RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 HEATR5BQ9P2D3 2071 aa7.17□□□□□ -1.26
IFT88-201ENST00000319980 ZW10O43264 779 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 APBB3O95704 486 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 CCDC159P0C7I6 412 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 OR12D1P0DN82 309 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 F3P13726 295 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 POU2F1P14859 743 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 MAGP20916 626 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 GSTM2P28161 218 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 FEN1P39748 380 aaKnown RBP7.16□□□□□ -1.26
IFT88-201ENST00000319980 TOP3AQ13472 1001 aaPredicted RBP7.16□□□□□ -1.26
IFT88-201ENST00000319980 CCINQ13939 588 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 PUM1Q14671 1186 aaKnown RBP eCLIP7.16□□□□□ -1.26
IFT88-201ENST00000319980 COL19A1Q14993 1142 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 SMN1Q16637 294 aaKnown RBP7.16□□□□□ -1.26
IFT88-201ENST00000319980 EXOC3L2Q2M3D2 409 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 ALG11Q2TAA5 492 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 B3GNT8Q7Z7M8 397 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 TRIM73Q86UV7 250 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 CCDC71Q8IV32 467 aaPredicted RBP7.16□□□□□ -1.26
IFT88-201ENST00000319980 ALDH16A1Q8IZ83 802 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 OR10G6Q8NH81 332 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 PATE1Q8WXA2 126 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 NIPSNAP1Q9BPW8 284 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 TUBA1CQ9BQE3 449 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 YIPF4Q9BSR8 244 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 DGCR6LQ9BY27 220 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 LHPPQ9H008 270 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 KLHL25Q9H0H3 589 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 THSD1Q9NS62 852 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 EHD3Q9NZN3 535 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 TRPC4Q9UBN4 977 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 APOBEC3BQ9UH17 382 aaKnown RBP7.16□□□□□ -1.26
IFT88-201ENST00000319980 SNX5Q9Y5X3 404 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 MTCH2Q9Y6C9 303 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 TRIOBPQ9H2D6 2365 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 A0A1W2PS29 197 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 H3BMQ9 156 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 TMX2-CTNND1H3BSU7 103 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 PCDH17O14917 1159 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 SLC28A2O43868 658 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 ATE1O95260 518 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 SEMA4FO95754 770 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 AIFM1O95831 613 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 IFNW1P05000 195 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 NTSP30990 170 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 AKT2P31751 481 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 XCR1P46094 333 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 RPS6KA3P51812 740 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 BTN3A2P78410 334 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 DYNC1I2Q13409 638 aaKnown RBP7.16□□□□□ -1.26
IFT88-201ENST00000319980 GPR19Q15760 415 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 MICAQ29983 383 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 ZNF542PQ5EBM4 170 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 SLC30A8Q8IWU4 369 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 LGI4Q8N135 537 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 SRFBP1Q8NEF9 429 aaKnown RBP7.16□□□□□ -1.26
IFT88-201ENST00000319980 OR13H1Q8NG92 308 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 OR9Q2Q8NGE9 314 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 OR13F1Q8NGS4 319 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 PHF10Q8WUB8 498 aaKnown RBP7.16□□□□□ -1.26
IFT88-201ENST00000319980 FBLIM1Q8WUP2 373 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 FAM3CQ92520 227 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 CNRIP1Q96F85 164 aaPredicted RBP7.16□□□□□ -1.26
IFT88-201ENST00000319980 ZNF764Q96H86 408 aaPredicted RBP7.16□□□□□ -1.26
IFT88-201ENST00000319980 COG8Q96MW5 612 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 PIP5K1AQ99755 562 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 SARGQ9BW04 601 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 OR51I1Q9H343 314 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 SERHL2Q9H4I8 314 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 C6orf106Q9H6K1 298 aaPredicted RBP7.16□□□□□ -1.26
IFT88-201ENST00000319980 A4GALTQ9NPC4 353 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 ACER3Q9NUN7 267 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 WARS2Q9UGM6 360 aaKnown RBP7.16□□□□□ -1.26
IFT88-201ENST00000319980 KLF15Q9UIH9 416 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 PCOLCE2Q9UKZ9 415 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 MMP17Q9ULZ9 603 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 GSAPA4D1B5 854 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 TMEM247A6NEH6 219 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 ZNF701M0R085 212 aaPredicted RBP7.16□□□□□ -1.26
IFT88-201ENST00000319980 PCDHGA12O60330 932 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 GUCY1B2O75343 617 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 MFN2O95140 757 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 GADD45GO95257 159 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 POLR2CP19387 275 aaPredicted RBP7.16□□□□□ -1.26
IFT88-201ENST00000319980 DCKP27707 260 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 GABARAPL2P60520 117 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 STXBP1P61764 594 aaKnown RBP7.16□□□□□ -1.26
IFT88-201ENST00000319980 ILF3Q12906 894 aaKnown RBP eCLIP7.16□□□□□ -1.26
IFT88-201ENST00000319980 MLC1Q15049 377 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 MAPK11Q15759 364 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 SYPL1Q16563 259 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 FBXO43Q4G163 708 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 PRRT3Q5FWE3 981 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 LAIR1Q6GTX8 287 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 MRM1Q6IN84 353 aaKnown RBP7.16□□□□□ -1.26
IFT88-201ENST00000319980 Q6ZS52 159 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 OLIG3Q7RTU3 272 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 SFTPA2Q8IWL1 248 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 TRIM48Q8IWZ4 208 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms