RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 RETP07949 1114 aa7.84□□□□□ -1.15
HPS4-201ENST00000336873 DCKP27707 260 aa7.84□□□□□ -1.15
HPS4-201ENST00000336873 PGDP52209 483 aa7.84□□□□□ -1.15
HPS4-201ENST00000336873 SELENOWP63302 87 aa7.84□□□□□ -1.15
HPS4-201ENST00000336873 DEFB110Q30KQ9 67 aa7.84□□□□□ -1.15
HPS4-201ENST00000336873 ZNF791Q3KP31 576 aaPredicted RBP7.84□□□□□ -1.15
HPS4-201ENST00000336873 SMUG1Q53HV7 270 aa7.84□□□□□ -1.15
HPS4-201ENST00000336873 SPIN4Q56A73 249 aa7.84□□□□□ -1.15
HPS4-201ENST00000336873 SDE2Q6IQ49 451 aa7.84□□□□□ -1.15
HPS4-201ENST00000336873 FIGNL1Q6PIW4 674 aa7.84□□□□□ -1.15
HPS4-201ENST00000336873 TMEM150AQ86TG1 271 aa7.84□□□□□ -1.15
HPS4-201ENST00000336873 TCEAL8Q8IYN2 117 aa7.84□□□□□ -1.15
HPS4-201ENST00000336873 HORMAD2Q8N7B1 307 aa7.84□□□□□ -1.15
HPS4-201ENST00000336873 STARD8Q92502 1023 aa7.84□□□□□ -1.15
HPS4-201ENST00000336873 C16orf58Q96GQ5 468 aa7.84□□□□□ -1.15
HPS4-201ENST00000336873 DPH7Q9BTV6 452 aa7.84□□□□□ -1.15
HPS4-201ENST00000336873 EFCAB11Q9BUY7 163 aa7.84□□□□□ -1.15
HPS4-201ENST00000336873 RACGAP1Q9H0H5 632 aa7.84□□□□□ -1.15
HPS4-201ENST00000336873 CSNK1G3Q9Y6M4 447 aa7.84□□□□□ -1.15
HPS4-201ENST00000336873 FAM240BA0A1B0GVZ2 78 aa7.84□□□□□ -1.16
HPS4-201ENST00000336873 CLDN24A6NM45 220 aa7.84□□□□□ -1.16
HPS4-201ENST00000336873 A8MUA0 341 aa7.84□□□□□ -1.16
HPS4-201ENST00000336873 UPK1AO00322 258 aa7.84□□□□□ -1.16
HPS4-201ENST00000336873 GAPDHSO14556 408 aaPredicted RBP7.84□□□□□ -1.16
HPS4-201ENST00000336873 OXSR1O95747 527 aaPredicted RBP7.84□□□□□ -1.16
HPS4-201ENST00000336873 GYPBP06028 91 aa7.84□□□□□ -1.16
HPS4-201ENST00000336873 HPGDP15428 266 aa7.84□□□□□ -1.16
HPS4-201ENST00000336873 CPN2P22792 545 aa7.84□□□□□ -1.16
HPS4-201ENST00000336873 RPL4P36578 427 aaKnown RBP7.84□□□□□ -1.16
HPS4-201ENST00000336873 SLC15A1P46059 708 aa7.84□□□□□ -1.16
HPS4-201ENST00000336873 WDR5P61964 334 aaKnown RBP7.84□□□□□ -1.16
HPS4-201ENST00000336873 SNRPD2P62316 118 aaKnown RBP7.84□□□□□ -1.16
HPS4-201ENST00000336873 TAP2Q03519 686 aa7.84□□□□□ -1.16
HPS4-201ENST00000336873 SLC3A1Q07837 685 aa7.84□□□□□ -1.16
HPS4-201ENST00000336873 ZXDCQ2QGD7 858 aaPredicted RBP7.84□□□□□ -1.16
HPS4-201ENST00000336873 PUS10Q3MIT2 529 aaKnown RBP7.84□□□□□ -1.16
HPS4-201ENST00000336873 PLEKHS1Q5SXH7 462 aa7.84□□□□□ -1.16
HPS4-201ENST00000336873 LIPJQ5W064 366 aa7.84□□□□□ -1.16
HPS4-201ENST00000336873 TMEM215Q68D42 235 aa7.84□□□□□ -1.16
HPS4-201ENST00000336873 DESI1Q6ICB0 168 aa7.84□□□□□ -1.16
HPS4-201ENST00000336873 REEP3Q6NUK4 255 aa7.84□□□□□ -1.16
HPS4-201ENST00000336873 LAPTM4BQ86VI4 370 aa7.84□□□□□ -1.16
HPS4-201ENST00000336873 TSPYL5Q86VY4 417 aaPredicted RBP7.84□□□□□ -1.16
HPS4-201ENST00000336873 PIAS4Q8N2W9 510 aaPredicted RBP7.84□□□□□ -1.16
HPS4-201ENST00000336873 GGHQ92820 318 aa7.84□□□□□ -1.16
HPS4-201ENST00000336873 SLC38A4Q969I6 547 aa7.84□□□□□ -1.16
HPS4-201ENST00000336873 TSACCQ96A04 125 aaPredicted RBP7.84□□□□□ -1.16
HPS4-201ENST00000336873 UHRF1Q96T88 793 aaPredicted RBP7.84□□□□□ -1.16
HPS4-201ENST00000336873 LGR4Q9BXB1 951 aa7.84□□□□□ -1.16
HPS4-201ENST00000336873 OR51I1Q9H343 314 aa7.84□□□□□ -1.16
HPS4-201ENST00000336873 C11orf49Q9H6J7 331 aa7.84□□□□□ -1.16
HPS4-201ENST00000336873 ELAC1Q9H777 363 aaKnown RBP7.84□□□□□ -1.16
HPS4-201ENST00000336873 WDR26Q9H7D7 661 aa7.84□□□□□ -1.16
HPS4-201ENST00000336873 IL21Q9HBE4 155 aa7.84□□□□□ -1.16
HPS4-201ENST00000336873 TRPV5Q9NQA5 729 aa7.84□□□□□ -1.16
HPS4-201ENST00000336873 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.84□□□□□ -1.16
HPS4-201ENST00000336873 ENPP5Q9UJA9 477 aa7.84□□□□□ -1.16
HPS4-201ENST00000336873 ZNF780BQ9Y6R6 833 aa7.84□□□□□ -1.16
HPS4-201ENST00000336873 TRIOO75962 3097 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 CD8B2A6NJW9 211 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 CENPXA8MT69 81 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 PRRT4C9JH25 899 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 ANKRD28O15084 1053 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 EFCAB14O75071 495 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 REM1O75628 298 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 GKN3PP0CG01 181 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 CD8BP10966 210 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 PEPDP12955 493 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 BMP7P18075 431 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 IL1RNP18510 177 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 IDSP22304 550 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 OR2B6P58173 313 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 MRPL28Q13084 256 aaKnown RBP7.83□□□□□ -1.16
HPS4-201ENST00000336873 SLAMF1Q13291 335 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 SLC9A5Q14940 896 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 ANGPT1Q15389 498 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 ZNF311Q5JNZ3 666 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 IDNKQ5T6J7 187 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 GTF2IRD2BQ6EKJ0 949 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 XAF1Q6GPH4 301 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 ARL9Q6T311 187 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 GTF2IRD2Q86UP8 949 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 RIMKLAQ8IXN7 391 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 CELF2-AS1Q8N7Q2 184 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 TRUB1Q8WWH5 349 aaKnown RBP7.83□□□□□ -1.16
HPS4-201ENST00000336873 GEMIN6Q8WXD5 167 aaKnown RBP7.83□□□□□ -1.16
HPS4-201ENST00000336873 ZBED6CLQ96FA7 236 aaPredicted RBP7.83□□□□□ -1.16
HPS4-201ENST00000336873 ZNF300Q96RE9 604 aaPredicted RBP7.83□□□□□ -1.16
HPS4-201ENST00000336873 WACQ9BTA9 647 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 TSSK6Q9BXA6 273 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 CWH43Q9H720 699 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 MRPS30Q9NP92 439 aaKnown RBP7.83□□□□□ -1.16
HPS4-201ENST00000336873 NLGN3Q9NZ94 848 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 NDUFAF4Q9P032 175 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 BTN3A3O00478 584 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 SLC9A3R1O14745 358 aaPredicted RBP7.83□□□□□ -1.16
HPS4-201ENST00000336873 FZD6O60353 706 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 NCR1O76036 304 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 ABLIM3O94929 683 aa7.83□□□□□ -1.16
HPS4-201ENST00000336873 CTSLP07711 333 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms