RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 CSNK1DP48730 415 aa11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 CCR8P51685 355 aa11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 BNC1Q01954 994 aa11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 LARS2Q15031 903 aaKnown RBP11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 AKIRIN2Q53H80 203 aa11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 PLAG1Q6DJT9 500 aa11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 SLC30A6Q6NXT4 461 aa11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 LINGO2Q7L985 606 aa11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 OR52N2Q8NGI0 321 aa11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 PRR14Q9BWN1 585 aa11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 OR51I1Q9H343 314 aa11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 COL4A5P29400 1685 aa11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 COL5A3P25940 1745 aaPredicted RBP11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 MEIOCA2RUB1 952 aa11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 TMEM202A6NGA9 273 aa11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 PLD2O14939 933 aa11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 MID1O15344 667 aa11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 SLC16A6O15403 523 aa11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 CYBAP13498 195 aa11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 ATF4P18848 351 aaPredicted RBP11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 MAP2K3P46734 347 aa11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 NTHL1P78549 312 aa11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 LRRC32Q14392 662 aa11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 ZNF613Q6PF04 617 aa11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 FRRS1Q6ZNA5 592 aa11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 OR4N5Q8IXE1 308 aa11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 KLHL36Q8N4N3 616 aa11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 RGMAQ96B86 450 aa11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 SLC6A16Q9GZN6 736 aa11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 RANGRFQ9HD47 186 aaPredicted RBP11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 ENAMQ9NRM1 1142 aa11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 HCFC1R1Q9NWW0 138 aa11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 MGAT4BQ9UQ53 548 aa11.86□□□□□ -0.51
SNRNP48-201ENST00000342415 A0A075B6Q4 140 aa11.85□□□□□ -0.51
SNRNP48-201ENST00000342415 ZSCAN5BA6NJL1 495 aa11.85□□□□□ -0.51
SNRNP48-201ENST00000342415 AKAP8O43823 692 aaKnown RBP11.85□□□□□ -0.51
SNRNP48-201ENST00000342415 TSPAN9O75954 239 aa11.85□□□□□ -0.51
SNRNP48-201ENST00000342415 CHMP24386 653 aa11.85□□□□□ -0.51
SNRNP48-201ENST00000342415 AGAP6Q5VW22 663 aa11.85□□□□□ -0.51
SNRNP48-201ENST00000342415 LRRC20Q8TCA0 184 aa11.85□□□□□ -0.51
SNRNP48-201ENST00000342415 SIPA1Q96FS4 1042 aa11.85□□□□□ -0.51
SNRNP48-201ENST00000342415 LMLNQ96KR4 655 aa11.85□□□□□ -0.51
SNRNP48-201ENST00000342415 AGAP4Q96P64 663 aa11.85□□□□□ -0.51
SNRNP48-201ENST00000342415 TRIB3Q96RU7 358 aa11.85□□□□□ -0.51
SNRNP48-201ENST00000342415 ZIC5Q96T25 663 aa11.85□□□□□ -0.51
SNRNP48-201ENST00000342415 FOCADQ5VW36 1801 aa11.85□□□□□ -0.51
SNRNP48-201ENST00000342415 KIF13BQ9NQT8 1826 aa11.85□□□□□ -0.51
SNRNP48-201ENST00000342415 SEC16AO15027 2179 aa11.85□□□□□ -0.51
SNRNP48-201ENST00000342415 FAM183AA6NL82 134 aa11.85□□□□□ -0.51
SNRNP48-201ENST00000342415 EEF1E1O43324 174 aaKnown RBP11.85□□□□□ -0.51
SNRNP48-201ENST00000342415 REM1O75628 298 aa11.85□□□□□ -0.51
SNRNP48-201ENST00000342415 SULT1C4O75897 302 aa11.85□□□□□ -0.51
SNRNP48-201ENST00000342415 HLA-DPB1P04440 258 aa11.85□□□□□ -0.51
SNRNP48-201ENST00000342415 CYP17A1P05093 508 aa11.85□□□□□ -0.51
SNRNP48-201ENST00000342415 PIK3CBP42338 1070 aa11.85□□□□□ -0.51
SNRNP48-201ENST00000342415 CAMK1Q14012 370 aa11.85□□□□□ -0.51
SNRNP48-201ENST00000342415 CTF1Q16619 201 aa11.85□□□□□ -0.51
SNRNP48-201ENST00000342415 AGAP7PQ5VUJ5 663 aa11.85□□□□□ -0.51
SNRNP48-201ENST00000342415 C17orf99Q6UX52 265 aa11.85□□□□□ -0.51
SNRNP48-201ENST00000342415 ELMOD2Q8IZ81 293 aa11.85□□□□□ -0.51
SNRNP48-201ENST00000342415 OR4C6Q8NH72 309 aa11.85□□□□□ -0.51
SNRNP48-201ENST00000342415 LMAN2LQ9H0V9 348 aa11.85□□□□□ -0.51
SNRNP48-201ENST00000342415 ABCG5Q9H222 651 aa11.85□□□□□ -0.51
SNRNP48-201ENST00000342415 HCN2Q9UL51 889 aa11.85□□□□□ -0.51
SNRNP48-201ENST00000342415 IRAK3Q9Y616 596 aa11.85□□□□□ -0.51
SNRNP48-201ENST00000342415 GRXCR2A6NFK2 248 aa11.85□□□□□ -0.51
SNRNP48-201ENST00000342415 RPP14O95059 124 aaKnown RBP11.85□□□□□ -0.51
SNRNP48-201ENST00000342415 RAB36O95755 333 aa11.85□□□□□ -0.51
SNRNP48-201ENST00000342415 CLEC2LP0C7M8 214 aa11.85□□□□□ -0.51
SNRNP48-201ENST00000342415 LAG3P18627 525 aa11.85□□□□□ -0.51
SNRNP48-201ENST00000342415 CASP3P42574 277 aa11.85□□□□□ -0.51
SNRNP48-201ENST00000342415 ACVR1Q04771 509 aa11.85□□□□□ -0.51
SNRNP48-201ENST00000342415 LGALS3BPQ08380 585 aa11.85□□□□□ -0.51
SNRNP48-201ENST00000342415 VEZF1Q14119 521 aa11.85□□□□□ -0.51
SNRNP48-201ENST00000342415 ZNF267Q14586 743 aaPredicted RBP11.85□□□□□ -0.51
SNRNP48-201ENST00000342415 SYT6Q5T7P8 510 aaPredicted RBP11.85□□□□□ -0.51
SNRNP48-201ENST00000342415 SLC27A4Q6P1M0 643 aa11.85□□□□□ -0.51
SNRNP48-201ENST00000342415 CHMP1BQ7LBR1 199 aa11.85□□□□□ -0.51
SNRNP48-201ENST00000342415 GRASPQ7Z6J2 395 aaPredicted RBP11.85□□□□□ -0.51
SNRNP48-201ENST00000342415 CCDC115Q96NT0 180 aa11.85□□□□□ -0.51
SNRNP48-201ENST00000342415 SGIP1Q9BQI5 828 aa11.85□□□□□ -0.51
SNRNP48-201ENST00000342415 QRSL1Q9H0R6 528 aaKnown RBP11.85□□□□□ -0.51
SNRNP48-201ENST00000342415 ANKHQ9HCJ1 492 aa11.85□□□□□ -0.51
SNRNP48-201ENST00000342415 CSNK1G3Q9Y6M4 447 aa11.85□□□□□ -0.51
SNRNP48-201ENST00000342415 TRBV4-1A0A0J9YWV2 114 aa11.84□□□□□ -0.51
SNRNP48-201ENST00000342415 C12orf71A8MTZ7 269 aa11.84□□□□□ -0.51
SNRNP48-201ENST00000342415 CSNK2A2P19784 350 aaPredicted RBP11.84□□□□□ -0.51
SNRNP48-201ENST00000342415 ARL4DP49703 201 aa11.84□□□□□ -0.51
SNRNP48-201ENST00000342415 PNLIPRP1P54315 467 aa11.84□□□□□ -0.51
SNRNP48-201ENST00000342415 CXCR4P61073 352 aa11.84□□□□□ -0.51
SNRNP48-201ENST00000342415 RACK1P63244 317 aaKnown RBP11.84□□□□□ -0.51
SNRNP48-201ENST00000342415 BTN3A2P78410 334 aa11.84□□□□□ -0.51
SNRNP48-201ENST00000342415 FADDQ13158 208 aa11.84□□□□□ -0.51
SNRNP48-201ENST00000342415 MAB21L1Q13394 359 aa11.84□□□□□ -0.51
SNRNP48-201ENST00000342415 PRPF38BQ5VTL8 546 aaKnown RBP11.84□□□□□ -0.51
SNRNP48-201ENST00000342415 TRIM46Q7Z4K8 759 aa11.84□□□□□ -0.51
SNRNP48-201ENST00000342415 PEX5LQ8IYB4 626 aa11.84□□□□□ -0.51
SNRNP48-201ENST00000342415 OR51L1Q8NGJ5 315 aa11.84□□□□□ -0.51
SNRNP48-201ENST00000342415 OR5AR1Q8NGP9 310 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms