RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 TMEM234Q8WY98 164 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 TMEM41AQ96HV5 264 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 SPACA7Q96KW9 195 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 LHPPQ9H008 270 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 GBA2Q9HCG7 927 aaPredicted RBP5.31□□□□□ -1.56
PTPRB-202ENST00000334414 MED17Q9NVC6 651 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 ABRACLQ9P1F3 81 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 UTS2RQ9UKP6 389 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 RIMS1Q86UR5 1692 aaKnown RBP5.31□□□□□ -1.56
PTPRB-202ENST00000334414 C1QTNF8P60827 252 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 PSPHP78330 225 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 TIGD3Q6B0B8 471 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 UNC5DQ6UXZ4 953 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 B3GLCTQ6Y288 498 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 ZNF704Q6ZNC4 412 aaPredicted RBP5.31□□□□□ -1.56
PTPRB-202ENST00000334414 ANKRD46Q86W74 232 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 ZMIZ2Q8NF64 920 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 SLC16A10Q8TF71 515 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 EBPLQ9BY08 206 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 SMOXQ9NWM0 555 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 KCNK2O95069 426 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 SCGB1D1O95968 90 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 LALBAP00709 142 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 METTL15P1P0C7V9 234 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 GRM2Q14416 872 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 ZNF678Q5SXM1 525 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 NANOGP8Q6NSW7 305 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 B3GNT7Q8NFL0 401 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 OR6Q1Q8NGQ2 317 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 SLC6A7Q99884 636 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 NANOGQ9H9S0 305 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 ZDHHC3Q9NYG2 299 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 C19orf25Q9UFG5 118 aaPredicted RBP5.31□□□□□ -1.56
PTPRB-202ENST00000334414 MYH3P11055 1940 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 LOC285095A0A1B0GVY8 99 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 NT5EP21589 574 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 DLX5P56178 289 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 DESI1Q6ICB0 168 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 CES5AQ6NT32 575 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 RBMS3Q6XE24 437 aaKnown RBP5.3□□□□□ -1.56
PTPRB-202ENST00000334414 IGFN1Q86VF2 1251 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 RNF130Q86XS8 419 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 FOXRED2Q8IWF2 684 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 IQCF1Q8N6M8 205 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 OVCA2Q8WZ82 227 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 NSMAFQ92636 917 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 CRTAC1Q9NQ79 661 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 PCDHB9Q9Y5E1 797 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 WIF1Q9Y5W5 379 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 LTN1O94822 1766 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 HHLA1C9JL84 531 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 J3QLW9 94 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 CD48P09326 243 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 ZNF19P17023 458 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 CD81P60033 236 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 COTL1Q14019 142 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 NFIXQ14938 502 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 UPP1Q16831 310 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 KDELC1Q6UW63 502 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 LDB1Q86U70 411 aaPredicted RBP5.3□□□□□ -1.56
PTPRB-202ENST00000334414 C1orf87Q8N0U7 546 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 ZNF808Q8N4W9 903 aaPredicted RBP5.3□□□□□ -1.56
PTPRB-202ENST00000334414 NANPQ8TBE9 248 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 ADAMTS14Q8WXS8 1223 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 SH3YL1Q96HL8 342 aaPredicted RBP5.3□□□□□ -1.56
PTPRB-202ENST00000334414 SLC6A5Q9Y345 797 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 COQ4Q9Y3A0 265 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 ETV7Q9Y603 341 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 FER1L4A9Z1Z3 1794 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 NPC1O15118 1278 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 MTNR1AP48039 350 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 NKX3-2P78367 333 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 IL17AQ16552 155 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 TOR1AIP1Q5JTV8 583 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 C22orf42Q6IC83 251 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 SLC29A4Q7RTT9 530 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 CLDN22Q8N7P3 220 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 PLPP5Q8NEB5 264 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 TMEM185AQ8NFB2 350 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 SLC22A8Q8TCC7 542 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 WFIKKN2Q8TEU8 576 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 SLC25A32Q9H2D1 315 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 C8orf33Q9H7E9 229 aaPredicted RBP5.3□□□□□ -1.56
PTPRB-202ENST00000334414 HIF3AQ9Y2N7 669 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 PRELID3BQ9Y3B1 194 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 UGT2A1Q9Y4X1 527 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 ZNF705FA8MVS1 300 aaPredicted RBP5.3□□□□□ -1.56
PTPRB-202ENST00000334414 NFKBIEO00221 500 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 ADAM23O75077 832 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 B3GALNT1O75752 331 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 EGFP01133 1207 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 ZNF705DP0CH99 300 aaPredicted RBP5.3□□□□□ -1.56
PTPRB-202ENST00000334414 ZNF705BP0CI00 300 aaPredicted RBP5.3□□□□□ -1.56
PTPRB-202ENST00000334414 UNGP13051 313 aaPredicted RBP5.3□□□□□ -1.56
PTPRB-202ENST00000334414 SF1Q15637 639 aaKnown RBP5.3□□□□□ -1.56
PTPRB-202ENST00000334414 RNF212Q495C1 297 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 TMEM41BQ5BJD5 291 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 COL13A1Q5TAT6 717 aaPredicted RBP5.3□□□□□ -1.56
PTPRB-202ENST00000334414 ELP2Q6IA86 826 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 SLC9B2Q86UD5 537 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms