RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 MYRFLQ96LU7 910 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 PRTFDC1Q9NRG1 225 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 COL1A1P02452 1464 aaPredicted RBP9.3□□□□□ -0.92
CUX1-203ENST00000360264 C2orf72A6NCS6 295 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 PDLIM1O00151 329 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 ZNF821O75541 412 aaPredicted RBP9.3□□□□□ -0.92
CUX1-203ENST00000360264 TMEM205Q6UW68 189 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 ZNF517Q6ZMY9 492 aaPredicted RBP9.3□□□□□ -0.92
CUX1-203ENST00000360264 EBF3Q9H4W6 596 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 PRSS51A0A1B0GVH4 220 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 CREG1O75629 220 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 RNH1P13489 461 aaKnown RBP9.3□□□□□ -0.92
CUX1-203ENST00000360264 ZNF598Q86UK7 904 aaKnown RBP9.3□□□□□ -0.92
CUX1-203ENST00000360264 CPT1CQ8TCG5 803 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 GATAD2BQ8WXI9 593 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 CDCA3Q99618 268 aaPredicted RBP9.3□□□□□ -0.92
CUX1-203ENST00000360264 PIP5K1AQ99755 562 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 CCSER2Q9H7U1 834 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 AKTIPQ9H8T0 292 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 NLE1Q9NVX2 485 aaPredicted RBP9.3□□□□□ -0.92
CUX1-203ENST00000360264 KIAA2026Q5HYC2 2103 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 LMO7Q8WWI1 1683 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 M0R233 179 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 PGCP20142 388 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 SLC26A5P58743 744 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 MLLT1Q03111 559 aaPredicted RBP9.3□□□□□ -0.92
CUX1-203ENST00000360264 A8MVJ9 347 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 CDNFQ49AH0 187 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 NANSQ9NR45 359 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 KHNYNO15037 678 aaKnown RBP9.29□□□□□ -0.92
CUX1-203ENST00000360264 DLSTP36957 453 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 CLCN2P51788 898 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 POLR2HP52434 150 aaKnown RBP9.29□□□□□ -0.92
CUX1-203ENST00000360264 PLCXD2Q0VAA5 305 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 CANT1Q8WVQ1 401 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 COQ4Q9Y3A0 265 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 C2orf92A0A1B0GVN3 265 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 G6PDP11413 515 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 HNF1BP35680 557 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 SIRPB2Q5JXA9 342 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 SLC2A7Q6PXP3 512 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 MAMDC2Q7Z304 686 aaPredicted RBP9.29□□□□□ -0.92
CUX1-203ENST00000360264 CARM1Q86X55 608 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 SPTSSAQ969W0 71 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 SLC22A31A6NKX4 558 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 GTF2F2P13984 249 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 TYRP1P17643 537 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 FRKP42685 505 aaPredicted RBP9.29□□□□□ -0.92
CUX1-203ENST00000360264 RCAN2Q14206 197 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 KHDC1Q4VXA5 237 aaKnown RBP9.29□□□□□ -0.92
CUX1-203ENST00000360264 TMEM201Q5SNT2 666 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 CCDC120Q96HB5 630 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 TMLHEQ9NVH6 421 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 KLF8O95600 359 aaPredicted RBP9.29□□□□□ -0.92
CUX1-203ENST00000360264 RTL10Q7L3V2 364 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 COMTD1Q86VU5 262 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 RHEBL1Q8TAI7 183 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 SULT4A1Q9BR01 284 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 YIPF4Q9BSR8 244 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 TMEM45AQ9NWC5 275 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 EMC3Q9P0I2 261 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 KCNK6Q9Y257 313 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 HIF3AQ9Y2N7 669 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 GPR89AB7ZAQ6 455 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 D6RAR5 112 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 FGF18O76093 207 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 CDRT1O95170 752 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 KCNK5O95279 499 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 GPR89BP0CG08 455 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 CD40LGP29965 261 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 HOXA9P31269 272 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 ARSFP54793 590 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 PSMA6P60900 246 aaKnown RBP9.29□□□□□ -0.92
CUX1-203ENST00000360264 SLAMF1Q13291 335 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 SOWAHAQ2M3V2 549 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 TXNDC8Q6A555 127 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 PARPBPQ9NWS1 579 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 SOWAHBA6NEL2 793 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 UFM1P61960 85 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 ANKDD1AQ495B1 522 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 TRAPPC6BQ86SZ2 158 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 FOXRED2Q8IWF2 684 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 HS3ST5Q8IZT8 346 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 PLD6Q8N2A8 252 aaKnown RBP9.29□□□□□ -0.92
CUX1-203ENST00000360264 SPIN2AQ99865 258 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 SPIN2BQ9BPZ2 258 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 IRF2BPLQ9H1B7 796 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 TAS2R8Q9NYW2 309 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 EPHA6Q9UF33 1036 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 CHRNB2P17787 502 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 TAS2R31P59538 309 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 RPL6Q02878 288 aaKnown RBP9.29□□□□□ -0.92
CUX1-203ENST00000360264 UEVLDQ8IX04 471 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 RRNAD1Q96FB5 475 aaKnown RBP9.29□□□□□ -0.92
CUX1-203ENST00000360264 FBXL18Q96ME1 805 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 COL3A1P02461 1466 aaPredicted RBP9.29□□□□□ -0.92
CUX1-203ENST00000360264 COL14A1Q05707 1796 aaKnown RBP9.29□□□□□ -0.92
CUX1-203ENST00000360264 SLITRK5O94991 958 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 ACRP10323 421 aa9.29□□□□□ -0.92
CUX1-203ENST00000360264 ZNF43P17038 809 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms