RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 SLC28A3Q9HAS3 691 aa9.2□□□□□ -0.94
HOXA1-201ENST00000343060 PADI3Q9ULW8 664 aa9.2□□□□□ -0.94
HOXA1-201ENST00000343060 GSTK1Q9Y2Q3 226 aa9.2□□□□□ -0.94
HOXA1-201ENST00000343060 STON1Q9Y6Q2 735 aa9.2□□□□□ -0.94
HOXA1-201ENST00000343060 LOC102723532A0A0G2JNH3 316 aa9.2□□□□□ -0.94
HOXA1-201ENST00000343060 HPGDSO60760 199 aa9.2□□□□□ -0.94
HOXA1-201ENST00000343060 SCO1O75880 301 aa9.2□□□□□ -0.94
HOXA1-201ENST00000343060 IGFBP1P08833 259 aaPredicted RBP9.2□□□□□ -0.94
HOXA1-201ENST00000343060 ZNF8P17098 575 aaPredicted RBP9.2□□□□□ -0.94
HOXA1-201ENST00000343060 CD52P31358 61 aa9.2□□□□□ -0.94
HOXA1-201ENST00000343060 OPRD1P41143 372 aa9.2□□□□□ -0.94
HOXA1-201ENST00000343060 BDKRB1P46663 353 aa9.2□□□□□ -0.94
HOXA1-201ENST00000343060 SF1Q15637 639 aaKnown RBP9.2□□□□□ -0.94
HOXA1-201ENST00000343060 CYP27C1Q4G0S4 372 aa9.2□□□□□ -0.94
HOXA1-201ENST00000343060 SYT14P1Q58G82 188 aa9.2□□□□□ -0.94
HOXA1-201ENST00000343060 CLLU1Q5K131 121 aa9.2□□□□□ -0.94
HOXA1-201ENST00000343060 ATXN7L2Q5T6C5 722 aaPredicted RBP9.2□□□□□ -0.94
HOXA1-201ENST00000343060 GPR139Q6DWJ6 353 aa9.2□□□□□ -0.94
HOXA1-201ENST00000343060 KIAA1211LQ6NV74 962 aa9.2□□□□□ -0.94
HOXA1-201ENST00000343060 PGBD2Q6P3X8 592 aa9.2□□□□□ -0.94
HOXA1-201ENST00000343060 CD300LDQ6UXZ3 194 aa9.2□□□□□ -0.94
HOXA1-201ENST00000343060 SERINC5Q86VE9 423 aa9.2□□□□□ -0.94
HOXA1-201ENST00000343060 ZNF366Q8N895 744 aa9.2□□□□□ -0.94
HOXA1-201ENST00000343060 TCEANCQ8N8B7 351 aa9.2□□□□□ -0.94
HOXA1-201ENST00000343060 ZNF485Q8NCK3 441 aa9.2□□□□□ -0.94
HOXA1-201ENST00000343060 TOR1AIP2Q8NFQ8 470 aa9.2□□□□□ -0.94
HOXA1-201ENST00000343060 HGDQ93099 445 aa9.2□□□□□ -0.94
HOXA1-201ENST00000343060 SCMH1Q96GD3 660 aa9.2□□□□□ -0.94
HOXA1-201ENST00000343060 SORCS2Q96PQ0 1159 aa9.2□□□□□ -0.94
HOXA1-201ENST00000343060 UBL7Q96S82 380 aaPredicted RBP9.2□□□□□ -0.94
HOXA1-201ENST00000343060 MTERF1Q99551 399 aaKnown RBP9.2□□□□□ -0.94
HOXA1-201ENST00000343060 P2RY13Q9BPV8 354 aa9.2□□□□□ -0.94
HOXA1-201ENST00000343060 WRAP53Q9BUR4 548 aaKnown RBP9.2□□□□□ -0.94
HOXA1-201ENST00000343060 PRR14Q9BWN1 585 aa9.2□□□□□ -0.94
HOXA1-201ENST00000343060 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.2□□□□□ -0.94
HOXA1-201ENST00000343060 KCNN2Q9H2S1 579 aa9.2□□□□□ -0.94
HOXA1-201ENST00000343060 REEP4Q9H6H4 257 aa9.2□□□□□ -0.94
HOXA1-201ENST00000343060 AFF4Q9UHB7 1163 aaKnown RBP9.2□□□□□ -0.94
HOXA1-201ENST00000343060 POLHQ9Y253 713 aa9.2□□□□□ -0.94
HOXA1-201ENST00000343060 IRGMA1A4Y4 181 aa9.19□□□□□ -0.94
HOXA1-201ENST00000343060 BTN3A3O00478 584 aa9.19□□□□□ -0.94
HOXA1-201ENST00000343060 SYN3O14994 580 aa9.19□□□□□ -0.94
HOXA1-201ENST00000343060 SOX14O95416 240 aa9.19□□□□□ -0.94
HOXA1-201ENST00000343060 CLDN7O95471 211 aa9.19□□□□□ -0.94
HOXA1-201ENST00000343060 VNN2O95498 520 aa9.19□□□□□ -0.94
HOXA1-201ENST00000343060 C6orf47O95873 294 aa9.19□□□□□ -0.94
HOXA1-201ENST00000343060 SOD1P00441 154 aa9.19□□□□□ -0.94
HOXA1-201ENST00000343060 CCND3P30281 292 aaPredicted RBP9.19□□□□□ -0.94
HOXA1-201ENST00000343060 SRP54P61011 504 aaKnown RBP9.19□□□□□ -0.94
HOXA1-201ENST00000343060 FABP5Q01469 135 aa9.19□□□□□ -0.94
HOXA1-201ENST00000343060 DOC2AQ14183 400 aa9.19□□□□□ -0.94
HOXA1-201ENST00000343060 FCN2Q15485 313 aa9.19□□□□□ -0.94
HOXA1-201ENST00000343060 CRTC2Q53ET0 693 aaPredicted RBP9.19□□□□□ -0.94
HOXA1-201ENST00000343060 PXDC1Q5TGL8 231 aa9.19□□□□□ -0.94
HOXA1-201ENST00000343060 PRICKLE2Q7Z3G6 844 aa9.19□□□□□ -0.94
HOXA1-201ENST00000343060 BCDIN3DQ7Z5W3 292 aaKnown RBP9.19□□□□□ -0.94
HOXA1-201ENST00000343060 KIF18BQ86Y91 864 aa9.19□□□□□ -0.94
HOXA1-201ENST00000343060 ARIH2OSQ8N7S6 290 aa9.19□□□□□ -0.94
HOXA1-201ENST00000343060 ZNF431Q8TF32 576 aaPredicted RBP9.19□□□□□ -0.94
HOXA1-201ENST00000343060 UFD1Q92890 307 aa9.19□□□□□ -0.94
HOXA1-201ENST00000343060 TMEM203Q969S6 136 aa9.19□□□□□ -0.94
HOXA1-201ENST00000343060 PLD4Q96BZ4 506 aa9.19□□□□□ -0.94
HOXA1-201ENST00000343060 SENP5Q96HI0 755 aaPredicted RBP9.19□□□□□ -0.94
HOXA1-201ENST00000343060 ZNF582Q96NG8 517 aaPredicted RBP9.19□□□□□ -0.94
HOXA1-201ENST00000343060 GFM1Q96RP9 751 aaKnown RBP9.19□□□□□ -0.94
HOXA1-201ENST00000343060 AP5M1Q9H0R1 490 aa9.19□□□□□ -0.94
HOXA1-201ENST00000343060 PPIL3Q9H2H8 161 aaKnown RBP9.19□□□□□ -0.94
HOXA1-201ENST00000343060 CUEDC1Q9NWM3 386 aaPredicted RBP9.19□□□□□ -0.94
HOXA1-201ENST00000343060 RHCGQ9UBD6 479 aa9.19□□□□□ -0.94
HOXA1-201ENST00000343060 COMMD3Q9UBI1 195 aa9.19□□□□□ -0.94
HOXA1-201ENST00000343060 ACAD8Q9UKU7 415 aa9.19□□□□□ -0.94
HOXA1-201ENST00000343060 ING4Q9UNL4 249 aa9.19□□□□□ -0.94
HOXA1-201ENST00000343060 ITM2BQ9Y287 266 aa9.19□□□□□ -0.94
HOXA1-201ENST00000343060 PIPSLA2A3N6 862 aa9.19□□□□□ -0.94
HOXA1-201ENST00000343060 MTMR11A4FU01 709 aa9.19□□□□□ -0.94
HOXA1-201ENST00000343060 MGAT4DA6NG13 374 aa9.19□□□□□ -0.94
HOXA1-201ENST00000343060 OR6C75A6NL08 312 aa9.19□□□□□ -0.94
HOXA1-201ENST00000343060 ISM1B1AKI9 464 aa9.19□□□□□ -0.94
HOXA1-201ENST00000343060 PRKYO43930 277 aa9.19□□□□□ -0.94
HOXA1-201ENST00000343060 GPR37L1O60883 481 aa9.19□□□□□ -0.94
HOXA1-201ENST00000343060 SEMA7AO75326 666 aa9.19□□□□□ -0.94
HOXA1-201ENST00000343060 KLKB1P03952 638 aa9.19□□□□□ -0.94
HOXA1-201ENST00000343060 NR2F6P10588 404 aa9.19□□□□□ -0.94
HOXA1-201ENST00000343060 ZNF250P15622 560 aa9.19□□□□□ -0.94
HOXA1-201ENST00000343060 ENPP1P22413 925 aa9.19□□□□□ -0.94
HOXA1-201ENST00000343060 HNF1BP35680 557 aa9.19□□□□□ -0.94
HOXA1-201ENST00000343060 ETV3P41162 512 aa9.19□□□□□ -0.94
HOXA1-201ENST00000343060 SOX9P48436 509 aa9.19□□□□□ -0.94
HOXA1-201ENST00000343060 CLCNKAP51800 687 aa9.19□□□□□ -0.94
HOXA1-201ENST00000343060 DGKEP52429 567 aa9.19□□□□□ -0.94
HOXA1-201ENST00000343060 ATP12AP54707 1039 aa9.19□□□□□ -0.94
HOXA1-201ENST00000343060 ARPP19P56211 112 aa9.19□□□□□ -0.94
HOXA1-201ENST00000343060 IL18Q14116 193 aa9.19□□□□□ -0.94
HOXA1-201ENST00000343060 NFE2L1Q14494 772 aa9.19□□□□□ -0.94
HOXA1-201ENST00000343060 AANATQ16613 207 aa9.19□□□□□ -0.94
HOXA1-201ENST00000343060 XKR6Q5GH73 641 aa9.19□□□□□ -0.94
HOXA1-201ENST00000343060 TJAP1Q5JTD0 557 aa9.19□□□□□ -0.94
HOXA1-201ENST00000343060 PLEKHS1Q5SXH7 462 aa9.19□□□□□ -0.94
HOXA1-201ENST00000343060 LDLRAD1Q5T700 205 aa9.19□□□□□ -0.94
HOXA1-201ENST00000343060 GDF6Q6KF10 455 aaPredicted RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms