RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 ZNF160Q9HCG1 818 aa3.72□□□□□ -1.81
CNOT4-202ENST00000356162 TNFRSF12AQ9NP84 129 aa3.72□□□□□ -1.81
CNOT4-202ENST00000356162 NECTIN3Q9NQS3 549 aa3.72□□□□□ -1.81
CNOT4-202ENST00000356162 C5AR2Q9P296 337 aa3.72□□□□□ -1.81
CNOT4-202ENST00000356162 HAO1Q9UJM8 370 aa3.72□□□□□ -1.81
CNOT4-202ENST00000356162 FBXW2Q9UKT8 454 aa3.72□□□□□ -1.81
CNOT4-202ENST00000356162 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.72□□□□□ -1.81
CNOT4-202ENST00000356162 TIMM22Q9Y584 194 aa3.72□□□□□ -1.81
CNOT4-202ENST00000356162 SEC16AO15027 2179 aa3.72□□□□□ -1.81
CNOT4-202ENST00000356162 FAM227AF5H4B4 570 aa3.71□□□□□ -1.81
CNOT4-202ENST00000356162 PROM1O43490 865 aa3.71□□□□□ -1.81
CNOT4-202ENST00000356162 CTNSO60931 367 aa3.71□□□□□ -1.81
CNOT4-202ENST00000356162 MYO1DO94832 1006 aa3.71□□□□□ -1.81
CNOT4-202ENST00000356162 SEC24DO94855 1032 aaPredicted RBP3.71□□□□□ -1.81
CNOT4-202ENST00000356162 PDGFAP04085 211 aa3.71□□□□□ -1.81
CNOT4-202ENST00000356162 ALPPP05187 535 aa3.71□□□□□ -1.81
CNOT4-202ENST00000356162 KLK1P06870 262 aa3.71□□□□□ -1.81
CNOT4-202ENST00000356162 CHRNGP07510 517 aa3.71□□□□□ -1.81
CNOT4-202ENST00000356162 FAM87AP0C7U9 286 aa3.71□□□□□ -1.81
CNOT4-202ENST00000356162 ICAM2P13598 275 aa3.71□□□□□ -1.81
CNOT4-202ENST00000356162 CHN1P15882 459 aa3.71□□□□□ -1.81
CNOT4-202ENST00000356162 MAOAP21397 527 aa3.71□□□□□ -1.81
CNOT4-202ENST00000356162 BGNP21810 368 aa3.71□□□□□ -1.81
CNOT4-202ENST00000356162 ITGA3P26006 1051 aa3.71□□□□□ -1.81
CNOT4-202ENST00000356162 GALNSP34059 522 aa3.71□□□□□ -1.81
CNOT4-202ENST00000356162 EIF1AXP47813 144 aaKnown RBP3.71□□□□□ -1.81
CNOT4-202ENST00000356162 HNRNPFP52597 415 aaKnown RBP3.71□□□□□ -1.81
CNOT4-202ENST00000356162 MAPK12P53778 367 aa3.71□□□□□ -1.81
CNOT4-202ENST00000356162 SLC26A5P58743 744 aa3.71□□□□□ -1.81
CNOT4-202ENST00000356162 BTG2P78543 158 aa3.71□□□□□ -1.81
CNOT4-202ENST00000356162 PLIN5Q00G26 463 aa3.71□□□□□ -1.81
CNOT4-202ENST00000356162 ACTN3Q08043 901 aaPredicted RBP3.71□□□□□ -1.81
CNOT4-202ENST00000356162 ZNF763Q0D2J5 394 aa3.71□□□□□ -1.81
CNOT4-202ENST00000356162 SLC13A2Q13183 592 aa3.71□□□□□ -1.81
CNOT4-202ENST00000356162 STX3Q13277 289 aa3.71□□□□□ -1.81
CNOT4-202ENST00000356162 MPP2Q14168 576 aa3.71□□□□□ -1.81
CNOT4-202ENST00000356162 ELAVL1Q15717 326 aaKnown RBP3.71□□□□□ -1.81
CNOT4-202ENST00000356162 NSDHLQ15738 373 aa3.71□□□□□ -1.81
CNOT4-202ENST00000356162 XKR7Q5GH72 579 aa3.71□□□□□ -1.81
CNOT4-202ENST00000356162 CRB2Q5IJ48 1285 aa3.71□□□□□ -1.81
CNOT4-202ENST00000356162 SH2D4BQ5SQS7 431 aa3.71□□□□□ -1.81
CNOT4-202ENST00000356162 CCNYL2Q5T2Q4 361 aa3.71□□□□□ -1.81
CNOT4-202ENST00000356162 CLEC6AQ6EIG7 209 aa3.71□□□□□ -1.81
CNOT4-202ENST00000356162 TCTN3Q6NUS6 607 aa3.71□□□□□ -1.81
CNOT4-202ENST00000356162 GALNT18Q6P9A2 607 aa3.71□□□□□ -1.81
CNOT4-202ENST00000356162 CLYBLQ8N0X4 340 aa3.71□□□□□ -1.81
CNOT4-202ENST00000356162 LGI4Q8N135 537 aa3.71□□□□□ -1.81
CNOT4-202ENST00000356162 TMEM132CQ8N3T6 1108 aa3.71□□□□□ -1.81
CNOT4-202ENST00000356162 EXD3Q8N9H8 876 aa3.71□□□□□ -1.81
CNOT4-202ENST00000356162 OR14A16Q8NHC5 309 aa3.71□□□□□ -1.81
CNOT4-202ENST00000356162 TM9SF4Q92544 642 aa3.71□□□□□ -1.81
CNOT4-202ENST00000356162 MEGF10Q96KG7 1140 aa3.71□□□□□ -1.81
CNOT4-202ENST00000356162 ART5Q96L15 291 aa3.71□□□□□ -1.81
CNOT4-202ENST00000356162 IMMP1LQ96LU5 166 aa3.71□□□□□ -1.81
CNOT4-202ENST00000356162 PTCHD1Q96NR3 888 aa3.71□□□□□ -1.81
CNOT4-202ENST00000356162 CCT7Q99832 543 aa3.71□□□□□ -1.81
CNOT4-202ENST00000356162 MRPL1Q9BYD6 325 aaKnown RBP3.71□□□□□ -1.81
CNOT4-202ENST00000356162 LRTM1Q9HBL6 345 aa3.71□□□□□ -1.81
CNOT4-202ENST00000356162 MLXIPLQ9NP71 852 aa3.71□□□□□ -1.81
CNOT4-202ENST00000356162 MMP25Q9NPA2 562 aa3.71□□□□□ -1.81
CNOT4-202ENST00000356162 PFDN4Q9NQP4 134 aa3.71□□□□□ -1.81
CNOT4-202ENST00000356162 GPR83Q9NYM4 423 aa3.71□□□□□ -1.81
CNOT4-202ENST00000356162 PPIEQ9UNP9 301 aaKnown RBP3.71□□□□□ -1.81
CNOT4-202ENST00000356162 WBP11Q9Y2W2 641 aaKnown RBP3.71□□□□□ -1.81
CNOT4-202ENST00000356162 TMED5Q9Y3A6 229 aa3.71□□□□□ -1.81
CNOT4-202ENST00000356162 RAP2CQ9Y3L5 183 aa3.71□□□□□ -1.81
CNOT4-202ENST00000356162 ATG4BQ9Y4P1 393 aa3.71□□□□□ -1.81
CNOT4-202ENST00000356162 PCDHA9Q9Y5H5 950 aa3.71□□□□□ -1.81
CNOT4-202ENST00000356162 CLDN16Q9Y5I7 305 aa3.71□□□□□ -1.81
CNOT4-202ENST00000356162 KMT2BQ9UMN6 2715 aaPredicted RBP3.71□□□□□ -1.82
CNOT4-202ENST00000356162 TNRC6AQ8NDV7 1962 aaKnown RBP3.71□□□□□ -1.82
CNOT4-202ENST00000356162 CHD8Q9HCK8 2581 aa3.71□□□□□ -1.82
CNOT4-202ENST00000356162 A0A1W2PR48 441 aa3.71□□□□□ -1.82
CNOT4-202ENST00000356162 C1orf226A1L170 272 aa3.71□□□□□ -1.82
CNOT4-202ENST00000356162 WDR91A4D1P6 747 aa3.71□□□□□ -1.82
CNOT4-202ENST00000356162 KLF11O14901 512 aa3.71□□□□□ -1.82
CNOT4-202ENST00000356162 PIP5K1BO14986 540 aa3.71□□□□□ -1.82
CNOT4-202ENST00000356162 FGF17O60258 216 aa3.71□□□□□ -1.82
CNOT4-202ENST00000356162 DPM1O60762 260 aa3.71□□□□□ -1.82
CNOT4-202ENST00000356162 SMNDC1O75940 238 aaKnown RBP eCLIP3.71□□□□□ -1.82
CNOT4-202ENST00000356162 DNAJB5O75953 348 aa3.71□□□□□ -1.82
CNOT4-202ENST00000356162 PRR35P0CG20 571 aa3.71□□□□□ -1.82
CNOT4-202ENST00000356162 COX7A2P14406 83 aa3.71□□□□□ -1.82
CNOT4-202ENST00000356162 ALOX15P16050 662 aaPredicted RBP3.71□□□□□ -1.82
CNOT4-202ENST00000356162 MAPK1P28482 360 aa3.71□□□□□ -1.82
CNOT4-202ENST00000356162 ARRB2P32121 409 aa3.71□□□□□ -1.82
CNOT4-202ENST00000356162 STT3AP46977 705 aa3.71□□□□□ -1.82
CNOT4-202ENST00000356162 SLC1A6P48664 564 aa3.71□□□□□ -1.82
CNOT4-202ENST00000356162 CCL11P51671 97 aa3.71□□□□□ -1.82
CNOT4-202ENST00000356162 TAS2R50P59544 299 aa3.71□□□□□ -1.82
CNOT4-202ENST00000356162 RAE1P78406 368 aaKnown RBP3.71□□□□□ -1.82
CNOT4-202ENST00000356162 HMGCS1Q01581 520 aa3.71□□□□□ -1.82
CNOT4-202ENST00000356162 Q0VFX4 171 aa3.71□□□□□ -1.82
CNOT4-202ENST00000356162 STX4Q12846 297 aa3.71□□□□□ -1.82
CNOT4-202ENST00000356162 MFAP5Q13361 173 aa3.71□□□□□ -1.82
CNOT4-202ENST00000356162 SPRED3Q2MJR0 410 aa3.71□□□□□ -1.82
CNOT4-202ENST00000356162 SMU1Q2TAY7 513 aa3.71□□□□□ -1.82
CNOT4-202ENST00000356162 SOWAHCQ53LP3 525 aaPredicted RBP3.71□□□□□ -1.82
CNOT4-202ENST00000356162 C6orf163Q5TEZ5 329 aa3.71□□□□□ -1.82
CNOT4-202ENST00000356162 CES4AQ5XG92 561 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms