RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 CLEC4AQ9UMR7 237 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 FLVCR2Q9UPI3 526 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 WASF3Q9UPY6 502 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 A0A0C4DFX4 3053 aa9.21□□□□□ -0.93
PTCHD4-201ENST00000339488 GABRR3A8MPY1 467 aa9.21□□□□□ -0.93
PTCHD4-201ENST00000339488 AP2A1O95782 977 aa9.21□□□□□ -0.93
PTCHD4-201ENST00000339488 HLA-DQB1P01920 261 aa9.21□□□□□ -0.93
PTCHD4-201ENST00000339488 MBP02144 154 aa9.21□□□□□ -0.93
PTCHD4-201ENST00000339488 NQO2P16083 231 aa9.21□□□□□ -0.93
PTCHD4-201ENST00000339488 CTPS1P17812 591 aa9.21□□□□□ -0.93
PTCHD4-201ENST00000339488 ADCYAP1P18509 176 aa9.21□□□□□ -0.93
PTCHD4-201ENST00000339488 CHRNA4P43681 627 aa9.21□□□□□ -0.93
PTCHD4-201ENST00000339488 C21orf58P58505 322 aa9.21□□□□□ -0.93
PTCHD4-201ENST00000339488 PDZK1IP1Q13113 114 aa9.21□□□□□ -0.93
PTCHD4-201ENST00000339488 NCMAPQ5T1S8 102 aa9.21□□□□□ -0.93
PTCHD4-201ENST00000339488 EFCAB12Q6NXP0 572 aa9.21□□□□□ -0.93
PTCHD4-201ENST00000339488 SPATA22Q8NHS9 363 aa9.21□□□□□ -0.93
PTCHD4-201ENST00000339488 THAP6Q8TBB0 222 aa9.21□□□□□ -0.93
PTCHD4-201ENST00000339488 KCNJ9Q92806 393 aa9.21□□□□□ -0.93
PTCHD4-201ENST00000339488 RELTQ969Z4 430 aa9.21□□□□□ -0.93
PTCHD4-201ENST00000339488 TPD52L3Q96J77 140 aa9.21□□□□□ -0.93
PTCHD4-201ENST00000339488 HRASLS5Q96KN8 279 aa9.21□□□□□ -0.93
PTCHD4-201ENST00000339488 FCRL1Q96LA6 429 aa9.21□□□□□ -0.93
PTCHD4-201ENST00000339488 BBS4Q96RK4 519 aa9.21□□□□□ -0.93
PTCHD4-201ENST00000339488 PRR14Q9BWN1 585 aa9.21□□□□□ -0.93
PTCHD4-201ENST00000339488 POLR2J2Q9GZM3 115 aaKnown RBP9.21□□□□□ -0.93
PTCHD4-201ENST00000339488 MCOLN1Q9GZU1 580 aa9.21□□□□□ -0.93
PTCHD4-201ENST00000339488 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.21□□□□□ -0.936e-23■□□□□ 10.4
PTCHD4-201ENST00000339488 ENKD1Q9H0I2 346 aa9.21□□□□□ -0.93
PTCHD4-201ENST00000339488 SIK2Q9H0K1 926 aa9.21□□□□□ -0.93
PTCHD4-201ENST00000339488 LINC00597Q9H2U6 94 aa9.21□□□□□ -0.93
PTCHD4-201ENST00000339488 EXOSC3Q9NQT5 275 aaKnown RBP9.21□□□□□ -0.93
PTCHD4-201ENST00000339488 CA10Q9NS85 328 aa9.21□□□□□ -0.93
PTCHD4-201ENST00000339488 FLRT1Q9NZU1 646 aa9.21□□□□□ -0.93
PTCHD4-201ENST00000339488 CBY1Q9Y3M2 126 aa9.21□□□□□ -0.93
PTCHD4-201ENST00000339488 HYKKA2RU49 373 aa9.21□□□□□ -0.94
PTCHD4-201ENST00000339488 C7orf66A4D0T2 115 aa9.21□□□□□ -0.94
PTCHD4-201ENST00000339488 HAS3O00219 553 aa9.21□□□□□ -0.94
PTCHD4-201ENST00000339488 ADAMDEC1O15204 470 aa9.21□□□□□ -0.94
PTCHD4-201ENST00000339488 PEX10O60683 326 aa9.21□□□□□ -0.94
PTCHD4-201ENST00000339488 GGT2P36268 569 aa9.21□□□□□ -0.94
PTCHD4-201ENST00000339488 FEN1P39748 380 aaKnown RBP9.21□□□□□ -0.94
PTCHD4-201ENST00000339488 STX4Q12846 297 aa9.21□□□□□ -0.94
PTCHD4-201ENST00000339488 SLC14A1Q13336 389 aa9.21□□□□□ -0.94
PTCHD4-201ENST00000339488 DCAF8Q5TAQ9 597 aa9.21□□□□□ -0.94
PTCHD4-201ENST00000339488 CD276Q5ZPR3 534 aa9.21□□□□□ -0.94
PTCHD4-201ENST00000339488 OR5M10Q6IEU7 315 aa9.21□□□□□ -0.94
PTCHD4-201ENST00000339488 NHLRC1Q6VVB1 395 aa9.21□□□□□ -0.94
PTCHD4-201ENST00000339488 ZNF852Q6ZMS4 543 aa9.21□□□□□ -0.94
PTCHD4-201ENST00000339488 Q6ZTK2 550 aa9.21□□□□□ -0.94
PTCHD4-201ENST00000339488 CCDC116Q8IYX3 515 aa9.21□□□□□ -0.94
PTCHD4-201ENST00000339488 ZNF383Q8NA42 475 aa9.21□□□□□ -0.94
PTCHD4-201ENST00000339488 TMEM174Q8WUU8 243 aa9.21□□□□□ -0.94
PTCHD4-201ENST00000339488 NEU1Q99519 415 aa9.21□□□□□ -0.94
PTCHD4-201ENST00000339488 RAD9AQ99638 391 aa9.21□□□□□ -0.94
PTCHD4-201ENST00000339488 KCNJ15Q99712 375 aa9.21□□□□□ -0.94
PTCHD4-201ENST00000339488 ARL6Q9H0F7 186 aa9.21□□□□□ -0.94
PTCHD4-201ENST00000339488 CHRDQ9H2X0 955 aa9.21□□□□□ -0.94
PTCHD4-201ENST00000339488 EIF2B3Q9NR50 452 aaKnown RBP9.21□□□□□ -0.94
PTCHD4-201ENST00000339488 RNF146Q9NTX7 359 aa9.21□□□□□ -0.94
PTCHD4-201ENST00000339488 NTMQ9P121 344 aa9.21□□□□□ -0.94
PTCHD4-201ENST00000339488 TNRC6CQ9HCJ0 1690 aaKnown RBP9.21□□□□□ -0.94
PTCHD4-201ENST00000339488 ZNF638Q14966 1978 aaKnown RBP9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 ARHGEF33A8MVX0 844 aa9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 B4GALT3O60512 393 aa9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 PIGRP01833 764 aa9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 TFP02787 698 aa9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 HLA-DPA1P20036 260 aa9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 FPR1P21462 350 aa9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 PBLDP30039 288 aaPredicted RBP9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 DNAJA1P31689 397 aaKnown RBP9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 AKR1C3P42330 323 aa9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 BDKRB1P46663 353 aa9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 AGTR2P50052 363 aa9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 HTR6P50406 440 aa9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 ACLYP53396 1101 aa9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 CDKN2DP55273 166 aa9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 CLDN8P56748 225 aa9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 RPS25P62851 125 aaKnown RBP9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 PWP1Q13610 501 aa9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 SSPNQ14714 243 aa9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 FAM174BQ3ZCQ3 159 aa9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 INO80DQ53TQ3 878 aaPredicted RBP9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 C3orf33Q6P1S2 294 aa9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 SYNPOQ8N3V7 929 aa9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 MCPH1Q8NEM0 835 aa9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 OR10K1Q8NGX5 313 aa9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 DTD1Q8TEA8 209 aa9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 SCARB1Q8WTV0 552 aa9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 S100PBPQ96BU1 408 aa9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 TMEM209Q96SK2 561 aa9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 FEVQ99581 238 aa9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 NIPSNAP1Q9BPW8 284 aa9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 NTPCRQ9BSD7 190 aaKnown RBP9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 ST6GALNAC4Q9H4F1 302 aa9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 SEBOXQ9HB31 216 aaPredicted RBP9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 RNF19AQ9NV58 838 aa9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 C2orf42Q9NWW7 574 aa9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 DNAJC27Q9NZQ0 273 aa9.2□□□□□ -0.94
PTCHD4-201ENST00000339488 MPP6Q9NZW5 540 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms