RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 PTPN4P29074 926 aa23.79■■□□□ 1.4
SSBP3-202ENST00000357475 IGLV3-21P80748 117 aaPredicted RBP23.79■■□□□ 1.4
SSBP3-202ENST00000357475 RCAN2Q14206 197 aa23.79■■□□□ 1.4
SSBP3-202ENST00000357475 TIGD2Q4W5G0 525 aa23.79■■□□□ 1.4
SSBP3-202ENST00000357475 ANKRD46Q86W74 232 aa23.79■■□□□ 1.4
SSBP3-202ENST00000357475 PLPP5Q8NEB5 264 aa23.79■■□□□ 1.4
SSBP3-202ENST00000357475 SUN3Q8TAQ9 357 aa23.79■■□□□ 1.4
SSBP3-202ENST00000357475 ERP27Q96DN0 273 aa23.79■■□□□ 1.4
SSBP3-202ENST00000357475 ZNF764Q96H86 408 aaPredicted RBP23.79■■□□□ 1.4
SSBP3-202ENST00000357475 LRRC37BQ96QE4 947 aa23.79■■□□□ 1.4
SSBP3-202ENST00000357475 DUSP26Q9BV47 211 aa23.79■■□□□ 1.4
SSBP3-202ENST00000357475 NXT1Q9UKK6 140 aaKnown RBP23.79■■□□□ 1.4
SSBP3-202ENST00000357475 ANGPTL2Q9UKU9 493 aa23.79■■□□□ 1.4
SSBP3-202ENST00000357475 NUP214P35658 2090 aaPredicted RBP23.79■■□□□ 1.4
SSBP3-202ENST00000357475 BLACEA4D250 179 aa23.79■■□□□ 1.4
SSBP3-202ENST00000357475 DCTN3O75935 186 aa23.79■■□□□ 1.4
SSBP3-202ENST00000357475 S100A3P33764 101 aa23.79■■□□□ 1.4
SSBP3-202ENST00000357475 FOLR3P41439 243 aa23.79■■□□□ 1.4
SSBP3-202ENST00000357475 PCBP4P57723 403 aaKnown RBP23.79■■□□□ 1.4
SSBP3-202ENST00000357475 RPS15P62841 145 aaKnown RBP23.79■■□□□ 1.4
SSBP3-202ENST00000357475 IRX1P78414 480 aaPredicted RBP23.79■■□□□ 1.4
SSBP3-202ENST00000357475 STX4Q12846 297 aa23.79■■□□□ 1.4
SSBP3-202ENST00000357475 NSDHLQ15738 373 aa23.79■■□□□ 1.4
SSBP3-202ENST00000357475 VPS26BQ4G0F5 336 aa23.79■■□□□ 1.4
SSBP3-202ENST00000357475 CLECL1Q8IZS7 167 aa23.79■■□□□ 1.4
SSBP3-202ENST00000357475 GLB1L3Q8NCI6 653 aaPredicted RBP23.79■■□□□ 1.4
SSBP3-202ENST00000357475 OR8J2Q8NGG1 315 aa23.79■■□□□ 1.4
SSBP3-202ENST00000357475 C8orf44Q96CB5 159 aa23.79■■□□□ 1.4
SSBP3-202ENST00000357475 ERVK-11Q9UQG0 969 aa23.79■■□□□ 1.4
SSBP3-202ENST00000357475 ZNF780BQ9Y6R6 833 aa23.79■■□□□ 1.4
SSBP3-202ENST00000357475 CAPN7Q9Y6W3 813 aa23.79■■□□□ 1.4
SSBP3-202ENST00000357475 IGHV3-20A0A0C4DH32 117 aa23.78■■□□□ 1.4
SSBP3-202ENST00000357475 CAPN14A8MX76 684 aa23.78■■□□□ 1.4
SSBP3-202ENST00000357475 MYO1GB0I1T2 1018 aa23.78■■□□□ 1.4
SSBP3-202ENST00000357475 PDPK1O15530 556 aa23.78■■□□□ 1.4
SSBP3-202ENST00000357475 SCN2BO60939 215 aa23.78■■□□□ 1.4
SSBP3-202ENST00000357475 ALOX12BO75342 701 aa23.78■■□□□ 1.4
SSBP3-202ENST00000357475 PGRP06401 933 aa23.78■■□□□ 1.4
SSBP3-202ENST00000357475 CPMP14384 443 aa23.78■■□□□ 1.4
SSBP3-202ENST00000357475 WT1P19544 449 aaPredicted RBP23.78■■□□□ 1.4
SSBP3-202ENST00000357475 RPL3P39023 403 aaKnown RBP23.78■■□□□ 1.4
SSBP3-202ENST00000357475 KIR3DL1P43629 444 aa23.78■■□□□ 1.4
SSBP3-202ENST00000357475 IL10RAQ13651 578 aa23.78■■□□□ 1.4
SSBP3-202ENST00000357475 LTB4RQ15722 352 aa23.78■■□□□ 1.4
SSBP3-202ENST00000357475 CEBPEQ15744 281 aa23.78■■□□□ 1.4
SSBP3-202ENST00000357475 CCDC116Q8IYX3 515 aa23.78■■□□□ 1.4
SSBP3-202ENST00000357475 POU5F2Q8N7G0 328 aa23.78■■□□□ 1.4
SSBP3-202ENST00000357475 STARD8Q92502 1023 aa23.78■■□□□ 1.4
SSBP3-202ENST00000357475 FGF11Q92914 225 aa23.78■■□□□ 1.4
SSBP3-202ENST00000357475 PRPF18Q99633 342 aaKnown RBP23.78■■□□□ 1.4
SSBP3-202ENST00000357475 GPR87Q9BY21 358 aa23.78■■□□□ 1.4
SSBP3-202ENST00000357475 BHLHE41Q9C0J9 482 aaPredicted RBP23.78■■□□□ 1.4
SSBP3-202ENST00000357475 GLIPR2Q9H4G4 154 aa23.78■■□□□ 1.4
SSBP3-202ENST00000357475 GPN2Q9H9Y4 310 aaPredicted RBP23.78■■□□□ 1.4
SSBP3-202ENST00000357475 TCRBV16S1A1N1A0A5B0 115 aa23.77■■□□□ 1.4
SSBP3-202ENST00000357475 PLIN5Q00G26 463 aa23.77■■□□□ 1.4
SSBP3-202ENST00000357475 SRSF11Q05519 484 aaKnown RBP23.77■■□□□ 1.4
SSBP3-202ENST00000357475 ZNF551Q7Z340 670 aaPredicted RBP23.77■■□□□ 1.4
SSBP3-202ENST00000357475 ANKRD37Q7Z713 158 aa23.77■■□□□ 1.4
SSBP3-202ENST00000357475 SPDL1Q96EA4 605 aa23.77■■□□□ 1.4
SSBP3-202ENST00000357475 AMDHD1Q96NU7 426 aa23.77■■□□□ 1.4
SSBP3-202ENST00000357475 OR52E6Q96RD3 313 aa23.77■■□□□ 1.4
SSBP3-202ENST00000357475 BBS4Q96RK4 519 aa23.77■■□□□ 1.4
SSBP3-202ENST00000357475 PSME2Q9UL46 239 aa23.77■■□□□ 1.4
SSBP3-202ENST00000357475 MAPRE3Q9UPY8 281 aa23.77■■□□□ 1.4
SSBP3-202ENST00000357475 ENTPD4Q9Y227 616 aa23.77■■□□□ 1.4
SSBP3-202ENST00000357475 PADI2Q9Y2J8 665 aa23.77■■□□□ 1.4
SSBP3-202ENST00000357475 LOC100653049A0A140TA62 436 aa23.76■■□□□ 1.39
SSBP3-202ENST00000357475 A8MUA0 341 aa23.76■■□□□ 1.39
SSBP3-202ENST00000357475 KRT34O76011 436 aa23.76■■□□□ 1.39
SSBP3-202ENST00000357475 SOX18P35713 384 aa23.76■■□□□ 1.39
SSBP3-202ENST00000357475 FRKP42685 505 aaPredicted RBP23.76■■□□□ 1.39
SSBP3-202ENST00000357475 KCNK10P57789 538 aa23.76■■□□□ 1.39
SSBP3-202ENST00000357475 SLC2A7Q6PXP3 512 aa23.76■■□□□ 1.39
SSBP3-202ENST00000357475 SNX32Q86XE0 403 aa23.76■■□□□ 1.39
SSBP3-202ENST00000357475 ADCY4Q8NFM4 1077 aa23.76■■□□□ 1.39
SSBP3-202ENST00000357475 OR9A2Q8NGT5 310 aa23.76■■□□□ 1.39
SSBP3-202ENST00000357475 ATAD3AQ9NVI7 634 aa23.76■■□□□ 1.39
SSBP3-202ENST00000357475 PCDHGA6Q9Y5G7 932 aa23.76■■□□□ 1.39
SSBP3-202ENST00000357475 HS3ST3B1Q9Y662 390 aa23.76■■□□□ 1.39
SSBP3-202ENST00000357475 CFAP47Q6ZTR5 3102 aa23.76■■□□□ 1.39
SSBP3-202ENST00000357475 DMXL2Q8TDJ6 3036 aa23.75■■□□□ 1.39
SSBP3-202ENST00000357475 C6orf47O95873 294 aa23.75■■□□□ 1.39
SSBP3-202ENST00000357475 CAPNS1P04632 268 aa23.75■■□□□ 1.39
SSBP3-202ENST00000357475 IL6P05231 212 aa23.75■■□□□ 1.39
SSBP3-202ENST00000357475 PORP16435 677 aaPredicted RBP23.75■■□□□ 1.39
SSBP3-202ENST00000357475 PCSK2P16519 638 aa23.75■■□□□ 1.39
SSBP3-202ENST00000357475 CSNK2A2P19784 350 aaPredicted RBP23.75■■□□□ 1.39
SSBP3-202ENST00000357475 ADSLP30566 484 aaPredicted RBP23.75■■□□□ 1.39
SSBP3-202ENST00000357475 NCBP2P52298 156 aaKnown RBP eCLIP23.75■■□□□ 1.39
SSBP3-202ENST00000357475 DPY19L1Q2PZI1 675 aa23.75■■□□□ 1.39
SSBP3-202ENST00000357475 TMEM205Q6UW68 189 aa23.75■■□□□ 1.39
SSBP3-202ENST00000357475 LRRC25Q8N386 305 aaPredicted RBP23.75■■□□□ 1.39
SSBP3-202ENST00000357475 INPP5KQ9BT40 448 aa23.75■■□□□ 1.39
SSBP3-202ENST00000357475 PNO1Q9NRX1 252 aaKnown RBP23.75■■□□□ 1.39
SSBP3-202ENST00000357475 APC2O95996 2303 aa23.75■■□□□ 1.39
SSBP3-202ENST00000357475 CCDC154A6NI56 674 aa23.74■■□□□ 1.39
SSBP3-202ENST00000357475 FBP2O00757 339 aa23.74■■□□□ 1.39
SSBP3-202ENST00000357475 SNRPB2P08579 225 aaKnown RBP23.74■■□□□ 1.39
SSBP3-202ENST00000357475 SLC35E2P0CK97 266 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms