RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 FAM180AQ6UWF9 173 aa11.6□□□□□ -0.55
SMAD9-201ENST00000350148 PARM1Q6UWI2 310 aa11.6□□□□□ -0.55
SMAD9-201ENST00000350148 METTL4Q8N3J2 472 aa11.6□□□□□ -0.55
SMAD9-201ENST00000350148 NUP43Q8NFH3 380 aa11.6□□□□□ -0.55
SMAD9-201ENST00000350148 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.6□□□□□ -0.55
SMAD9-201ENST00000350148 LINC00615Q96LM1 132 aaPredicted RBP11.6□□□□□ -0.55
SMAD9-201ENST00000350148 EPYCQ99645 322 aa11.6□□□□□ -0.55
SMAD9-201ENST00000350148 NUAK2Q9H093 628 aa11.6□□□□□ -0.55
SMAD9-201ENST00000350148 MMP17Q9ULZ9 603 aa11.6□□□□□ -0.55
SMAD9-201ENST00000350148 WDR45Q9Y484 360 aa11.6□□□□□ -0.55
SMAD9-201ENST00000350148 GFYI3L273 518 aa11.6□□□□□ -0.55
SMAD9-201ENST00000350148 NME4O00746 187 aa11.6□□□□□ -0.55
SMAD9-201ENST00000350148 IGHA2P01877 340 aa11.6□□□□□ -0.55
SMAD9-201ENST00000350148 GGT5P36269 586 aa11.6□□□□□ -0.55
SMAD9-201ENST00000350148 FEN1P39748 380 aaKnown RBP11.6□□□□□ -0.55
SMAD9-201ENST00000350148 TSFMP43897 325 aaKnown RBP11.6□□□□□ -0.55
SMAD9-201ENST00000350148 CCR5P51681 352 aa11.6□□□□□ -0.55
SMAD9-201ENST00000350148 PGDP52209 483 aa11.6□□□□□ -0.55
SMAD9-201ENST00000350148 ATP12AP54707 1039 aa11.6□□□□□ -0.55
SMAD9-201ENST00000350148 CDH15P55291 814 aa11.6□□□□□ -0.55
SMAD9-201ENST00000350148 C6orf120Q7Z4R8 191 aa11.6□□□□□ -0.55
SMAD9-201ENST00000350148 ELMOD2Q8IZ81 293 aa11.6□□□□□ -0.55
SMAD9-201ENST00000350148 OR52J3Q8NH60 311 aa11.6□□□□□ -0.55
SMAD9-201ENST00000350148 RACGAP1Q9H0H5 632 aa11.6□□□□□ -0.55
SMAD9-201ENST00000350148 FAAHO00519 579 aa11.6□□□□□ -0.55
SMAD9-201ENST00000350148 IFI30P13284 250 aa11.6□□□□□ -0.55
SMAD9-201ENST00000350148 CKMT2P17540 419 aa11.6□□□□□ -0.55
SMAD9-201ENST00000350148 PTGES3Q15185 160 aaKnown RBP11.6□□□□□ -0.55
SMAD9-201ENST00000350148 GARNL3Q5VVW2 1013 aa11.6□□□□□ -0.55
SMAD9-201ENST00000350148 OAFQ86UD1 273 aa11.6□□□□□ -0.55
SMAD9-201ENST00000350148 ZNF440Q8IYI8 595 aa11.6□□□□□ -0.55
SMAD9-201ENST00000350148 S100PBPQ96BU1 408 aa11.6□□□□□ -0.55
SMAD9-201ENST00000350148 MND1Q9BWT6 205 aa11.6□□□□□ -0.55
SMAD9-201ENST00000350148 GORASP2Q9H8Y8 452 aa11.6□□□□□ -0.55
SMAD9-201ENST00000350148 PCDHGB7Q9Y5F8 929 aa11.6□□□□□ -0.55
SMAD9-201ENST00000350148 YKT6O15498 198 aa11.59□□□□□ -0.55
SMAD9-201ENST00000350148 DNAJB5O75953 348 aa11.59□□□□□ -0.55
SMAD9-201ENST00000350148 VNN2O95498 520 aa11.59□□□□□ -0.55
SMAD9-201ENST00000350148 IMPA1P29218 277 aa11.59□□□□□ -0.55
SMAD9-201ENST00000350148 PCGF2P35227 344 aa11.59□□□□□ -0.55
SMAD9-201ENST00000350148 SOX9P48436 509 aa11.59□□□□□ -0.55
SMAD9-201ENST00000350148 TARDBPQ13148 414 aaKnown RBP eCLIP11.59□□□□□ -0.55
SMAD9-201ENST00000350148 CADM2Q8N3J6 435 aa11.59□□□□□ -0.55
SMAD9-201ENST00000350148 ZHX1-C8orf76Q96EF9 292 aa11.59□□□□□ -0.55
SMAD9-201ENST00000350148 ALG14Q96F25 216 aa11.59□□□□□ -0.55
SMAD9-201ENST00000350148 MYADMQ96S97 322 aa11.59□□□□□ -0.55
SMAD9-201ENST00000350148 MYO18AQ92614 2054 aaKnown RBP11.59□□□□□ -0.55
SMAD9-201ENST00000350148 A0A0U1RQS6 177 aa11.59□□□□□ -0.55
SMAD9-201ENST00000350148 IQCCQ4KMZ1 466 aa11.59□□□□□ -0.55
SMAD9-201ENST00000350148 C12orf40Q86WS4 652 aa11.59□□□□□ -0.55
SMAD9-201ENST00000350148 PELI3Q8N2H9 469 aa11.59□□□□□ -0.55
SMAD9-201ENST00000350148 MFSD9Q8NBP5 474 aa11.59□□□□□ -0.55
SMAD9-201ENST00000350148 RNFT2Q96EX2 444 aa11.59□□□□□ -0.55
SMAD9-201ENST00000350148 DUSP23Q9BVJ7 150 aa11.59□□□□□ -0.55
SMAD9-201ENST00000350148 TAPBPLQ9BX59 468 aa11.59□□□□□ -0.55
SMAD9-201ENST00000350148 BRCA1P38398 1863 aaKnown RBP11.59□□□□□ -0.55
SMAD9-201ENST00000350148 ZBTB11O95625 1053 aaPredicted RBP11.59□□□□□ -0.55
SMAD9-201ENST00000350148 FADS2O95864 444 aaKnown RBP11.59□□□□□ -0.55
SMAD9-201ENST00000350148 RHCEP18577 417 aa11.59□□□□□ -0.55
SMAD9-201ENST00000350148 CD38P28907 300 aa11.59□□□□□ -0.55
SMAD9-201ENST00000350148 SMSP52788 366 aa11.59□□□□□ -0.55
SMAD9-201ENST00000350148 SERTAD2Q14140 314 aa11.59□□□□□ -0.55
SMAD9-201ENST00000350148 SWI5Q1ZZU3 235 aa11.59□□□□□ -0.55
SMAD9-201ENST00000350148 COLEC12Q5KU26 742 aa11.59□□□□□ -0.55
SMAD9-201ENST00000350148 POMGNT2Q8NAT1 580 aa11.59□□□□□ -0.55
SMAD9-201ENST00000350148 TANKQ92844 425 aa11.59□□□□□ -0.55
SMAD9-201ENST00000350148 C20orf27Q9GZN8 174 aa11.59□□□□□ -0.55
SMAD9-201ENST00000350148 ACSS1Q9NUB1 689 aaPredicted RBP11.59□□□□□ -0.55
SMAD9-201ENST00000350148 CMTM6Q9NX76 183 aa11.59□□□□□ -0.55
SMAD9-201ENST00000350148 NLGN3Q9NZ94 848 aa11.59□□□□□ -0.55
SMAD9-201ENST00000350148 SCDO00767 359 aa11.59□□□□□ -0.55
SMAD9-201ENST00000350148 PDHA2P29803 388 aa11.59□□□□□ -0.55
SMAD9-201ENST00000350148 PRDX3P30048 256 aaKnown RBP11.59□□□□□ -0.55
SMAD9-201ENST00000350148 REEP5Q00765 189 aa11.59□□□□□ -0.55
SMAD9-201ENST00000350148 LASP1Q14847 261 aaKnown RBP11.59□□□□□ -0.55
SMAD9-201ENST00000350148 SLCO4C1Q6ZQN7 724 aa11.59□□□□□ -0.55
SMAD9-201ENST00000350148 OR4C6Q8NH72 309 aa11.59□□□□□ -0.55
SMAD9-201ENST00000350148 GNPDA2Q8TDQ7 276 aa11.59□□□□□ -0.55
SMAD9-201ENST00000350148 ALPK1Q96QP1 1244 aa11.59□□□□□ -0.55
SMAD9-201ENST00000350148 GAL3ST4Q96RP7 486 aa11.59□□□□□ -0.55
SMAD9-201ENST00000350148 SLC30A3Q99726 388 aa11.59□□□□□ -0.55
SMAD9-201ENST00000350148 PIP5K1AQ99755 562 aa11.59□□□□□ -0.55
SMAD9-201ENST00000350148 STRADBQ9C0K7 418 aa11.59□□□□□ -0.55
SMAD9-201ENST00000350148 TOR3AQ9H497 397 aa11.59□□□□□ -0.55
SMAD9-201ENST00000350148 PNO1Q9NRX1 252 aaKnown RBP11.59□□□□□ -0.55
SMAD9-201ENST00000350148 MCIDASD6RGH6 385 aa11.58□□□□□ -0.55
SMAD9-201ENST00000350148 GBAP04062 536 aa11.58□□□□□ -0.55
SMAD9-201ENST00000350148 LAMP1P11279 417 aa11.58□□□□□ -0.55
SMAD9-201ENST00000350148 LSM3P62310 102 aaKnown RBP11.58□□□□□ -0.55
SMAD9-201ENST00000350148 CTBSQ01459 385 aa11.58□□□□□ -0.55
SMAD9-201ENST00000350148 LSAMPQ13449 338 aa11.58□□□□□ -0.55
SMAD9-201ENST00000350148 C9orf50Q5SZB4 431 aa11.58□□□□□ -0.55
SMAD9-201ENST00000350148 ANKRD26P1Q6NSI1 321 aa11.58□□□□□ -0.55
SMAD9-201ENST00000350148 RPL13AP3Q6NVV1 102 aa11.58□□□□□ -0.55
SMAD9-201ENST00000350148 TMEM265A0A087WTH1 108 aa11.58□□□□□ -0.56
SMAD9-201ENST00000350148 LOC100130705A0A1B0GUX0 176 aa11.58□□□□□ -0.56
SMAD9-201ENST00000350148 CHURC1-FNTBB4DL54 471 aa11.58□□□□□ -0.56
SMAD9-201ENST00000350148 XKRYO14609 159 aa11.58□□□□□ -0.56
SMAD9-201ENST00000350148 GNG2P59768 71 aa11.58□□□□□ -0.56
SMAD9-201ENST00000350148 ENPP2Q13822 863 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms