RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 GDF10P55107 478 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 RAB38P57729 211 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 ARG2P78540 354 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 MPP3Q13368 585 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 NAB1Q13506 487 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 PTPRCAPQ14761 206 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 MLC1Q15049 377 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 TPSAB1Q15661 275 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 CTU2Q2VPK5 515 aaKnown RBP1.36□□□□□ -2.19
LINC00643-201ENST00000334389 KRTAP27-1Q3LI81 207 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 PDCD4Q53EL6 469 aaKnown RBP1.36□□□□□ -2.19
LINC00643-201ENST00000334389 TECRLQ5HYJ1 363 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 TTC38Q5R3I4 469 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 PLBD1Q6P4A8 553 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 LEG1Q6P5S2 330 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 CNSTQ6PJW8 725 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 MFSD7Q6UXD7 560 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 Q6ZT83 130 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 TMEM126BQ8IUX1 230 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 DENND1CQ8IV53 801 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 DCUN1D3Q8IWE4 304 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 PIANPQ8IYJ0 282 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 FITM2Q8N6M3 262 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 SLC26A10Q8NG04 563 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 UBASH3BQ8TF42 649 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 STON2Q8WXE9 905 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 LINC00476Q8WZB0 136 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 DDB2Q92466 427 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 ZNF597Q96LX8 424 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 OLFM3Q96PB7 478 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 CYP2S1Q96SQ9 504 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 DOK1Q99704 481 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 ZNF670Q9BS34 389 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 ACTR6Q9GZN1 396 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 LIN7BQ9HAP6 207 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 PRM3Q9NNZ6 103 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 MS4A12Q9NXJ0 267 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 NSMCE4AQ9NXX6 385 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 KLK14Q9P0G3 267 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 UVRAGQ9P2Y5 699 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 GTF3C4Q9UKN8 822 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 GRID1Q9ULK0 1009 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP1.36□□□□□ -2.19
LINC00643-201ENST00000334389 NFU1Q9UMS0 254 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 CTNND2Q9UQB3 1225 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 RCE1Q9Y256 329 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 ZNF711Q9Y462 761 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 UTP18Q9Y5J1 556 aaKnown RBP eCLIP1.36□□□□□ -2.19
LINC00643-201ENST00000334389 ACTL7AQ9Y615 435 aa1.36□□□□□ -2.19
LINC00643-201ENST00000334389 HEATR5AQ86XA9 2040 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 TRAV2A0A0B4J234 112 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 A8MU76 341 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 ANKRD63C9JTQ0 380 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 MMP20O60882 483 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 FAM20BO75063 409 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 PHACTR2O75167 634 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 IGHV2-5P01817 119 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 UGT2B4P06133 528 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 ENO3P13929 434 aaPredicted RBP1.35□□□□□ -2.19
LINC00643-201ENST00000334389 PRKCAP17252 672 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 TSPAN8P19075 237 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 PSMA4P25789 261 aaKnown RBP1.35□□□□□ -2.19
LINC00643-201ENST00000334389 SSR1P43307 286 aaKnown RBP1.35□□□□□ -2.19
LINC00643-201ENST00000334389 PXNP49023 591 aaPredicted RBP1.35□□□□□ -2.19
LINC00643-201ENST00000334389 PEX3P56589 373 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 SLC35A2P78381 396 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 REEP5Q00765 189 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 GALK2Q01415 458 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 AKAP17AQ02040 695 aaKnown RBP1.35□□□□□ -2.19
LINC00643-201ENST00000334389 MERTKQ12866 999 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 PIN1Q13526 163 aaPredicted RBP1.35□□□□□ -2.19
LINC00643-201ENST00000334389 GRB7Q14451 532 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 KRT72Q14CN4 511 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 TRIP10Q15642 601 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 C8orf34Q49A92 452 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 PDSS1Q5T2R2 415 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 MBNL2Q5VZF2 373 aaKnown RBP1.35□□□□□ -2.19
LINC00643-201ENST00000334389 AAGABQ6PD74 315 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 RBM43Q6ZSC3 357 aaKnown RBP1.35□□□□□ -2.19
LINC00643-201ENST00000334389 IL17RELQ6ZVW7 336 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 IGFN1Q86VF2 1251 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 LIX1LQ8IVB5 337 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 RCBTB1Q8NDN9 531 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 OR1N1Q8NGS0 311 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 SLC35G2Q8TBE7 412 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 ZNF398Q8TD17 642 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 RNF128Q8TEB7 428 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 FAM168AQ92567 244 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 ABTB1Q969K4 478 aaPredicted RBP1.35□□□□□ -2.19
LINC00643-201ENST00000334389 TMEM125Q96AQ2 219 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 TMEM186Q96B77 213 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 ZG16BQ96DA0 208 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 IMP4Q96G21 291 aaKnown RBP1.35□□□□□ -2.19
LINC00643-201ENST00000334389 COG8Q96MW5 612 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 COL21A1Q96P44 957 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 DGAT2Q96PD7 388 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 BTBD9Q96Q07 612 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 RHOFQ9HBH0 211 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 GALNT8Q9NY28 637 aa1.35□□□□□ -2.19
LINC00643-201ENST00000334389 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms