RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 EPHB3P54753 998 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 NOL9Q5SY16 702 aaKnown RBP3.62□□□□□ -1.83
SYNE2-202ENST00000344113 CHURC1Q8WUH1 139 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 HTR3CQ8WXA8 447 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 MYO19Q96H55 970 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 FTHL17Q9BXU8 183 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 RPS10P5Q9NQ39 176 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 TAS2R10Q9NYW0 307 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 KCNIP1Q9NZI2 227 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 ROBO3Q96MS0 1386 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 ZFYVE16Q7Z3T8 1539 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 P2RX6O15547 441 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 TEAD1P28347 426 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 RASGEF1BQ0VAM2 473 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 TAF9Q16594 264 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 ZDHHC17Q8IUH5 632 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 ARL14EPQ8N8R7 260 aaPredicted RBP3.62□□□□□ -1.83
SYNE2-202ENST00000344113 WNK1Q9H4A3 2382 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 RAB36O95755 333 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 MCAMP43121 646 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 ACOT2P49753 483 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 WNT4P56705 351 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 SNTB2Q13425 540 aaKnown RBP3.62□□□□□ -1.83
SYNE2-202ENST00000344113 SH2D5Q6ZV89 423 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 GLYATL2Q8WU03 294 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 C22orf15Q8WYQ4 148 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 S100A16Q96FQ6 103 aaKnown RBP3.62□□□□□ -1.83
SYNE2-202ENST00000344113 PANX3Q96QZ0 392 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 SEMA6AQ9H2E6 1030 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 NRP2O60462 931 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 DGKAP23743 735 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 HOXA9P31269 272 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 KCNH2Q12809 1159 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 MPPED2Q15777 294 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 XKR6Q5GH73 641 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 USP53Q70EK8 1073 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 TCTEX1D1Q8N7M0 179 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 SAT2Q96F10 170 aaPredicted RBP3.62□□□□□ -1.83
SYNE2-202ENST00000344113 NEU1Q99519 415 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 PKP2Q99959 881 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 TMEM181Q9P2C4 612 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 TGFB1P01137 390 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 SDC1P18827 310 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 NFYAP23511 347 aaPredicted RBP3.62□□□□□ -1.83
SYNE2-202ENST00000344113 SMSP52788 366 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 NDUFA6P56556 154 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 GPR50Q13585 617 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 LCN8Q6JVE9 175 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 CXorf57Q6NSI4 855 aaKnown RBP3.62□□□□□ -1.83
SYNE2-202ENST00000344113 ZC3H3Q8IXZ2 948 aaKnown RBP3.62□□□□□ -1.83
SYNE2-202ENST00000344113 FBXO15Q8NCQ5 510 aaPredicted RBP3.62□□□□□ -1.83
SYNE2-202ENST00000344113 DDX1Q92499 740 aaKnown RBP3.62□□□□□ -1.83
SYNE2-202ENST00000344113 AIG1Q9NVV5 245 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 RNF112Q9ULX5 631 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 DISP2A7MBM2 1401 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 NPHS1O60500 1241 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 MT-ND1P03886 318 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 BNIP3Q12983 259 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 RAB31Q13636 194 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 LTB4RQ15722 352 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 NIPAL3Q6P499 406 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 METTL23Q86XA0 190 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 SLC38A9Q8NBW4 561 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 SLC22A18Q96BI1 424 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 NSUN4Q96CB9 384 aaKnown RBP3.62□□□□□ -1.83
SYNE2-202ENST00000344113 DGAT2Q96PD7 388 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 SLC26A1Q9H2B4 701 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 SCML1Q9UN30 329 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 WTIPA6NIX2 430 aaPredicted RBP3.62□□□□□ -1.83
SYNE2-202ENST00000344113 TAAR5O14804 337 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 SNNO75324 88 aaPredicted RBP3.62□□□□□ -1.83
SYNE2-202ENST00000344113 ZNF682O95780 498 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 SLC6A2P23975 617 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 HOXA11P31270 313 aaPredicted RBP3.62□□□□□ -1.83
SYNE2-202ENST00000344113 GPR15P49685 360 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 COLGALT1Q8NBJ5 622 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 MARC2Q969Z3 335 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 EGLN2Q96KS0 407 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 ZPBPQ9BS86 351 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 AARSD1Q9BTE6 412 aaKnown RBP3.62□□□□□ -1.83
SYNE2-202ENST00000344113 SLC6A13Q9NSD5 602 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 FZD4Q9ULV1 537 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 USP6P35125 1406 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 LARGE1O95461 756 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 PEX2P28328 305 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 OR1G1P47890 313 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 RBBP4Q09028 425 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 TCEA2Q15560 299 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 SZRD1Q7Z422 152 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 NLRX1Q86UT6 975 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 SUMF1Q8NBK3 374 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 SLC30A7Q8NEW0 376 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 OR9I1Q8NGQ6 314 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 CASTOR1Q8WTX7 329 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 CRAMP1Q96RY5 1269 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 C1GALT1Q9NS00 363 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 A0A1W2PPK0 400 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 GOSR2O14653 212 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 BMP5P22003 454 aa3.62□□□□□ -1.83
SYNE2-202ENST00000344113 MSX1P28360 303 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms