8 205 aa16.65■□□□□ 0.26
CHUK-201ENST00000370397 OR9Q1Q8NGQ5 310 aa16.65■□□□□ 0.26
CHUK-201ENST00000370397 SLC38A5Q8WUX1 472 aa16.65■□□□□ 0.26
CHUK-201ENST00000370397 CLP1Q92989 425 aaKnown RBP16.65■□□□□ 0.26
CHUK-201ENST00000370397 MYNNQ9NPC7 610 aa16.65■□□□□ 0.26
CHUK-201ENST00000370397 SLAMF7Q9NQ25 335 aa16.65■□□□□ 0.26
CHUK-201ENST00000370397 MAN2C1Q9NTJ4 1040 aa16.65■□□□□ 0.26
CHUK-201ENST00000370397 TAAR2Q9P1P5 351 aa16.65■□□□□ 0.26
CHUK-201ENST00000370397 RAB23Q9ULC3 237 aa16.65■□□□□ 0.26
CHUK-201ENST00000370397 MGAT4BQ9UQ53 548 aa16.65■□□□□ 0.26
CHUK-201ENST00000370397 PCDHGB7Q9Y5F8 929 aa16.65■□□□□ 0.26
CHUK-201ENST00000370397 SNRPD2P62316 118 aaKnown RBP16.65■□□□□ 0.26
CHUK-201ENST00000370397 ALDH6A1Q02252 535 aaKnown RBP16.65■□□□□ 0.26
CHUK-201ENST00000370397 ATAT1Q5SQI0 421 aa16.65■□□□□ 0.26
CHUK-201ENST00000370397 ANGPTL8Q6UXH0 198 aa16.65■□□□□ 0.26
CHUK-201ENST00000370397 TRIM69Q86WT6 500 aa16.65■□□□□ 0.26
CHUK-201ENST00000370397 C16orf78Q8WTQ4 265 aa16.65■□□□□ 0.26
CHUK-201ENST00000370397 SKA2Q8WVK7 121 aaPredicted RBP16.65■□□□□ 0.26
CHUK-201ENST00000370397 ZNF582Q96NG8 517 aaPredicted RBP16.65■□□□□ 0.26
CHUK-201ENST00000370397 CXorf36Q9H7Y0 433 aa16.65■□□□□ 0.26
CHUK-201ENST00000370397 GULP1Q9UBP9 304 aa16.65■□□□□ 0.26
CHUK-201ENST00000370397 ICKQ9UPZ9 632 aa16.65■□□□□ 0.26
CHUK-201ENST00000370397 LRRK1Q38SD2 2015 aa16.64■□□□□ 0.26
CHUK-201ENST00000370397 LALBAP00709 142 aa16.64■□□□□ 0.25
CHUK-201ENST00000370397 TSPAN19P0C672 248 aa16.64■□□□□ 0.25
CHUK-201ENST00000370397 RPL17P18621 184 aaKnown RBP16.64■□□□□ 0.25
CHUK-201ENST00000370397 MAPK8P45983 427 aa16.64■□□□□ 0.25
CHUK-201ENST00000370397 CCL23P55773 120 aa16.64■□□□□ 0.25
CHUK-201ENST00000370397 RRAS2P62070 204 aaPredicted RBP16.64■□□□□ 0.25
CHUK-201ENST00000370397 NAE1Q13564 534 aa16.64■□□□□ 0.25
CHUK-201ENST00000370397 QPRTQ15274 297 aa16.64■□□□□ 0.25
CHUK-201ENST00000370397 OR2G6Q5TZ20 316 aa16.64■□□□□ 0.25
CHUK-201ENST00000370397 TRIM40Q6P9F5 258 aa16.64■□□□□ 0.25
CHUK-201ENST00000370397 TM9SF2Q99805 663 aa16.64■□□□□ 0.25
CHUK-201ENST00000370397 A4GNTQ9UNA3 340 aa16.64■□□□□ 0.25
CHUK-201ENST00000370397 ZSCAN5BA6NJL1 495 aa16.64■□□□□ 0.25
CHUK-201ENST00000370397 TFPIP10646 304 aa16.64■□□□□ 0.25
CHUK-201ENST00000370397 CTSOP43234 321 aaPredicted RBP16.64■□□□□ 0.25
CHUK-201ENST00000370397 XKP51811 444 aa16.64■□□□□ 0.25
CHUK-201ENST00000370397 CDK5Q00535 292 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms