RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 REEP3Q6NUK4 255 aa15.48■□□□□ 0.07
LITAF-201ENST00000339430 TAGAPQ8N103 731 aa15.48■□□□□ 0.07
LITAF-201ENST00000339430 STX19Q8N4C7 294 aa15.48■□□□□ 0.07
LITAF-201ENST00000339430 OR6Q1Q8NGQ2 317 aa15.48■□□□□ 0.07
LITAF-201ENST00000339430 MAFAQ8NHW3 353 aaPredicted RBP15.48■□□□□ 0.07
LITAF-201ENST00000339430 SLC38A5Q8WUX1 472 aa15.48■□□□□ 0.07
LITAF-201ENST00000339430 DCSTAMPQ9H295 470 aa15.48■□□□□ 0.07
LITAF-201ENST00000339430 MS4A12Q9NXJ0 267 aa15.48■□□□□ 0.07
LITAF-201ENST00000339430 AHSPQ9NZD4 102 aa15.48■□□□□ 0.07
LITAF-201ENST00000339430 HCN4Q9Y3Q4 1203 aa15.48■□□□□ 0.07
LITAF-201ENST00000339430 CLDN24A6NM45 220 aa15.48■□□□□ 0.07
LITAF-201ENST00000339430 LATO43561 262 aa15.48■□□□□ 0.07
LITAF-201ENST00000339430 IFNW1P05000 195 aa15.48■□□□□ 0.07
LITAF-201ENST00000339430 SERPIND1P05546 499 aa15.48■□□□□ 0.07
LITAF-201ENST00000339430 GABRB1P18505 474 aa15.48■□□□□ 0.07
LITAF-201ENST00000339430 BSGP35613 385 aa15.48■□□□□ 0.07
LITAF-201ENST00000339430 CRISP3P54108 245 aa15.48■□□□□ 0.07
LITAF-201ENST00000339430 ELOAQ14241 798 aaKnown RBP15.48■□□□□ 0.07
LITAF-201ENST00000339430 SOWAHCQ53LP3 525 aaPredicted RBP15.48■□□□□ 0.07
LITAF-201ENST00000339430 PNCKQ6P2M8 343 aa15.48■□□□□ 0.07
LITAF-201ENST00000339430 TMEM92Q6UXU6 159 aa15.48■□□□□ 0.07
LITAF-201ENST00000339430 SZRD1Q7Z422 152 aa15.48■□□□□ 0.07
LITAF-201ENST00000339430 LRRTM4Q86VH4 590 aa15.48■□□□□ 0.07
LITAF-201ENST00000339430 MFSD4AQ8N468 514 aa15.48■□□□□ 0.07
LITAF-201ENST00000339430 S100ZQ8WXG8 99 aa15.48■□□□□ 0.07
LITAF-201ENST00000339430 COX14Q96I36 57 aa15.48■□□□□ 0.07
LITAF-201ENST00000339430 AIF1LQ9BQI0 150 aa15.48■□□□□ 0.07
LITAF-201ENST00000339430 RSPO3Q9BXY4 272 aaPredicted RBP15.48■□□□□ 0.07
LITAF-201ENST00000339430 MS4A8Q9BY19 250 aa15.48■□□□□ 0.07
LITAF-201ENST00000339430 NMNAT1Q9HAN9 279 aaPredicted RBP15.48■□□□□ 0.07
LITAF-201ENST00000339430 PLCXD1Q9NUJ7 323 aa15.48■□□□□ 0.07
LITAF-201ENST00000339430 PDPK1O15530 556 aa15.47■□□□□ 0.07
LITAF-201ENST00000339430 B4GALT2O60909 372 aa15.47■□□□□ 0.07
LITAF-201ENST00000339430 PTHP01270 115 aa15.47■□□□□ 0.07
LITAF-201ENST00000339430 HSMCR30P0CW71 290 aa15.47■□□□□ 0.07
LITAF-201ENST00000339430 GRK5P34947 590 aa15.47■□□□□ 0.07
LITAF-201ENST00000339430 LIMS1P48059 325 aa15.47■□□□□ 0.07
LITAF-201ENST00000339430 PXNP49023 591 aaPredicted RBP15.47■□□□□ 0.07
LITAF-201ENST00000339430 RAB15P59190 212 aa15.47■□□□□ 0.07
LITAF-201ENST00000339430 CDK3Q00526 305 aa15.47■□□□□ 0.07
LITAF-201ENST00000339430 ST3GAL4Q11206 333 aa15.47■□□□□ 0.07
LITAF-201ENST00000339430 SPDYE7PQ495Y7 208 aa15.47■□□□□ 0.07
LITAF-201ENST00000339430 KLHL17Q6TDP4 642 aa15.47■□□□□ 0.07
LITAF-201ENST00000339430 Q6ZS52 159 aa15.47■□□□□ 0.07
LITAF-201ENST00000339430 AMER3Q8N944 861 aa15.47■□□□□ 0.07
LITAF-201ENST00000339430 OR5K2Q8NHB8 316 aa15.47■□□□□ 0.07
LITAF-201ENST00000339430 VANGL1Q8TAA9 524 aaPredicted RBP15.47■□□□□ 0.07
LITAF-201ENST00000339430 ZNF675Q8TD23 568 aa15.47■□□□□ 0.07
LITAF-201ENST00000339430 TMEM19Q96HH6 336 aa15.47■□□□□ 0.07
LITAF-201ENST00000339430 ROGDIQ9GZN7 287 aa15.47■□□□□ 0.07
LITAF-201ENST00000339430 RNF167Q9H6Y7 350 aa15.47■□□□□ 0.07
LITAF-201ENST00000339430 FBRSQ9HAH7 460 aa15.47■□□□□ 0.07
LITAF-201ENST00000339430 TRNAU1APQ9NX07 287 aaKnown RBP15.47■□□□□ 0.07
LITAF-201ENST00000339430 TEX10Q9NXF1 929 aaPredicted RBP15.47■□□□□ 0.07
LITAF-201ENST00000339430 SPATA7Q9P0W8 599 aa15.47■□□□□ 0.07
LITAF-201ENST00000339430 OSGIN1Q9UJX0 560 aa15.47■□□□□ 0.07
LITAF-201ENST00000339430 ICKQ9UPZ9 632 aa15.47■□□□□ 0.07
LITAF-201ENST00000339430 OR1A2Q9Y585 309 aa15.47■□□□□ 0.07
LITAF-201ENST00000339430 TRBV4-1A0A0J9YWV2 114 aa15.47■□□□□ 0.07
LITAF-201ENST00000339430 LOC100506127A0A0U1RQW1 187 aa15.47■□□□□ 0.07
LITAF-201ENST00000339430 MAN2B1O00754 1011 aa15.47■□□□□ 0.07
LITAF-201ENST00000339430 FFAR1O14842 300 aa15.47■□□□□ 0.07
LITAF-201ENST00000339430 PPM1DO15297 605 aa15.47■□□□□ 0.07
LITAF-201ENST00000339430 ADORA3P0DMS8 318 aa15.47■□□□□ 0.07
LITAF-201ENST00000339430 RHCEP18577 417 aa15.47■□□□□ 0.07
LITAF-201ENST00000339430 CBLP22681 906 aa15.47■□□□□ 0.07
LITAF-201ENST00000339430 CLCNKAP51800 687 aa15.47■□□□□ 0.07
LITAF-201ENST00000339430 TBCEQ15813 527 aaPredicted RBP15.47■□□□□ 0.07
LITAF-201ENST00000339430 EOGTQ5NDL2 527 aa15.47■□□□□ 0.07
LITAF-201ENST00000339430 ADCK2Q7Z695 626 aa15.47■□□□□ 0.07
LITAF-201ENST00000339430 DEPDC4Q8N2C3 294 aa15.47■□□□□ 0.07
LITAF-201ENST00000339430 FLCNQ8NFG4 579 aa15.47■□□□□ 0.07
LITAF-201ENST00000339430 B3GNT7Q8NFL0 401 aa15.47■□□□□ 0.07
LITAF-201ENST00000339430 MCFD2Q8NI22 146 aa15.47■□□□□ 0.07
LITAF-201ENST00000339430 SIPA1Q96FS4 1042 aa15.47■□□□□ 0.07
LITAF-201ENST00000339430 LHX9Q9NQ69 397 aa15.47■□□□□ 0.07
LITAF-201ENST00000339430 FBXO8Q9NRD0 319 aa15.47■□□□□ 0.07
LITAF-201ENST00000339430 FKBP14Q9NWM8 211 aa15.47■□□□□ 0.07
LITAF-201ENST00000339430 PRR23AA6NEV1 266 aa15.46■□□□□ 0.07
LITAF-201ENST00000339430 KPNA4O00629 521 aaPredicted RBP15.46■□□□□ 0.07
LITAF-201ENST00000339430 OR1F1O43749 312 aa15.46■□□□□ 0.07
LITAF-201ENST00000339430 PTGER1P34995 402 aa15.46■□□□□ 0.07
LITAF-201ENST00000339430 GRK3P35626 688 aa15.46■□□□□ 0.07
LITAF-201ENST00000339430 ZP2Q05996 745 aa15.46■□□□□ 0.07
LITAF-201ENST00000339430 TP53BP2Q13625 1128 aa15.46■□□□□ 0.07
LITAF-201ENST00000339430 MAPK11Q15759 364 aa15.46■□□□□ 0.07
LITAF-201ENST00000339430 SAXO2Q658L1 398 aa15.46■□□□□ 0.07
LITAF-201ENST00000339430 NIPAL1Q6NVV3 410 aa15.46■□□□□ 0.07
LITAF-201ENST00000339430 C6orf120Q7Z4R8 191 aa15.46■□□□□ 0.07
LITAF-201ENST00000339430 RBM45Q8IUH3 476 aaKnown RBP15.46■□□□□ 0.07
LITAF-201ENST00000339430 FAM20CQ8IXL6 584 aa15.46■□□□□ 0.07
LITAF-201ENST00000339430 GPR32P1Q8NGA4 272 aa15.46■□□□□ 0.07
LITAF-201ENST00000339430 OR14C36Q8NHC7 312 aa15.46■□□□□ 0.07
LITAF-201ENST00000339430 FCGR1BQ92637 280 aa15.46■□□□□ 0.07
LITAF-201ENST00000339430 KLK6Q92876 244 aa15.46■□□□□ 0.07
LITAF-201ENST00000339430 NEURL3Q96EH8 262 aa15.46■□□□□ 0.07
LITAF-201ENST00000339430 PDXPQ96GD0 296 aa15.46■□□□□ 0.07
LITAF-201ENST00000339430 MRGPRX1Q96LB2 322 aa15.46■□□□□ 0.07
LITAF-201ENST00000339430 RHBGQ9H310 441 aa15.46■□□□□ 0.07
LITAF-201ENST00000339430 OSGEPL1Q9H4B0 414 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms