RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 PLD3Q8IV08 490 aa9.93□□□□□ -0.82
ATXN3-201ENST00000340660 KCTD4Q8WVF5 259 aa9.93□□□□□ -0.82
ATXN3-201ENST00000340660 EIF2B3Q9NR50 452 aaKnown RBP9.93□□□□□ -0.82
ATXN3-201ENST00000340660 DDX28Q9NUL7 540 aaKnown RBP9.93□□□□□ -0.82
ATXN3-201ENST00000340660 UBP1Q9NZI7 540 aa9.93□□□□□ -0.82
ATXN3-201ENST00000340660 HEY2Q9UBP5 337 aa9.93□□□□□ -0.82
ATXN3-201ENST00000340660 HPSEQ9Y251 543 aa9.93□□□□□ -0.82
ATXN3-201ENST00000340660 SPEF1Q9Y4P9 236 aa9.93□□□□□ -0.82
ATXN3-201ENST00000340660 PRSS21Q9Y6M0 314 aa9.93□□□□□ -0.82
ATXN3-201ENST00000340660 H7C417 338 aa9.92□□□□□ -0.82
ATXN3-201ENST00000340660 STX7O15400 261 aaKnown RBP9.92□□□□□ -0.82
ATXN3-201ENST00000340660 RAMP1O60894 148 aa9.92□□□□□ -0.82
ATXN3-201ENST00000340660 PPP1R3DO95685 299 aa9.92□□□□□ -0.82
ATXN3-201ENST00000340660 CALB1P05937 261 aa9.92□□□□□ -0.82
ATXN3-201ENST00000340660 PCMT1P22061 227 aa9.92□□□□□ -0.82
ATXN3-201ENST00000340660 CMPK1P30085 196 aa9.92□□□□□ -0.82
ATXN3-201ENST00000340660 NSFP46459 744 aaKnown RBP9.92□□□□□ -0.82
ATXN3-201ENST00000340660 CDR2Q01850 454 aa9.92□□□□□ -0.82
ATXN3-201ENST00000340660 TEKQ02763 1124 aa9.92□□□□□ -0.82
ATXN3-201ENST00000340660 CYP1B1Q16678 543 aa9.92□□□□□ -0.82
ATXN3-201ENST00000340660 ZSWIM7Q19AV6 140 aa9.92□□□□□ -0.82
ATXN3-201ENST00000340660 CCSMST1Q4G0I0 132 aa9.92□□□□□ -0.82
ATXN3-201ENST00000340660 SIRPB2Q5JXA9 342 aa9.92□□□□□ -0.82
ATXN3-201ENST00000340660 ZNF658Q5TYW1 1059 aaPredicted RBP9.92□□□□□ -0.82
ATXN3-201ENST00000340660 ASPHD2Q6ICH7 369 aa9.92□□□□□ -0.82
ATXN3-201ENST00000340660 DCUN1D2Q6PH85 259 aa9.92□□□□□ -0.82
ATXN3-201ENST00000340660 SBSNQ6UWP8 590 aa9.92□□□□□ -0.82
ATXN3-201ENST00000340660 VN1R4Q7Z5H5 301 aa9.92□□□□□ -0.82
ATXN3-201ENST00000340660 PHF13Q86YI8 300 aaPredicted RBP9.92□□□□□ -0.82
ATXN3-201ENST00000340660 GRAMD2AQ8IUY3 354 aa9.92□□□□□ -0.82
ATXN3-201ENST00000340660 VRK3Q8IV63 474 aa9.92□□□□□ -0.82
ATXN3-201ENST00000340660 PPHLN1Q8NEY8 458 aaKnown RBP9.92□□□□□ -0.82
ATXN3-201ENST00000340660 CFAP61Q8NHU2 1237 aa9.92□□□□□ -0.82
ATXN3-201ENST00000340660 HMGCLL1Q8TB92 370 aa9.92□□□□□ -0.82
ATXN3-201ENST00000340660 PAQR8Q8TEZ7 354 aa9.92□□□□□ -0.82
ATXN3-201ENST00000340660 HEXDCQ8WVB3 486 aa9.92□□□□□ -0.82
ATXN3-201ENST00000340660 ULK4Q96C45 1275 aa9.92□□□□□ -0.82
ATXN3-201ENST00000340660 ZNF845Q96IR2 970 aaPredicted RBP9.92□□□□□ -0.82
ATXN3-201ENST00000340660 CITED1Q99966 193 aa9.92□□□□□ -0.82
ATXN3-201ENST00000340660 BPESC1Q9GZL8 116 aa9.92□□□□□ -0.82
ATXN3-201ENST00000340660 ACTR6Q9GZN1 396 aa9.92□□□□□ -0.82
ATXN3-201ENST00000340660 MYO1AQ9UBC5 1043 aa9.92□□□□□ -0.82
ATXN3-201ENST00000340660 NAALAD2Q9Y3Q0 740 aa9.92□□□□□ -0.82
ATXN3-201ENST00000340660 ARL5AQ9Y689 179 aa9.92□□□□□ -0.82
ATXN3-201ENST00000340660 PLCE1Q9P212 2302 aa9.91□□□□□ -0.82
ATXN3-201ENST00000340660 UBR4Q5T4S7 5183 aa9.91□□□□□ -0.82
ATXN3-201ENST00000340660 HAT1O14929 419 aa9.91□□□□□ -0.82
ATXN3-201ENST00000340660 TRIM3O75382 744 aaPredicted RBP9.91□□□□□ -0.82
ATXN3-201ENST00000340660 CYP1A2P05177 515 aa9.91□□□□□ -0.82
ATXN3-201ENST00000340660 FESP07332 822 aa9.91□□□□□ -0.82
ATXN3-201ENST00000340660 TMEM253P0C7T8 217 aa9.91□□□□□ -0.82
ATXN3-201ENST00000340660 EZRP15311 586 aaKnown RBP9.91□□□□□ -0.82
ATXN3-201ENST00000340660 TCF4P15884 667 aa9.91□□□□□ -0.82
ATXN3-201ENST00000340660 CHMP24386 653 aa9.91□□□□□ -0.82
ATXN3-201ENST00000340660 PTPN3P26045 913 aa9.91□□□□□ -0.82
ATXN3-201ENST00000340660 PNLIPRP1P54315 467 aa9.91□□□□□ -0.82
ATXN3-201ENST00000340660 CSE1LP55060 971 aaKnown RBP9.91□□□□□ -0.82
ATXN3-201ENST00000340660 PLOD1Q02809 727 aaPredicted RBP9.91□□□□□ -0.82
ATXN3-201ENST00000340660 BSPH1Q075Z2 132 aa9.91□□□□□ -0.82
ATXN3-201ENST00000340660 PKP1Q13835 747 aa9.91□□□□□ -0.82
ATXN3-201ENST00000340660 TERF2Q15554 542 aa9.91□□□□□ -0.82
ATXN3-201ENST00000340660 NCBP2-AS2Q69YL0 99 aa9.91□□□□□ -0.82
ATXN3-201ENST00000340660 SHQ1Q6PI26 577 aaKnown RBP9.91□□□□□ -0.82
ATXN3-201ENST00000340660 RCOR2Q8IZ40 523 aa9.91□□□□□ -0.82
ATXN3-201ENST00000340660 LILRA2Q8N149 483 aa9.91□□□□□ -0.82
ATXN3-201ENST00000340660 SLC25A41Q8N5S1 370 aa9.91□□□□□ -0.82
ATXN3-201ENST00000340660 SYT3Q9BQG1 590 aa9.91□□□□□ -0.82
ATXN3-201ENST00000340660 KRTAP4-9Q9BYQ8 210 aa9.91□□□□□ -0.82
ATXN3-201ENST00000340660 ANKHQ9HCJ1 492 aa9.91□□□□□ -0.82
ATXN3-201ENST00000340660 MRPS30Q9NP92 439 aaKnown RBP9.91□□□□□ -0.82
ATXN3-201ENST00000340660 HOMER3Q9NSC5 361 aa9.91□□□□□ -0.82
ATXN3-201ENST00000340660 CBLN4Q9NTU7 201 aa9.91□□□□□ -0.82
ATXN3-201ENST00000340660 HACD3Q9P035 362 aa9.91□□□□□ -0.82
ATXN3-201ENST00000340660 NKX1-2Q9UD57 310 aaPredicted RBP9.91□□□□□ -0.82
ATXN3-201ENST00000340660 TTC7AQ9ULT0 858 aaPredicted RBP9.91□□□□□ -0.82
ATXN3-201ENST00000340660 LOC285095A0A1B0GVY8 99 aa9.9□□□□□ -0.82
ATXN3-201ENST00000340660 SHISA9B4DS77 424 aa9.9□□□□□ -0.82
ATXN3-201ENST00000340660 NPIPB6E9PJ23 425 aa9.9□□□□□ -0.82
ATXN3-201ENST00000340660 C3orf84H3BNL1 204 aa9.9□□□□□ -0.82
ATXN3-201ENST00000340660 ETV2O00321 342 aaPredicted RBP9.9□□□□□ -0.82
ATXN3-201ENST00000340660 TIMM23O14925 209 aa9.9□□□□□ -0.82
ATXN3-201ENST00000340660 GPC4O75487 556 aa9.9□□□□□ -0.82
ATXN3-201ENST00000340660 PRSS56P0CW18 603 aa9.9□□□□□ -0.82
ATXN3-201ENST00000340660 DESP17661 470 aa9.9□□□□□ -0.82
ATXN3-201ENST00000340660 JAK1P23458 1154 aa9.9□□□□□ -0.82
ATXN3-201ENST00000340660 APEX1P27695 318 aaKnown RBP9.9□□□□□ -0.82
ATXN3-201ENST00000340660 PPP2R1BP30154 601 aa9.9□□□□□ -0.82
ATXN3-201ENST00000340660 EIF3BP55884 814 aaKnown RBP9.9□□□□□ -0.82
ATXN3-201ENST00000340660 OLR1P78380 273 aa9.9□□□□□ -0.82
ATXN3-201ENST00000340660 ZNF791Q3KP31 576 aaPredicted RBP9.9□□□□□ -0.82
ATXN3-201ENST00000340660 SYTL3Q4VX76 610 aa9.9□□□□□ -0.82
ATXN3-201ENST00000340660 HECTD2Q5U5R9 776 aa9.9□□□□□ -0.82
ATXN3-201ENST00000340660 OPN5Q6U736 354 aa9.9□□□□□ -0.82
ATXN3-201ENST00000340660 ZNF677Q86XU0 584 aa9.9□□□□□ -0.82
ATXN3-201ENST00000340660 OR4K2Q8NGD2 314 aa9.9□□□□□ -0.82
ATXN3-201ENST00000340660 FAM110DQ8TAY7 271 aaPredicted RBP9.9□□□□□ -0.82
ATXN3-201ENST00000340660 ZBTB8AQ96BR9 441 aa9.9□□□□□ -0.82
ATXN3-201ENST00000340660 CTHRC1Q96CG8 243 aa9.9□□□□□ -0.82
ATXN3-201ENST00000340660 DUX5Q96PT3 197 aa9.9□□□□□ -0.82
ATXN3-201ENST00000340660 TACO1Q9BSH4 297 aaKnown RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms