RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 SLC52A3Q9NQ40 469 aa12.16□□□□□ -0.46
DNMT3A-202ENST00000321117 CCL16O15467 120 aa12.15□□□□□ -0.46
DNMT3A-202ENST00000321117 ADAM12O43184 909 aa12.15□□□□□ -0.46
DNMT3A-202ENST00000321117 HCN1O60741 890 aa12.15□□□□□ -0.46
DNMT3A-202ENST00000321117 KHDRBS3O75525 346 aaKnown RBP12.15□□□□□ -0.46
DNMT3A-202ENST00000321117 CYBAP13498 195 aa12.15□□□□□ -0.46
DNMT3A-202ENST00000321117 STOMP27105 288 aa12.15□□□□□ -0.46
DNMT3A-202ENST00000321117 RPS5P46782 204 aaKnown RBP12.15□□□□□ -0.46
DNMT3A-202ENST00000321117 ST3GAL3Q11203 375 aa12.15□□□□□ -0.46
DNMT3A-202ENST00000321117 UNC5DQ6UXZ4 953 aa12.15□□□□□ -0.46
DNMT3A-202ENST00000321117 TIGD4Q8IY51 512 aa12.15□□□□□ -0.46
DNMT3A-202ENST00000321117 GHDCQ8N2G8 530 aa12.15□□□□□ -0.46
DNMT3A-202ENST00000321117 SYNPOQ8N3V7 929 aa12.15□□□□□ -0.46
DNMT3A-202ENST00000321117 SMPDL3AQ92484 453 aa12.15□□□□□ -0.46
DNMT3A-202ENST00000321117 PCBD2Q9H0N5 130 aa12.15□□□□□ -0.46
DNMT3A-202ENST00000321117 DPAGT1Q9H3H5 408 aa12.15□□□□□ -0.46
DNMT3A-202ENST00000321117 EIF3KQ9UBQ5 218 aaKnown RBP12.15□□□□□ -0.46
DNMT3A-202ENST00000321117 PCDHGA3Q9Y5H0 932 aa12.15□□□□□ -0.46
DNMT3A-202ENST00000321117 PCDHGA2Q9Y5H1 932 aa12.15□□□□□ -0.46
DNMT3A-202ENST00000321117 TRAV6A0A075B6T7 132 aa12.15□□□□□ -0.46
DNMT3A-202ENST00000321117 ZSCAN5BA6NJL1 495 aa12.15□□□□□ -0.46
DNMT3A-202ENST00000321117 LEFTY1O75610 366 aa12.15□□□□□ -0.46
DNMT3A-202ENST00000321117 GASTP01350 101 aa12.15□□□□□ -0.46
DNMT3A-202ENST00000321117 TLX1P31314 330 aaPredicted RBP12.15□□□□□ -0.46
DNMT3A-202ENST00000321117 MTNR1AP48039 350 aa12.15□□□□□ -0.46
DNMT3A-202ENST00000321117 SLC14A1Q13336 389 aa12.15□□□□□ -0.46
DNMT3A-202ENST00000321117 PIN1Q13526 163 aaPredicted RBP12.15□□□□□ -0.46
DNMT3A-202ENST00000321117 AMZ2Q86W34 360 aa12.15□□□□□ -0.46
DNMT3A-202ENST00000321117 CADM2Q8N3J6 435 aa12.15□□□□□ -0.46
DNMT3A-202ENST00000321117 TRMT61BQ9BVS5 477 aaKnown RBP12.15□□□□□ -0.46
DNMT3A-202ENST00000321117 CWH43Q9H720 699 aa12.15□□□□□ -0.46
DNMT3A-202ENST00000321117 PLAGL1Q9UM63 463 aa12.15□□□□□ -0.46
DNMT3A-202ENST00000321117 LYRM1O43325 122 aa12.15□□□□□ -0.46
DNMT3A-202ENST00000321117 C8AP07357 584 aa12.15□□□□□ -0.46
DNMT3A-202ENST00000321117 ACADMP11310 421 aa12.15□□□□□ -0.46
DNMT3A-202ENST00000321117 SLC9A5Q14940 896 aa12.15□□□□□ -0.46
DNMT3A-202ENST00000321117 PRSS36Q5K4E3 855 aa12.15□□□□□ -0.46
DNMT3A-202ENST00000321117 CNIH2Q6PI25 160 aa12.15□□□□□ -0.46
DNMT3A-202ENST00000321117 RFLNAQ6ZTI6 216 aa12.15□□□□□ -0.46
DNMT3A-202ENST00000321117 PTOV1Q86YD1 416 aa12.15□□□□□ -0.46
DNMT3A-202ENST00000321117 TOMM5Q8N4H5 51 aa12.15□□□□□ -0.46
DNMT3A-202ENST00000321117 ARMC5Q96C12 935 aa12.15□□□□□ -0.46
DNMT3A-202ENST00000321117 SMG9Q9H0W8 520 aaKnown RBP12.15□□□□□ -0.46
DNMT3A-202ENST00000321117 AKAP7Q9P0M2 348 aaPredicted RBP12.15□□□□□ -0.46
DNMT3A-202ENST00000321117 CFAP20Q9Y6A4 193 aaKnown RBP12.15□□□□□ -0.46
DNMT3A-202ENST00000321117 DNMT3AQ9Y6K1 912 aaPredicted RBP12.15□□□□□ -0.46
DNMT3A-202ENST00000321117 SLC35F4A4IF30 521 aa12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 RIIAD1A6NNX1 92 aa12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 PLD2O14939 933 aa12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 SCG5P05408 212 aa12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 KCNJ10P78508 379 aa12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 MLLT11Q13015 90 aaPredicted RBP12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 COX20Q5RI15 118 aa12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 NXPE4Q6UWF7 544 aa12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 SHFQ7M4L6 423 aa12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 VRK3Q8IV63 474 aa12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 YAF2Q8IY57 180 aa12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 SIMC1Q8NDZ2 872 aa12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 POF1BQ8WVV4 589 aa12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 TFGQ92734 400 aaPredicted RBP12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 ABCG5Q9H222 651 aa12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 ELAC1Q9H777 363 aaKnown RBP12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 HCSTQ9UBK5 93 aa12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 IL36AQ9UHA7 158 aa12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 ZFR2Q9UPR6 939 aaKnown RBP12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 UBE2QL1A1L167 161 aa12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 CPSF4LA6NMK7 179 aaKnown RBP12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 C1QTNF3-AMACRE9PGA6 284 aa12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 CXCL14O95715 111 aa12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 IL1AP01583 271 aa12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 ARAFP10398 606 aa12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 MGAT3Q09327 533 aa12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 SGCGQ13326 291 aa12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 GAB1Q13480 694 aa12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 TRAM2Q15035 370 aa12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 TAS1R1Q7RTX1 841 aa12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 FAM20CQ8IXL6 584 aa12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 CHST14Q8NCH0 376 aa12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 SRFBP1Q8NEF9 429 aaKnown RBP12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 IGSF21Q96ID5 467 aa12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 MAT2BQ9NZL9 334 aa12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 GTF2A1LQ9UNN4 478 aa12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 PRELID1Q9Y255 219 aa12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 GPR52Q9Y2T5 361 aa12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 BACE2Q9Y5Z0 518 aa12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 TBC1D3BA6NDS4 549 aa12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 H0YIV9 168 aa12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 WWP2O00308 870 aa12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 IFNA7P01567 189 aa12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 IFNGP01579 166 aa12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 SPNP16150 400 aa12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 LAG3P18627 525 aa12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 PPM1AP35813 382 aa12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 CAP1Q01518 475 aa12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 IFITM3Q01628 133 aa12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 ELOAQ14241 798 aaKnown RBP12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 CDK10Q15131 360 aa12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 ZNF767PQ75MW2 155 aa12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 CELF5Q8N6W0 485 aaKnown RBP12.14□□□□□ -0.47
DNMT3A-202ENST00000321117 ZNF433Q8N7K0 673 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms