RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 LHCGRP22888 699 aa17.3■□□□□ 0.36
PKP3-201ENST00000331563 SELENOWP63302 87 aa17.3■□□□□ 0.36
PKP3-201ENST00000331563 PCDH1Q08174 1060 aa17.3■□□□□ 0.36
PKP3-201ENST00000331563 TSEN54Q7Z6J9 526 aaKnown RBP17.3■□□□□ 0.36
PKP3-201ENST00000331563 DENND1CQ8IV53 801 aa17.3■□□□□ 0.36
PKP3-201ENST00000331563 CRIPAKQ8N1N5 446 aa17.3■□□□□ 0.36
PKP3-201ENST00000331563 FATE1Q969F0 183 aa17.3■□□□□ 0.36
PKP3-201ENST00000331563 KIAA1143Q96AT1 154 aaPredicted RBP17.3■□□□□ 0.36
PKP3-201ENST00000331563 SHARPINQ9H0F6 387 aa17.3■□□□□ 0.36
PKP3-201ENST00000331563 PCDHGC4Q9Y5F7 938 aa17.3■□□□□ 0.36
PKP3-201ENST00000331563 NUPL2O15504 423 aaKnown RBP17.29■□□□□ 0.36
PKP3-201ENST00000331563 HPGDSO60760 199 aa17.29■□□□□ 0.36
PKP3-201ENST00000331563 STK16O75716 305 aa17.29■□□□□ 0.36
PKP3-201ENST00000331563 TPOP07202 933 aa17.29■□□□□ 0.36
PKP3-201ENST00000331563 ZP3P21754 424 aa17.29■□□□□ 0.36
PKP3-201ENST00000331563 CRATP43155 626 aa17.29■□□□□ 0.36
PKP3-201ENST00000331563 CLCN4P51793 760 aa17.29■□□□□ 0.36
PKP3-201ENST00000331563 PTPN5P54829 565 aa17.29■□□□□ 0.36
PKP3-201ENST00000331563 ERVFC1P60507 584 aa17.29■□□□□ 0.36
PKP3-201ENST00000331563 ABRQ12979 859 aa17.29■□□□□ 0.36
PKP3-201ENST00000331563 GPR17Q13304 367 aa17.29■□□□□ 0.36
PKP3-201ENST00000331563 IFI44LQ53G44 452 aa17.29■□□□□ 0.36
PKP3-201ENST00000331563 SYNPOQ8N3V7 929 aa17.29■□□□□ 0.36
PKP3-201ENST00000331563 SYT14Q8NB59 555 aa17.29■□□□□ 0.36
PKP3-201ENST00000331563 FAM46DQ8NEK8 389 aa17.29■□□□□ 0.36
PKP3-201ENST00000331563 ZSWIM3Q96MP5 696 aa17.29■□□□□ 0.36
PKP3-201ENST00000331563 MAPKAP1Q9BPZ7 522 aa17.29■□□□□ 0.36
PKP3-201ENST00000331563 RDH8Q9NYR8 311 aa17.29■□□□□ 0.36
PKP3-201ENST00000331563 SH3BP4Q9P0V3 963 aa17.29■□□□□ 0.36
PKP3-201ENST00000331563 YARS2Q9Y2Z4 477 aaKnown RBP17.29■□□□□ 0.36
PKP3-201ENST00000331563 OARD1Q9Y530 152 aa17.29■□□□□ 0.36
PKP3-201ENST00000331563 SNX11Q9Y5W9 270 aa17.29■□□□□ 0.36
PKP3-201ENST00000331563 SPIN1Q9Y657 262 aaPredicted RBP17.29■□□□□ 0.36
PKP3-201ENST00000331563 FKBP7Q9Y680 259 aa17.29■□□□□ 0.36
PKP3-201ENST00000331563 A0A0B4J203 849 aa17.29■□□□□ 0.36
PKP3-201ENST00000331563 A0A1B0GVM2 712 aa17.29■□□□□ 0.36
PKP3-201ENST00000331563 KHNYNO15037 678 aaKnown RBP17.29■□□□□ 0.36
PKP3-201ENST00000331563 GJB5O95377 273 aa17.29■□□□□ 0.36
PKP3-201ENST00000331563 GNRH1P01148 92 aa17.29■□□□□ 0.36
PKP3-201ENST00000331563 ACPPP15309 386 aa17.29■□□□□ 0.36
PKP3-201ENST00000331563 CTPS1P17812 591 aa17.29■□□□□ 0.36
PKP3-201ENST00000331563 SSTR2P30874 369 aa17.29■□□□□ 0.36
PKP3-201ENST00000331563 LRRC32Q14392 662 aa17.29■□□□□ 0.36
PKP3-201ENST00000331563 SPDYE7PQ495Y7 208 aa17.29■□□□□ 0.36
PKP3-201ENST00000331563 FIP1L1Q6UN15 594 aaKnown RBP17.29■□□□□ 0.36
PKP3-201ENST00000331563 TFAP2EQ6VUC0 442 aa17.29■□□□□ 0.36
PKP3-201ENST00000331563 DNAJC5GQ8N7S2 189 aa17.29■□□□□ 0.36
PKP3-201ENST00000331563 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.29■□□□□ 0.36
PKP3-201ENST00000331563 ZC3HAV1LQ96H79 300 aaKnown RBP17.29■□□□□ 0.36
PKP3-201ENST00000331563 TRIB3Q96RU7 358 aa17.29■□□□□ 0.36
PKP3-201ENST00000331563 NTMT1Q9BV86 223 aa17.29■□□□□ 0.36
PKP3-201ENST00000331563 SLC29A3Q9BZD2 475 aa17.29■□□□□ 0.36
PKP3-201ENST00000331563 HEXA-AS1Q9H8Q6 139 aa17.29■□□□□ 0.36
PKP3-201ENST00000331563 B3GAT2Q9NPZ5 323 aa17.29■□□□□ 0.36
PKP3-201ENST00000331563 GKN1Q9NS71 199 aa17.29■□□□□ 0.36
PKP3-201ENST00000331563 LSM2Q9Y333 95 aaKnown RBP17.29■□□□□ 0.36
PKP3-201ENST00000331563 REV3LO60673 3130 aa17.29■□□□□ 0.36
PKP3-201ENST00000331563 CASKO14936 926 aa17.29■□□□□ 0.36
PKP3-201ENST00000331563 RNGTTO60942 597 aaKnown RBP17.29■□□□□ 0.36
PKP3-201ENST00000331563 SOX14O95416 240 aa17.29■□□□□ 0.36
PKP3-201ENST00000331563 IFNA7P01567 189 aa17.29■□□□□ 0.36
PKP3-201ENST00000331563 PRPS1L1P21108 318 aa17.29■□□□□ 0.36
PKP3-201ENST00000331563 CLCNKAP51800 687 aa17.29■□□□□ 0.36
PKP3-201ENST00000331563 CRISP1P54107 249 aa17.29■□□□□ 0.36
PKP3-201ENST00000331563 CRTC2Q53ET0 693 aaPredicted RBP17.29■□□□□ 0.36
PKP3-201ENST00000331563 KLHL22Q53GT1 634 aa17.29■□□□□ 0.36
PKP3-201ENST00000331563 BCL2L15Q5TBC7 163 aa17.29■□□□□ 0.36
PKP3-201ENST00000331563 BICRALQ6AI39 1079 aa17.29■□□□□ 0.36
PKP3-201ENST00000331563 LRFN4Q6PJG9 635 aa17.29■□□□□ 0.36
PKP3-201ENST00000331563 ZNF704Q6ZNC4 412 aaPredicted RBP17.29■□□□□ 0.36
PKP3-201ENST00000331563 BCDIN3DQ7Z5W3 292 aaKnown RBP17.29■□□□□ 0.36
PKP3-201ENST00000331563 LUZP2Q86TE4 346 aa17.29■□□□□ 0.36
PKP3-201ENST00000331563 C11orf65Q8NCR3 313 aa17.29■□□□□ 0.36
PKP3-201ENST00000331563 OR52P1PQ8NH57 321 aa17.29■□□□□ 0.36
PKP3-201ENST00000331563 CHTF18Q8WVB6 975 aa17.29■□□□□ 0.36
PKP3-201ENST00000331563 CINPQ9BW66 212 aaPredicted RBP17.29■□□□□ 0.36
PKP3-201ENST00000331563 PIGUQ9H490 435 aa17.29■□□□□ 0.36
PKP3-201ENST00000331563 SLC28A3Q9HAS3 691 aa17.29■□□□□ 0.36
PKP3-201ENST00000331563 ACSL5Q9ULC5 683 aa17.29■□□□□ 0.36
PKP3-201ENST00000331563 TLR4O00206 839 aa17.28■□□□□ 0.36
PKP3-201ENST00000331563 PRAMEF11O60813 436 aa17.28■□□□□ 0.36
PKP3-201ENST00000331563 LGI1O95970 557 aa17.28■□□□□ 0.36
PKP3-201ENST00000331563 MAOBP27338 520 aa17.28■□□□□ 0.36
PKP3-201ENST00000331563 ZNF81P51508 661 aa17.28■□□□□ 0.36
PKP3-201ENST00000331563 FRMPD2BQ6IN97 320 aa17.28■□□□□ 0.36
PKP3-201ENST00000331563 NOXRED1Q6NXP6 359 aa17.28■□□□□ 0.36
PKP3-201ENST00000331563 CLDN19Q8N6F1 224 aa17.28■□□□□ 0.36
PKP3-201ENST00000331563 MCOLN1Q9GZU1 580 aa17.28■□□□□ 0.36
PKP3-201ENST00000331563 ELAC1Q9H777 363 aaKnown RBP17.28■□□□□ 0.36
PKP3-201ENST00000331563 PCDHB11Q9Y5F2 797 aa17.28■□□□□ 0.36
PKP3-201ENST00000331563 OR6C75A6NL08 312 aa17.28■□□□□ 0.36
PKP3-201ENST00000331563 H3BN98 237 aa17.28■□□□□ 0.36
PKP3-201ENST00000331563 PITPNM1O00562 1244 aa17.28■□□□□ 0.36
PKP3-201ENST00000331563 GMDSO60547 372 aa17.28■□□□□ 0.36
PKP3-201ENST00000331563 GADD45GO95257 159 aa17.28■□□□□ 0.36
PKP3-201ENST00000331563 AP1S2P56377 157 aa17.28■□□□□ 0.36
PKP3-201ENST00000331563 PPP3R1P63098 170 aa17.28■□□□□ 0.36
PKP3-201ENST00000331563 SRSF11Q05519 484 aaKnown RBP17.28■□□□□ 0.36
PKP3-201ENST00000331563 GPR68Q15743 365 aa17.28■□□□□ 0.36
PKP3-201ENST00000331563 TUSC1Q2TAM9 212 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms