RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 KIAA0040Q15053 153 aa4.86□□□□□ -1.63
LRIT3-201ENST00000327908 ZXDCQ2QGD7 858 aaPredicted RBP4.86□□□□□ -1.63
LRIT3-201ENST00000327908 CYP27C1Q4G0S4 372 aa4.86□□□□□ -1.63
LRIT3-201ENST00000327908 PRAMEF9Q5VWM5 478 aa4.86□□□□□ -1.63
LRIT3-201ENST00000327908 MLIPQ5VWP3 458 aa4.86□□□□□ -1.63
LRIT3-201ENST00000327908 FKBP9P1Q75LS8 142 aa4.86□□□□□ -1.63
LRIT3-201ENST00000327908 TMEM151BQ8IW70 566 aa4.86□□□□□ -1.63
LRIT3-201ENST00000327908 ZNF440Q8IYI8 595 aa4.86□□□□□ -1.63
LRIT3-201ENST00000327908 EID3Q8N140 333 aa4.86□□□□□ -1.63
LRIT3-201ENST00000327908 KCT2Q8NC54 265 aa4.86□□□□□ -1.63
LRIT3-201ENST00000327908 TOR1AIP2Q8NFQ8 470 aa4.86□□□□□ -1.63
LRIT3-201ENST00000327908 SUN3Q8TAQ9 357 aa4.86□□□□□ -1.63
LRIT3-201ENST00000327908 MIPOL1Q8TD10 442 aa4.86□□□□□ -1.63
LRIT3-201ENST00000327908 APIPQ96GX9 242 aa4.86□□□□□ -1.63
LRIT3-201ENST00000327908 CDK15Q96Q40 435 aa4.86□□□□□ -1.63
LRIT3-201ENST00000327908 PHF12Q96QT6 1004 aa4.86□□□□□ -1.63
LRIT3-201ENST00000327908 G6PC3Q9BUM1 346 aa4.86□□□□□ -1.63
LRIT3-201ENST00000327908 SCNM1Q9BWG6 230 aa4.86□□□□□ -1.63
LRIT3-201ENST00000327908 FBXW2Q9UKT8 454 aa4.86□□□□□ -1.63
LRIT3-201ENST00000327908 ASB1Q9Y576 335 aa4.86□□□□□ -1.63
LRIT3-201ENST00000327908 A0A1W2PP18 115 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 IDSB3KWA1 339 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 SGK494L7N484 410 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 MYF5P13349 255 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 XKP51811 444 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 HPCAP84074 193 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 HMGCS1Q01581 520 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 RCAN2Q14206 197 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 KCNAB1Q14722 419 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 MAPKAPK3Q16644 382 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 KCTD19Q17RG1 926 aaPredicted RBP4.85□□□□□ -1.63
LRIT3-201ENST00000327908 VWA5B1Q5TIE3 1220 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 TMEM81Q6P7N7 255 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 UNQ6494/PRO21346Q6UXR6 183 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 UBE3DQ7Z6J8 389 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 AMER3Q8N944 861 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 RCBTB1Q8NDN9 531 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 OR8J3Q8NGG0 315 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.85□□□□□ -1.63
LRIT3-201ENST00000327908 DNAJB14Q8TBM8 379 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 SPDL1Q96EA4 605 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 ELAC2Q9BQ52 826 aaKnown RBP4.85□□□□□ -1.63
LRIT3-201ENST00000327908 SPNS1Q9H2V7 528 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 LANCL2Q9NS86 450 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 SH3BP4Q9P0V3 963 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 TAGLN3Q9UI15 199 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 PRPF19Q9UMS4 504 aaKnown RBP4.85□□□□□ -1.63
LRIT3-201ENST00000327908 ABCG2Q9UNQ0 655 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 PCDHGB6Q9Y5F9 930 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 PCDHGA9Q9Y5G4 932 aaKnown RBP4.85□□□□□ -1.63
LRIT3-201ENST00000327908 COL27A1Q8IZC6 1860 aaPredicted RBP4.85□□□□□ -1.63
LRIT3-201ENST00000327908 A0A087WV48 116 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 TEX51A0A1B0GUA7 166 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 C2orf92A0A1B0GVN3 265 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 H3BNH8 94 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 DPM1O60762 260 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 ALOX5P09917 674 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 KITP10721 976 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 UQCRBP14927 111 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 NT5EP21589 574 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 CALB2P22676 271 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 ETV5P41161 510 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 ALDH9A1P49189 494 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 HNRNPH2P55795 449 aaKnown RBP4.85□□□□□ -1.63
LRIT3-201ENST00000327908 ART3Q13508 389 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 RUNX2Q13950 521 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 SF3B4Q15427 424 aaKnown RBP eCLIP4.85□□□□□ -1.63
LRIT3-201ENST00000327908 NSDHLQ15738 373 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 MEP1AQ16819 746 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 MINDY4Q4G0A6 757 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 SCIMPQ6UWF3 145 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 CCDC81Q6ZN84 652 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 COX15Q7KZN9 410 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 ANKRD37Q7Z713 158 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 PLD3Q8IV08 490 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 ARMC10Q8N2F6 343 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 VWA5B2Q8N398 1253 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 B3GNT7Q8NFL0 401 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 BCAS4Q8TDM0 211 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 ZCCHC14Q8WYQ9 949 aaKnown RBP4.85□□□□□ -1.63
LRIT3-201ENST00000327908 GATA6Q92908 595 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 MTFMTQ96DP5 389 aaKnown RBP4.85□□□□□ -1.63
LRIT3-201ENST00000327908 PEX11GQ96HA9 241 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 MAPKAP1Q9BPZ7 522 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 ALOXE3Q9BYJ1 711 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 LHPPQ9H008 270 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 KLHL25Q9H0H3 589 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 Q9N2J8 555 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 DDX18Q9NVP1 670 aaKnown RBP4.85□□□□□ -1.63
LRIT3-201ENST00000327908 HCN3Q9P1Z3 774 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 MKL2Q9ULH7 1088 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 C19orf53Q9UNZ5 99 aaPredicted RBP4.85□□□□□ -1.63
LRIT3-201ENST00000327908 PRORSD1PA6NEY8 169 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 MKRN2OSH3BPM6 223 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 EBAG9O00559 213 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 ZNF195O14628 629 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 TERTO14746 1132 aaKnown RBP4.85□□□□□ -1.63
LRIT3-201ENST00000327908 TSPAN8P19075 237 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 IFNA8P32881 189 aa4.85□□□□□ -1.63
LRIT3-201ENST00000327908 NEK2P51955 445 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms