RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 RBMS2Q15434 407 aaKnown RBP6.31□□□□□ -1.4
VPS13B-202ENST00000357162 UQCC3Q6UW78 93 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 GSG1LQ6UXU4 331 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 REEP4Q9H6H4 257 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 KCNJ16Q9NPI9 418 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 Q9Y3F1 56 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 PCDHB14Q9Y5E9 798 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 RNASET2O00584 256 aaKnown RBP6.31□□□□□ -1.4
VPS13B-202ENST00000357162 TLX2O43763 284 aaPredicted RBP6.31□□□□□ -1.4
VPS13B-202ENST00000357162 CDRT1O95170 752 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 RAB4AP20338 218 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 HK3P52790 923 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 WACQ9BTA9 647 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 ZDHHC5Q9C0B5 715 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 FBRSQ9HAH7 460 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 ANKRD31Q8N7Z5 1873 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 MAST2Q6P0Q8 1798 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 SMIM28A0A1B0GU29 152 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 ELOA3DA6NLF2 546 aaPredicted RBP6.31□□□□□ -1.4
VPS13B-202ENST00000357162 BRCC3P46736 316 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 DUSP4Q13115 394 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 PPIGQ13427 754 aaKnown RBP eCLIP6.31□□□□□ -1.42e-6■■■□□ 15.1
VPS13B-202ENST00000357162 ELOA3BQ3SY89 546 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 CCSAPQ6IQ19 270 aaPredicted RBP6.31□□□□□ -1.4
VPS13B-202ENST00000357162 RTL10Q7L3V2 364 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 ZSCAN1Q8NBB4 408 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 ELOA3Q8NG57 546 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 ZNF417Q8TAU3 575 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 KCNS3Q9BQ31 491 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 CDC7O00311 574 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 H2AFB2P0C5Z0 115 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 MTPNP58546 118 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 ARFRP1Q13795 201 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 NIPAL3Q6P499 406 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 SLC22A25Q6T423 547 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 GNPDA2Q8TDQ7 276 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 ADAM7Q9H2U9 754 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 MVB12BQ9H7P6 319 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 ABCB8Q9NUT2 735 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 PADI2Q9Y2J8 665 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 ENPP4Q9Y6X5 453 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 ANKRD63C9JTQ0 380 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 SSX4O60224 188 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 ALPPL2P10696 532 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 NDUFV1P49821 464 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 DUSP6Q16828 381 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 TBC1D25Q3MII6 688 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 CHST4Q8NCG5 386 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 OR51B5Q9H339 312 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 FAM105AQ9NUU6 356 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 BTNL2Q9UIR0 455 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 MYLKQ15746 1914 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 IQCMA0A1B0GVH7 501 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 GGT3PA6NGU5 568 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 PEX10O60683 326 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 DIRAS3O95661 229 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 TFP02787 698 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 SMIM10L2AP0DMW4 78 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 SMIM10L2BP0DMW5 78 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 CDH15P55291 814 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 MC2RQ01718 297 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 BDH1Q02338 343 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 SLC15A4Q8N697 577 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 OR6T1Q8NGN1 323 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 MFSD8Q8NHS3 518 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 OR10A4Q9H209 315 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 TIAM2Q8IVF5 1701 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 VAMP1P23763 118 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 CCND3P30281 292 aaPredicted RBP6.31□□□□□ -1.4
VPS13B-202ENST00000357162 TAS2R19P59542 299 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 NOMO2Q5JPE7 1267 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 DACT2Q5SW24 774 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 OR5B17Q8NGF7 314 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 SMARCD2Q92925 531 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 NELL2Q99435 816 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 C20orf202A1L168 122 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 C12orf71A8MTZ7 269 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 UBE2Q2LH0YL09 131 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 SDHDO14521 159 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 SEC14L5O43304 696 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 BANF1O75531 89 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 HLA-DMAP28067 261 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 AQP1P29972 269 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 TIA1P31483 386 aaKnown RBP eCLIP6.31□□□□□ -1.4
VPS13B-202ENST00000357162 RAG2P55895 527 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 SNRPGP62308 76 aaKnown RBP6.31□□□□□ -1.4
VPS13B-202ENST00000357162 PMS2P3Q13401 168 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 CDK10Q15131 360 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 FAM205BPQ63HN1 556 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 CEACAM20Q6UY09 585 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 YIPF7Q8N8F6 280 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 NEK7Q8TDX7 302 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 SDHAF3Q9NRP4 125 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 TEX13DA0A0J9YY54 714 aaPredicted RBP6.31□□□□□ -1.4
VPS13B-202ENST00000357162 OR4F21O95013 312 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 PTPRAP18433 802 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 ITGA3P26006 1051 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 KCNC1P48547 511 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 GPX6P59796 221 aa6.31□□□□□ -1.4
VPS13B-202ENST00000357162 ZNF155Q12901 538 aaPredicted RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms