RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 HSD11B1LQ7Z5J1 315 aa12.33□□□□□ -0.44
PTPRK-207ENST00000368226 OR56A3Q8NH54 315 aa12.33□□□□□ -0.44
PTPRK-207ENST00000368226 RHBDD1Q8TEB9 315 aa12.33□□□□□ -0.44
PTPRK-207ENST00000368226 CREB3L4Q8TEY5 395 aa12.33□□□□□ -0.44
PTPRK-207ENST00000368226 RANBP9Q96S59 729 aa12.33□□□□□ -0.44
PTPRK-207ENST00000368226 CD320Q9NPF0 282 aa12.33□□□□□ -0.44
PTPRK-207ENST00000368226 C14orf105Q9NVL8 296 aa12.33□□□□□ -0.44
PTPRK-207ENST00000368226 A0A096LPI6 279 aa12.33□□□□□ -0.44
PTPRK-207ENST00000368226 OR2AT4A6NND4 320 aa12.33□□□□□ -0.44
PTPRK-207ENST00000368226 HMGCLP35914 325 aa12.33□□□□□ -0.44
PTPRK-207ENST00000368226 GJA8P48165 433 aa12.33□□□□□ -0.44
PTPRK-207ENST00000368226 SH3BP2P78314 561 aa12.33□□□□□ -0.44
PTPRK-207ENST00000368226 UGT8Q16880 541 aa12.33□□□□□ -0.44
PTPRK-207ENST00000368226 LHFPL3Q86UP9 236 aa12.33□□□□□ -0.44
PTPRK-207ENST00000368226 IGFN1Q86VF2 1251 aa12.33□□□□□ -0.44
PTPRK-207ENST00000368226 SLITRK4Q8IW52 837 aa12.33□□□□□ -0.44
PTPRK-207ENST00000368226 MDGA1Q8NFP4 955 aa12.33□□□□□ -0.44
PTPRK-207ENST00000368226 GOLGA4Q13439 2230 aaKnown RBP12.32□□□□□ -0.44
PTPRK-207ENST00000368226 ZNF487B1APH4 448 aa12.32□□□□□ -0.44
PTPRK-207ENST00000368226 PLOD2O00469 737 aa12.32□□□□□ -0.44
PTPRK-207ENST00000368226 SCAMP2O15127 329 aaKnown RBP12.32□□□□□ -0.44
PTPRK-207ENST00000368226 H2BFMP0C1H6 154 aa12.32□□□□□ -0.44
PTPRK-207ENST00000368226 BMP1P13497 986 aa12.32□□□□□ -0.44
PTPRK-207ENST00000368226 PORP16435 677 aaPredicted RBP12.32□□□□□ -0.44
PTPRK-207ENST00000368226 GRK5P34947 590 aa12.32□□□□□ -0.44
PTPRK-207ENST00000368226 EIF4HQ15056 248 aaKnown RBP12.32□□□□□ -0.44
PTPRK-207ENST00000368226 CASTOR1Q8WTX7 329 aa12.32□□□□□ -0.44
PTPRK-207ENST00000368226 DAZLQ92904 295 aaKnown RBP12.32□□□□□ -0.44
PTPRK-207ENST00000368226 FOXJ1Q92949 421 aa12.32□□□□□ -0.44
PTPRK-207ENST00000368226 RADILQ96JH8 1075 aa12.32□□□□□ -0.44
PTPRK-207ENST00000368226 NECTIN4Q96NY8 510 aa12.32□□□□□ -0.44
PTPRK-207ENST00000368226 OR14I1A6ND48 311 aa12.32□□□□□ -0.44
PTPRK-207ENST00000368226 ZNF888P0CJ79 500 aaPredicted RBP12.32□□□□□ -0.44
PTPRK-207ENST00000368226 ECH1Q13011 328 aa12.32□□□□□ -0.44
PTPRK-207ENST00000368226 HNRNPA0Q13151 305 aaKnown RBP12.32□□□□□ -0.44
PTPRK-207ENST00000368226 MARCH8Q5T0T0 291 aa12.32□□□□□ -0.44
PTPRK-207ENST00000368226 LIPKQ5VXJ0 399 aa12.32□□□□□ -0.44
PTPRK-207ENST00000368226 PAQR7Q86WK9 346 aa12.32□□□□□ -0.44
PTPRK-207ENST00000368226 ZNF100Q8IYN0 542 aa12.32□□□□□ -0.44
PTPRK-207ENST00000368226 ZFP41Q8N8Y5 198 aa12.32□□□□□ -0.44
PTPRK-207ENST00000368226 ZNF565Q8N9K5 539 aa12.32□□□□□ -0.44
PTPRK-207ENST00000368226 FGF13Q92913 245 aa12.32□□□□□ -0.44
PTPRK-207ENST00000368226 ZNF334Q9HCZ1 680 aaPredicted RBP12.32□□□□□ -0.44
PTPRK-207ENST00000368226 WDR6Q9NNW5 1121 aaKnown RBP12.32□□□□□ -0.44
PTPRK-207ENST00000368226 IFT52Q9Y366 437 aa12.32□□□□□ -0.44
PTPRK-207ENST00000368226 C4BP0C0L5 1744 aa12.32□□□□□ -0.44
PTPRK-207ENST00000368226 OR5K4A6NMS3 321 aa12.32□□□□□ -0.44
PTPRK-207ENST00000368226 SGK494L7N484 410 aa12.32□□□□□ -0.44
PTPRK-207ENST00000368226 RPS15P62841 145 aaKnown RBP12.32□□□□□ -0.44
PTPRK-207ENST00000368226 CWF19L1Q69YN2 538 aaKnown RBP12.32□□□□□ -0.44
PTPRK-207ENST00000368226 SSX6Q7RTT6 188 aa12.32□□□□□ -0.44
PTPRK-207ENST00000368226 ZSCAN4Q8NAM6 433 aaPredicted RBP12.32□□□□□ -0.44
PTPRK-207ENST00000368226 GATAD2BQ8WXI9 593 aa12.32□□□□□ -0.44
PTPRK-207ENST00000368226 GADD45AP24522 165 aa12.32□□□□□ -0.44
PTPRK-207ENST00000368226 ACVR1BP36896 505 aa12.32□□□□□ -0.44
PTPRK-207ENST00000368226 RABIFP47224 123 aa12.32□□□□□ -0.44
PTPRK-207ENST00000368226 GNG2P59768 71 aa12.32□□□□□ -0.44
PTPRK-207ENST00000368226 SCAPQ12770 1279 aa12.32□□□□□ -0.44
PTPRK-207ENST00000368226 SHFQ7M4L6 423 aa12.32□□□□□ -0.44
PTPRK-207ENST00000368226 TMEM17Q86X19 198 aa12.32□□□□□ -0.44
PTPRK-207ENST00000368226 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.32□□□□□ -0.44
PTPRK-207ENST00000368226 C9orf43Q8TAL5 461 aaPredicted RBP12.32□□□□□ -0.44
PTPRK-207ENST00000368226 TOE1Q96GM8 510 aaKnown RBP12.32□□□□□ -0.44
PTPRK-207ENST00000368226 SLC2A11Q9BYW1 496 aa12.32□□□□□ -0.44
PTPRK-207ENST00000368226 RNF38Q9H0F5 515 aa12.32□□□□□ -0.44
PTPRK-207ENST00000368226 GSKIPQ9P0R6 139 aa12.32□□□□□ -0.44
PTPRK-207ENST00000368226 NWD2Q9ULI1 1742 aa12.32□□□□□ -0.44
PTPRK-207ENST00000368226 FXYD6-FXYD2A0A087WZ82 144 aa12.32□□□□□ -0.44
PTPRK-207ENST00000368226 HIDE1A8MVS5 230 aa12.32□□□□□ -0.44
PTPRK-207ENST00000368226 VSTM5A8MXK1 200 aa12.32□□□□□ -0.44
PTPRK-207ENST00000368226 ITGB8P26012 769 aa12.32□□□□□ -0.44
PTPRK-207ENST00000368226 ERVPABLB-1P60509 514 aa12.32□□□□□ -0.44
PTPRK-207ENST00000368226 PLP2Q04941 152 aa12.32□□□□□ -0.44
PTPRK-207ENST00000368226 LRFN4Q6PJG9 635 aa12.32□□□□□ -0.44
PTPRK-207ENST00000368226 PAMR1Q6UXH9 720 aa12.32□□□□□ -0.44
PTPRK-207ENST00000368226 MEX3DQ86XN8 651 aaKnown RBP12.32□□□□□ -0.44
PTPRK-207ENST00000368226 TMEM234Q8WY98 164 aa12.32□□□□□ -0.44
PTPRK-207ENST00000368226 FUBP1Q96AE4 644 aaKnown RBP12.32□□□□□ -0.44
PTPRK-207ENST00000368226 FAM46AQ96IP4 442 aaKnown RBP12.32□□□□□ -0.44
PTPRK-207ENST00000368226 MUS81Q96NY9 551 aa12.32□□□□□ -0.44
PTPRK-207ENST00000368226 FXYD6Q9H0Q3 95 aa12.32□□□□□ -0.44
PTPRK-207ENST00000368226 GPRC5BQ9NZH0 403 aa12.32□□□□□ -0.44
PTPRK-207ENST00000368226 ERVK-18Q9QC07 812 aa12.32□□□□□ -0.44
PTPRK-207ENST00000368226 MGAT4BQ9UQ53 548 aa12.32□□□□□ -0.44
PTPRK-207ENST00000368226 NPIPA5A0A0B4J1W7 369 aa12.31□□□□□ -0.44
PTPRK-207ENST00000368226 NPIPA7E9PJI5 369 aa12.31□□□□□ -0.44
PTPRK-207ENST00000368226 SLC22A1O15245 554 aa12.31□□□□□ -0.44
PTPRK-207ENST00000368226 VNN2O95498 520 aa12.31□□□□□ -0.44
PTPRK-207ENST00000368226 NPIPA8P0DM63 369 aa12.31□□□□□ -0.44
PTPRK-207ENST00000368226 HNRNPA2B1P22626 353 aaKnown RBP12.31□□□□□ -0.44
PTPRK-207ENST00000368226 WDR53Q7Z5U6 358 aaPredicted RBP12.31□□□□□ -0.44
PTPRK-207ENST00000368226 VTCN1Q7Z7D3 282 aa12.31□□□□□ -0.44
PTPRK-207ENST00000368226 PDSS2Q86YH6 399 aa12.31□□□□□ -0.44
PTPRK-207ENST00000368226 PLXDC1Q8IUK5 500 aa12.31□□□□□ -0.44
PTPRK-207ENST00000368226 SLC39A11Q8N1S5 342 aa12.31□□□□□ -0.44
PTPRK-207ENST00000368226 RHEBL1Q8TAI7 183 aa12.31□□□□□ -0.44
PTPRK-207ENST00000368226 MOAP1Q96BY2 351 aa12.31□□□□□ -0.44
PTPRK-207ENST00000368226 TMCO6Q96DC7 493 aa12.31□□□□□ -0.44
PTPRK-207ENST00000368226 INPP5KQ9BT40 448 aa12.31□□□□□ -0.44
PTPRK-207ENST00000368226 DOHHQ9BU89 302 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms