RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 SOX14O95416 240 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 MT-CO2P00403 227 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 P04436 131 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 JUPP14923 745 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 ZNF182P17025 639 aaPredicted RBP6.2□□□□□ -1.42
UPF2-201ENST00000356352 PRKCAP17252 672 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 CKMT2P17540 419 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 TYRP1P17643 537 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 RHCEP18577 417 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 HTR1EP28566 365 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 GGT2P36268 569 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 LEPRP48357 1165 aaKnown RBP6.2□□□□□ -1.42
UPF2-201ENST00000356352 MAN2A2P49641 1150 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 GABARAPL2P60520 117 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 UBE2NP61088 152 aaKnown RBP6.2□□□□□ -1.42
UPF2-201ENST00000356352 RCAN2Q14206 197 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 PCLAFQ15004 111 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 USF2Q15853 346 aaPredicted RBP6.2□□□□□ -1.42
UPF2-201ENST00000356352 PLXDC1Q8IUK5 500 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 GALNT12Q8IXK2 581 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 CCDC71LQ8N9Z2 235 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 IL17RCQ8NAC3 791 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 LSM14AQ8ND56 463 aaKnown RBP6.2□□□□□ -1.42
UPF2-201ENST00000356352 OR51G2Q8NGK0 314 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 OR8S1Q8NH09 359 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 FOXJ1Q92949 421 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 PKP2Q99959 881 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 TREX2Q9BQ50 279 aaPredicted RBP6.2□□□□□ -1.42
UPF2-201ENST00000356352 HDHD5Q9BXW7 423 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 RGCCQ9H4X1 137 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 EVA1AQ9H8M9 152 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 WDR6Q9NNW5 1121 aaKnown RBP6.2□□□□□ -1.42
UPF2-201ENST00000356352 TBCCD1Q9NVR7 557 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 POU2F3Q9UKI9 436 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 SCML1Q9UN30 329 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 WDR37Q9Y2I8 494 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 TCRBV7S3A2A0A539 114 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 GXYLT2A0PJZ3 443 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 WTIPA6NIX2 430 aaPredicted RBP6.2□□□□□ -1.42
UPF2-201ENST00000356352 FOXO6A8MYZ6 492 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 H7C2Y5 167 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 I3L521 148 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 TULP2O00295 520 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 MMP2P08253 660 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 WDR4P57081 412 aaKnown RBP6.2□□□□□ -1.42
UPF2-201ENST00000356352 PSPHP78330 225 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 CCL14Q16627 93 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 LY6G5CQ5SRR4 150 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 SLC18B1Q6NT16 456 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 CTU1Q7Z7A3 348 aaKnown RBP6.2□□□□□ -1.42
UPF2-201ENST00000356352 RELL1Q8IUW5 271 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 CENPSQ8N2Z9 138 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 WDSUB1Q8N9V3 476 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 NEIL3Q8TAT5 605 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 GATAD2BQ8WXI9 593 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 BRI3BPQ8WY22 251 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 ZNF689Q96CS4 500 aaPredicted RBP6.2□□□□□ -1.42
UPF2-201ENST00000356352 SH3YL1Q96HL8 342 aaPredicted RBP6.2□□□□□ -1.42
UPF2-201ENST00000356352 IGSF21Q96ID5 467 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 HERC2P3Q9BVR0 1158 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 ADAMTS10Q9H324 1103 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 NSUN3Q9H649 340 aaKnown RBP6.2□□□□□ -1.42
UPF2-201ENST00000356352 ABRACLQ9P1F3 81 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 RARRES3Q9UL19 164 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 CYP8B1Q9UNU6 501 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 HIF3AQ9Y2N7 669 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 EEDO75530 441 aaKnown RBP6.2□□□□□ -1.42
UPF2-201ENST00000356352 RASAL1O95294 804 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 F2P00734 622 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 CD63P08962 238 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 OR12D1P0DN82 309 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 S100A7P31151 101 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 ARSFP54793 590 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 SLC26A5P58743 744 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 BNIP3Q12983 259 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 GRM2Q14416 872 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 TCEAL1Q15170 157 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 ODF4Q2M2E3 257 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 PIGGQ5H8A4 983 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 BCL2L15Q5TBC7 163 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 MANEALQ5VSG8 457 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 CSNK1A1LQ8N752 337 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 SAMD12Q8N8I0 201 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 OR8J1Q8NGP2 316 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 RPLP0P6Q8NHW5 317 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 C17orf50Q8WW18 174 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 SPRYD4Q8WW59 207 aaPredicted RBP6.2□□□□□ -1.42
UPF2-201ENST00000356352 OR1F2PQ96R84 312 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 SYT3Q9BQG1 590 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 MEAF6Q9HAF1 191 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 ACSL6Q9UKU0 697 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 OR6C74A6NCV1 312 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 ZNF850A8MQ14 1090 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 EIF3FO00303 357 aaPredicted RBP6.2□□□□□ -1.42
UPF2-201ENST00000356352 ANKRD28O15084 1053 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 LAMTOR5O43504 91 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 LEFTY1O75610 366 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 ATE1O95260 518 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 SFTPBP07988 381 aa6.2□□□□□ -1.42
UPF2-201ENST00000356352 UCHL1P09936 223 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms