RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 MYADMQ96S97 322 aa17.87■□□□□ 0.45
PSPC1-201ENST00000338910 KXD1Q9BQD3 176 aa17.87■□□□□ 0.45
PSPC1-201ENST00000338910 DOHHQ9BU89 302 aa17.87■□□□□ 0.45
PSPC1-201ENST00000338910 EBPLQ9BY08 206 aa17.87■□□□□ 0.45
PSPC1-201ENST00000338910 HHATLQ9HCP6 504 aa17.87■□□□□ 0.45
PSPC1-201ENST00000338910 CNOT2Q9NZN8 540 aaKnown RBP17.87■□□□□ 0.45
PSPC1-201ENST00000338910 SH3BGRLO75368 114 aa17.87■□□□□ 0.45
PSPC1-201ENST00000338910 EPHX1P07099 455 aa17.87■□□□□ 0.45
PSPC1-201ENST00000338910 MYL9P24844 172 aa17.87■□□□□ 0.45
PSPC1-201ENST00000338910 IFNA8P32881 189 aa17.87■□□□□ 0.45
PSPC1-201ENST00000338910 IL12RB1P42701 662 aa17.87■□□□□ 0.45
PSPC1-201ENST00000338910 OR3A3P47888 321 aa17.87■□□□□ 0.45
PSPC1-201ENST00000338910 EFR3AQ14156 821 aa17.87■□□□□ 0.45
PSPC1-201ENST00000338910 UGT8Q16880 541 aa17.87■□□□□ 0.45
PSPC1-201ENST00000338910 ANKRD54Q6NXT1 300 aa17.87■□□□□ 0.45
PSPC1-201ENST00000338910 TCTE3Q8IZS6 198 aa17.87■□□□□ 0.45
PSPC1-201ENST00000338910 SUSD6Q92537 303 aa17.87■□□□□ 0.45
PSPC1-201ENST00000338910 CHFRQ96EP1 664 aa17.87■□□□□ 0.45
PSPC1-201ENST00000338910 TOR4AQ9NXH8 423 aa17.87■□□□□ 0.45
PSPC1-201ENST00000338910 STMN3Q9NZ72 180 aa17.87■□□□□ 0.45
PSPC1-201ENST00000338910 KIF26AQ9ULI4 1882 aaPredicted RBP17.86■□□□□ 0.45
PSPC1-201ENST00000338910 NPC1O15118 1278 aa17.86■□□□□ 0.45
PSPC1-201ENST00000338910 CPNE3O75131 537 aaKnown RBP17.86■□□□□ 0.45
PSPC1-201ENST00000338910 PRPS1L1P21108 318 aa17.86■□□□□ 0.45
PSPC1-201ENST00000338910 IMPA1P29218 277 aa17.86■□□□□ 0.45
PSPC1-201ENST00000338910 ERP29P30040 261 aaKnown RBP17.86■□□□□ 0.45
PSPC1-201ENST00000338910 PKLRP30613 574 aa17.86■□□□□ 0.45
PSPC1-201ENST00000338910 RORCP51449 518 aa17.86■□□□□ 0.45
PSPC1-201ENST00000338910 BNC1Q01954 994 aa17.86■□□□□ 0.45
PSPC1-201ENST00000338910 FAPQ12884 760 aa17.86■□□□□ 0.45
PSPC1-201ENST00000338910 TSTA3Q13630 321 aaPredicted RBP17.86■□□□□ 0.45
PSPC1-201ENST00000338910 SF1Q15637 639 aaKnown RBP17.86■□□□□ 0.45
PSPC1-201ENST00000338910 RAB30Q15771 203 aa17.86■□□□□ 0.45
PSPC1-201ENST00000338910 GLYR1Q49A26 553 aaPredicted RBP17.86■□□□□ 0.45
PSPC1-201ENST00000338910 LIPJQ5W064 366 aa17.86■□□□□ 0.45
PSPC1-201ENST00000338910 SLC38A6Q8IZM9 456 aa17.86■□□□□ 0.45
PSPC1-201ENST00000338910 SIX5Q8N196 739 aa17.86■□□□□ 0.45
PSPC1-201ENST00000338910 WDR36Q8NI36 951 aaKnown RBP17.86■□□□□ 0.45
PSPC1-201ENST00000338910 CITED4Q96RK1 184 aa17.86■□□□□ 0.45
PSPC1-201ENST00000338910 C11orf54Q9H0W9 315 aaPredicted RBP17.86■□□□□ 0.45
PSPC1-201ENST00000338910 CHST8Q9H2A9 424 aa17.86■□□□□ 0.45
PSPC1-201ENST00000338910 EXOSC4Q9NPD3 245 aaKnown RBP17.86■□□□□ 0.45
PSPC1-201ENST00000338910 HCN2Q9UL51 889 aa17.86■□□□□ 0.45
PSPC1-201ENST00000338910 SEC14L5O43304 696 aa17.86■□□□□ 0.45
PSPC1-201ENST00000338910 PCSK2P16519 638 aa17.86■□□□□ 0.45
PSPC1-201ENST00000338910 AMD1P17707 334 aa17.86■□□□□ 0.45
PSPC1-201ENST00000338910 AQP1P29972 269 aa17.86■□□□□ 0.45
PSPC1-201ENST00000338910 PCDH1Q08174 1060 aa17.86■□□□□ 0.45
PSPC1-201ENST00000338910 HKDC1Q2TB90 917 aa17.86■□□□□ 0.45
PSPC1-201ENST00000338910 PLAG1Q6DJT9 500 aa17.86■□□□□ 0.45
PSPC1-201ENST00000338910 YAF2Q8IY57 180 aa17.86■□□□□ 0.45
PSPC1-201ENST00000338910 CLECL1Q8IZS7 167 aa17.86■□□□□ 0.45
PSPC1-201ENST00000338910 FAM109AQ8N4B1 249 aa17.86■□□□□ 0.45
PSPC1-201ENST00000338910 TP53I13Q8NBR0 393 aaPredicted RBP17.86■□□□□ 0.45
PSPC1-201ENST00000338910 OR5H6Q8NGV6 325 aa17.86■□□□□ 0.45
PSPC1-201ENST00000338910 FGF14Q92915 247 aa17.86■□□□□ 0.45
PSPC1-201ENST00000338910 PPP1R16AQ96I34 528 aa17.86■□□□□ 0.45
PSPC1-201ENST00000338910 FRMD6Q96NE9 622 aa17.86■□□□□ 0.45
PSPC1-201ENST00000338910 DHRS9Q9BPW9 319 aa17.86■□□□□ 0.45
PSPC1-201ENST00000338910 RPP25Q9BUL9 199 aaKnown RBP17.86■□□□□ 0.45
PSPC1-201ENST00000338910 TPT1P8Q9HAU6 139 aa17.86■□□□□ 0.45
PSPC1-201ENST00000338910 SH3D21A4FU49 640 aa17.85■□□□□ 0.45
PSPC1-201ENST00000338910 NPIPB8E9PQR5 432 aa17.85■□□□□ 0.45
PSPC1-201ENST00000338910 SCG5P05408 212 aa17.85■□□□□ 0.45
PSPC1-201ENST00000338910 SRSF11Q05519 484 aaKnown RBP17.85■□□□□ 0.45
PSPC1-201ENST00000338910 MICAQ29983 383 aa17.85■□□□□ 0.45
PSPC1-201ENST00000338910 FAM214AQ32MH5 1076 aa17.85■□□□□ 0.45
PSPC1-201ENST00000338910 SLC35F1Q5T1Q4 408 aa17.85■□□□□ 0.45
PSPC1-201ENST00000338910 ADNP2Q6IQ32 1131 aa17.85■□□□□ 0.45
PSPC1-201ENST00000338910 NOXRED1Q6NXP6 359 aa17.85■□□□□ 0.45
PSPC1-201ENST00000338910 PARM1Q6UWI2 310 aa17.85■□□□□ 0.45
PSPC1-201ENST00000338910 TMEM184AQ6ZMB5 413 aa17.85■□□□□ 0.45
PSPC1-201ENST00000338910 ERN2Q76MJ5 926 aaKnown RBP17.85■□□□□ 0.45
PSPC1-201ENST00000338910 CCDC28AQ8IWP9 274 aa17.85■□□□□ 0.45
PSPC1-201ENST00000338910 LGI4Q8N135 537 aa17.85■□□□□ 0.45
PSPC1-201ENST00000338910 OR52J3Q8NH60 311 aa17.85■□□□□ 0.45
PSPC1-201ENST00000338910 SPPL2AQ8TCT8 520 aa17.85■□□□□ 0.45
PSPC1-201ENST00000338910 SNAPC3Q92966 411 aa17.85■□□□□ 0.45
PSPC1-201ENST00000338910 REPS1Q96D71 796 aa17.85■□□□□ 0.45
PSPC1-201ENST00000338910 MKRN2Q9H000 416 aaKnown RBP17.85■□□□□ 0.45
PSPC1-201ENST00000338910 RNF121Q9H920 327 aa17.85■□□□□ 0.45
PSPC1-201ENST00000338910 PRKAB1Q9Y478 270 aa17.85■□□□□ 0.45
PSPC1-201ENST00000338910 COL4A3Q01955 1670 aa17.85■□□□□ 0.45
PSPC1-201ENST00000338910 MUC22E2RYF6 1773 aaPredicted RBP17.84■□□□□ 0.45
PSPC1-201ENST00000338910 IQCMA0A1B0GVH7 501 aa17.84■□□□□ 0.45
PSPC1-201ENST00000338910 OR6C70A6NIJ9 312 aa17.84■□□□□ 0.45
PSPC1-201ENST00000338910 LILRB5O75023 590 aa17.84■□□□□ 0.45
PSPC1-201ENST00000338910 GCM2O75603 506 aaPredicted RBP17.84■□□□□ 0.45
PSPC1-201ENST00000338910 CPSF4O95639 269 aaKnown RBP17.84■□□□□ 0.45
PSPC1-201ENST00000338910 ACPPP15309 386 aa17.84■□□□□ 0.45
PSPC1-201ENST00000338910 WASP42768 502 aa17.84■□□□□ 0.45
PSPC1-201ENST00000338910 DAB2P98082 770 aa17.84■□□□□ 0.45
PSPC1-201ENST00000338910 GDPGP1Q6ZNW5 385 aa17.84■□□□□ 0.45
PSPC1-201ENST00000338910 TRMT11Q7Z4G4 463 aaKnown RBP17.84■□□□□ 0.45
PSPC1-201ENST00000338910 SPERTQ8NA61 448 aa17.84■□□□□ 0.45
PSPC1-201ENST00000338910 SPATA9Q9BWV2 254 aa17.84■□□□□ 0.45
PSPC1-201ENST00000338910 SNTG1Q9NSN8 517 aa17.84■□□□□ 0.45
PSPC1-201ENST00000338910 CMAHPQ9Y471 501 aa17.84■□□□□ 0.45
PSPC1-201ENST00000338910 PCDHB11Q9Y5F2 797 aa17.84■□□□□ 0.45
PSPC1-201ENST00000338910 AP1M2Q9Y6Q5 423 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms