RNA–Protein interactions for RNA: ENST00000328863.8

CLRN1-203, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-203ENST00000328863 CHTF18Q8WVB6 975 aa13.82□□□□□ -0.2
CLRN1-203ENST00000328863 APIPQ96GX9 242 aa13.82□□□□□ -0.2
CLRN1-203ENST00000328863 FBXL20Q96IG2 436 aa13.82□□□□□ -0.2
CLRN1-203ENST00000328863 EBPLQ9BY08 206 aa13.82□□□□□ -0.2
CLRN1-203ENST00000328863 KCNK9Q9NPC2 374 aa13.82□□□□□ -0.2
CLRN1-203ENST00000328863 PCDHA9Q9Y5H5 950 aa13.82□□□□□ -0.2
CLRN1-203ENST00000328863 SLC28A1O00337 649 aa13.81□□□□□ -0.2
CLRN1-203ENST00000328863 BIRC5O15392 142 aa13.81□□□□□ -0.2
CLRN1-203ENST00000328863 F10P00742 488 aa13.81□□□□□ -0.2
CLRN1-203ENST00000328863 CHRNGP07510 517 aa13.81□□□□□ -0.2
CLRN1-203ENST00000328863 GALNSP34059 522 aa13.81□□□□□ -0.2
CLRN1-203ENST00000328863 ALDH9A1P49189 494 aa13.81□□□□□ -0.2
CLRN1-203ENST00000328863 HEPACAMQ14CZ8 416 aa13.81□□□□□ -0.2
CLRN1-203ENST00000328863 NR6A1Q15406 480 aa13.81□□□□□ -0.2
CLRN1-203ENST00000328863 INPP5JQ15735 1006 aaPredicted RBP13.81□□□□□ -0.2
CLRN1-203ENST00000328863 PLEKHN1Q494U1 663 aaPredicted RBP13.81□□□□□ -0.2
CLRN1-203ENST00000328863 ARL13AQ5H913 290 aaPredicted RBP13.81□□□□□ -0.2
CLRN1-203ENST00000328863 SH2D4BQ5SQS7 431 aa13.81□□□□□ -0.2
CLRN1-203ENST00000328863 SCIMPQ6UWF3 145 aa13.81□□□□□ -0.2
CLRN1-203ENST00000328863 FAM180AQ6UWF9 173 aa13.81□□□□□ -0.2
CLRN1-203ENST00000328863 HSDL2Q6YN16 418 aa13.81□□□□□ -0.2
CLRN1-203ENST00000328863 GALNT12Q8IXK2 581 aa13.81□□□□□ -0.2
CLRN1-203ENST00000328863 KIRREL3Q8IZU9 778 aa13.81□□□□□ -0.2
CLRN1-203ENST00000328863 OR4K14Q8NGD5 310 aa13.81□□□□□ -0.2
CLRN1-203ENST00000328863 OR8K3Q8NH51 312 aa13.81□□□□□ -0.2
CLRN1-203ENST00000328863 FAM76AQ8TAV0 307 aa13.81□□□□□ -0.2
CLRN1-203ENST00000328863 PTPMT1Q8WUK0 201 aaPredicted RBP13.81□□□□□ -0.2
CLRN1-203ENST00000328863 TWIST2Q8WVJ9 160 aa13.81□□□□□ -0.2
CLRN1-203ENST00000328863 MIB2Q96AX9 1013 aa13.81□□□□□ -0.2
CLRN1-203ENST00000328863 KLHL29Q96CT2 875 aa13.81□□□□□ -0.2
CLRN1-203ENST00000328863 METTL2AQ96IZ6 378 aaKnown RBP13.81□□□□□ -0.2
CLRN1-203ENST00000328863 PKNOX2Q96KN3 472 aa13.81□□□□□ -0.2
CLRN1-203ENST00000328863 C5orf34Q96MH7 638 aa13.81□□□□□ -0.2
CLRN1-203ENST00000328863 CNPPD1Q9BV87 410 aa13.81□□□□□ -0.2
CLRN1-203ENST00000328863 CDCP1Q9H5V8 836 aa13.81□□□□□ -0.2
CLRN1-203ENST00000328863 AGPAT4Q9NRZ5 378 aa13.81□□□□□ -0.2
CLRN1-203ENST00000328863 GIMAP4Q9NUV9 329 aa13.81□□□□□ -0.2
CLRN1-203ENST00000328863 SIRT5Q9NXA8 310 aa13.81□□□□□ -0.2
CLRN1-203ENST00000328863 PLA2G3Q9NZ20 509 aa13.81□□□□□ -0.2
CLRN1-203ENST00000328863 ZNF223Q9UK11 482 aaPredicted RBP13.81□□□□□ -0.2
CLRN1-203ENST00000328863 PSME2Q9UL46 239 aa13.81□□□□□ -0.2
CLRN1-203ENST00000328863 ENTPD4Q9Y227 616 aa13.81□□□□□ -0.2
CLRN1-203ENST00000328863 ASH1LQ9NR48 2969 aaKnown RBP13.8□□□□□ -0.2
CLRN1-203ENST00000328863 MYOCOSA0A1B0GUC4 107 aa13.8□□□□□ -0.2
CLRN1-203ENST00000328863 TMEM114B3SHH9 223 aa13.8□□□□□ -0.2
CLRN1-203ENST00000328863 PRAMEF2O60811 474 aa13.8□□□□□ -0.2
CLRN1-203ENST00000328863 SNUPNO95149 360 aaKnown RBP13.8□□□□□ -0.2
CLRN1-203ENST00000328863 DDAH2O95865 285 aa13.8□□□□□ -0.2
CLRN1-203ENST00000328863 SERPINE1P05121 402 aa13.8□□□□□ -0.2
CLRN1-203ENST00000328863 IL3P08700 152 aa13.8□□□□□ -0.2
CLRN1-203ENST00000328863 SLC35E2P0CK97 266 aa13.8□□□□□ -0.2
CLRN1-203ENST00000328863 CD46P15529 392 aa13.8□□□□□ -0.2
CLRN1-203ENST00000328863 PRPH2P23942 346 aa13.8□□□□□ -0.2
CLRN1-203ENST00000328863 SERPINB3P29508 390 aa13.8□□□□□ -0.2
CLRN1-203ENST00000328863 MLF1P58340 268 aa13.8□□□□□ -0.2
CLRN1-203ENST00000328863 ERVK-8P63133 956 aa13.8□□□□□ -0.2
CLRN1-203ENST00000328863 FOXK1P85037 733 aa13.8□□□□□ -0.2
CLRN1-203ENST00000328863 BTKQ06187 659 aa13.8□□□□□ -0.2
CLRN1-203ENST00000328863 TUBA3CQ13748 450 aa13.8□□□□□ -0.2
CLRN1-203ENST00000328863 OR1C1Q15619 314 aa13.8□□□□□ -0.2
CLRN1-203ENST00000328863 PRR30Q53SZ7 412 aaPredicted RBP13.8□□□□□ -0.2
CLRN1-203ENST00000328863 RPUSD3Q6P087 351 aaKnown RBP13.8□□□□□ -0.2
CLRN1-203ENST00000328863 TUBA3EQ6PEY2 450 aa13.8□□□□□ -0.2
CLRN1-203ENST00000328863 RNF111Q6ZNA4 994 aa13.8□□□□□ -0.2
CLRN1-203ENST00000328863 DDIASQ8IXT1 998 aa13.8□□□□□ -0.2
CLRN1-203ENST00000328863 SAMD14Q8IZD0 417 aaPredicted RBP13.8□□□□□ -0.2
CLRN1-203ENST00000328863 CLYBLQ8N0X4 340 aa13.8□□□□□ -0.2
CLRN1-203ENST00000328863 ARMC10Q8N2F6 343 aa13.8□□□□□ -0.2
CLRN1-203ENST00000328863 AMER2Q8N7J2 671 aa13.8□□□□□ -0.2
CLRN1-203ENST00000328863 TMEM178AQ8NBL3 297 aa13.8□□□□□ -0.2
CLRN1-203ENST00000328863 FAM98AQ8NCA5 519 aaKnown RBP13.8□□□□□ -0.2
CLRN1-203ENST00000328863 OR5L2Q8NGL0 311 aa13.8□□□□□ -0.2
CLRN1-203ENST00000328863 CDC26Q8NHZ8 85 aa13.8□□□□□ -0.2
CLRN1-203ENST00000328863 AGR3Q8TD06 166 aa13.8□□□□□ -0.2
CLRN1-203ENST00000328863 THAP3Q8WTV1 239 aaPredicted RBP13.8□□□□□ -0.2
CLRN1-203ENST00000328863 RIT1Q92963 219 aa13.8□□□□□ -0.2
CLRN1-203ENST00000328863 NPAS2Q99743 824 aa13.8□□□□□ -0.2
CLRN1-203ENST00000328863 TNFRSF12AQ9NP84 129 aa13.8□□□□□ -0.2
CLRN1-203ENST00000328863 MIEF1Q9NQG6 463 aa13.8□□□□□ -0.2
CLRN1-203ENST00000328863 UTS2RQ9UKP6 389 aa13.8□□□□□ -0.2
CLRN1-203ENST00000328863 ERVK-19Q9WJR5 959 aa13.8□□□□□ -0.2
CLRN1-203ENST00000328863 POLR3HQ9Y535 204 aaPredicted RBP13.8□□□□□ -0.2
CLRN1-203ENST00000328863 ZNF780BQ9Y6R6 833 aa13.8□□□□□ -0.2
CLRN1-203ENST00000328863 SHANK1Q9Y566 2161 aa13.8□□□□□ -0.2
CLRN1-203ENST00000328863 NPIPB8E9PQR5 432 aa13.79□□□□□ -0.2
CLRN1-203ENST00000328863 VPS4BO75351 444 aa13.79□□□□□ -0.2
CLRN1-203ENST00000328863 ITGA10O75578 1167 aa13.79□□□□□ -0.2
CLRN1-203ENST00000328863 ERAL1O75616 437 aaKnown RBP13.79□□□□□ -0.2
CLRN1-203ENST00000328863 HSPA4LO95757 839 aa13.79□□□□□ -0.2
CLRN1-203ENST00000328863 ANXA4P09525 319 aaPredicted RBP13.79□□□□□ -0.2
CLRN1-203ENST00000328863 DHRS4L1P0CG22 281 aa13.79□□□□□ -0.2
CLRN1-203ENST00000328863 CPMP14384 443 aa13.79□□□□□ -0.2
CLRN1-203ENST00000328863 DRD2P14416 443 aa13.79□□□□□ -0.2
CLRN1-203ENST00000328863 NT5EP21589 574 aa13.79□□□□□ -0.2
CLRN1-203ENST00000328863 CYB561P49447 251 aa13.79□□□□□ -0.2
CLRN1-203ENST00000328863 SSR4P51571 173 aa13.79□□□□□ -0.2
CLRN1-203ENST00000328863 GPR143P51810 404 aa13.79□□□□□ -0.2
CLRN1-203ENST00000328863 RPL38P63173 70 aaKnown RBP13.79□□□□□ -0.2
CLRN1-203ENST00000328863 RAE1P78406 368 aaKnown RBP13.79□□□□□ -0.2
CLRN1-203ENST00000328863 CHI3L2Q15782 390 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms