RNA–Protein interactions for RNA: ENST00000318801.8

SYNGR1-202, Transcript of synaptogyrin 1, humanhuman

TSL 1 (best) BASIC

Gene SYNGR1, Length 1,361 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-202ENST00000318801 DNAJB13P59910 316 aa27.12■■□□□ 1.93
SYNGR1-202ENST00000318801 ZNF324BQ6AW86 544 aaPredicted RBP27.12■■□□□ 1.93
SYNGR1-202ENST00000318801 GALNTL5Q7Z4T8 443 aa27.12■■□□□ 1.93
SYNGR1-202ENST00000318801 CYP4Z2PQ8N1L4 340 aa27.12■■□□□ 1.93
SYNGR1-202ENST00000318801 ASB15Q8WXK1 588 aa27.12■■□□□ 1.93
SYNGR1-202ENST00000318801 RIT1Q92963 219 aa27.12■■□□□ 1.93
SYNGR1-202ENST00000318801 CAVIN3Q969G5 261 aa27.12■■□□□ 1.93
SYNGR1-202ENST00000318801 PPWD1Q96BP3 646 aaKnown RBP27.12■■□□□ 1.93
SYNGR1-202ENST00000318801 ZNF223Q9UK11 482 aaPredicted RBP27.12■■□□□ 1.93
SYNGR1-202ENST00000318801 KLF13Q9Y2Y9 288 aaPredicted RBP27.12■■□□□ 1.93
SYNGR1-202ENST00000318801 PTPN13Q12923 2485 aa27.12■■□□□ 1.93
SYNGR1-202ENST00000318801 KLRC4-KLRK1H3BQV0 150 aa27.11■■□□□ 1.93
SYNGR1-202ENST00000318801 TUBBP07437 444 aa27.11■■□□□ 1.93
SYNGR1-202ENST00000318801 SLC35E2P0CK97 266 aa27.11■■□□□ 1.93
SYNGR1-202ENST00000318801 DEKP35659 375 aaKnown RBP27.11■■□□□ 1.93
SYNGR1-202ENST00000318801 NAGLUP54802 743 aa27.11■■□□□ 1.93
SYNGR1-202ENST00000318801 RNF4P78317 190 aa27.11■■□□□ 1.93
SYNGR1-202ENST00000318801 SLC18A2Q05940 514 aa27.11■■□□□ 1.93
SYNGR1-202ENST00000318801 ASPHQ12797 758 aa27.11■■□□□ 1.93
SYNGR1-202ENST00000318801 NDUFAF5Q5TEU4 345 aa27.11■■□□□ 1.93
SYNGR1-202ENST00000318801 C6orf163Q5TEZ5 329 aa27.11■■□□□ 1.93
SYNGR1-202ENST00000318801 ZNF468Q5VIY5 522 aaPredicted RBP27.11■■□□□ 1.93
SYNGR1-202ENST00000318801 C4orf33Q8N1A6 199 aa27.11■■□□□ 1.93
SYNGR1-202ENST00000318801 OR4K14Q8NGD5 310 aa27.11■■□□□ 1.93
SYNGR1-202ENST00000318801 OR2W6PQ8NHA6 318 aa27.11■■□□□ 1.93
SYNGR1-202ENST00000318801 FBXL20Q96IG2 436 aa27.11■■□□□ 1.93
SYNGR1-202ENST00000318801 FAIM2Q9BWQ8 316 aa27.11■■□□□ 1.93
SYNGR1-202ENST00000318801 TIMMDC1Q9NPL8 285 aa27.11■■□□□ 1.93
SYNGR1-202ENST00000318801 NOL12Q9UGY1 213 aaKnown RBP eCLIP27.11■■□□□ 1.93
SYNGR1-202ENST00000318801 V9GYY5 206 aaPredicted RBP27.11■■□□□ 1.93
SYNGR1-202ENST00000318801 HECTD1Q9ULT8 2610 aa27.11■■□□□ 1.93
SYNGR1-202ENST00000318801 A8MVJ9 347 aa27.1■■□□□ 1.93
SYNGR1-202ENST00000318801 PRKRAO75569 313 aaKnown RBP27.1■■□□□ 1.93
SYNGR1-202ENST00000318801 OR2J2O76002 312 aa27.1■■□□□ 1.93
SYNGR1-202ENST00000318801 GALNSP34059 522 aa27.1■■□□□ 1.93
SYNGR1-202ENST00000318801 RBPJQ06330 500 aa27.1■■□□□ 1.93
SYNGR1-202ENST00000318801 GFRALQ6UXV0 394 aa27.1■■□□□ 1.93
SYNGR1-202ENST00000318801 GSTO2Q9H4Y5 243 aa27.1■■□□□ 1.93
SYNGR1-202ENST00000318801 OXSMQ9NWU1 459 aa27.1■■□□□ 1.93
SYNGR1-202ENST00000318801 HPF1Q9NWY4 346 aa27.1■■□□□ 1.93
SYNGR1-202ENST00000318801 SEC14L3Q9UDX4 400 aa27.1■■□□□ 1.93
SYNGR1-202ENST00000318801 SLC5A6Q9Y289 635 aa27.1■■□□□ 1.93
SYNGR1-202ENST00000318801 C1orf226A1L170 272 aa27.09■■□□□ 1.93
SYNGR1-202ENST00000318801 NME2P1O60361 137 aa27.09■■□□□ 1.93
SYNGR1-202ENST00000318801 NME2P22392 152 aa27.09■■□□□ 1.93
SYNGR1-202ENST00000318801 TRA2BP62995 288 aaKnown RBP27.09■■□□□ 1.93
SYNGR1-202ENST00000318801 ALDH6A1Q02252 535 aaKnown RBP27.09■■□□□ 1.93
SYNGR1-202ENST00000318801 SRSF1Q07955 248 aaKnown RBP eCLIP27.09■■□□□ 1.93
SYNGR1-202ENST00000318801 ERCC6LQ2NKX8 1250 aa27.09■■□□□ 1.93
SYNGR1-202ENST00000318801 HOMEZQ8IX15 550 aa27.09■■□□□ 1.93
SYNGR1-202ENST00000318801 ZNF721Q8TF20 911 aa27.09■■□□□ 1.93
SYNGR1-202ENST00000318801 SSC4DQ8WTU2 575 aa27.09■■□□□ 1.93
SYNGR1-202ENST00000318801 HBEGFQ99075 208 aa27.09■■□□□ 1.93
SYNGR1-202ENST00000318801 CNPPD1Q9BV87 410 aa27.09■■□□□ 1.93
SYNGR1-202ENST00000318801 RYDENQ9NUL5 291 aaKnown RBP27.09■■□□□ 1.93
SYNGR1-202ENST00000318801 OSGIN2Q9Y236 505 aa27.09■■□□□ 1.93
SYNGR1-202ENST00000318801 GOLGA6L10A6NI86 522 aa27.09■■□□□ 1.93
SYNGR1-202ENST00000318801 WWP2O00308 870 aa27.09■■□□□ 1.93
SYNGR1-202ENST00000318801 PGRMC2O15173 223 aa27.09■■□□□ 1.93
SYNGR1-202ENST00000318801 ACSM2AQ08AH3 577 aa27.09■■□□□ 1.93
SYNGR1-202ENST00000318801 TBL3Q12788 808 aaKnown RBP27.09■■□□□ 1.93
SYNGR1-202ENST00000318801 ZNF267Q14586 743 aaPredicted RBP27.09■■□□□ 1.93
SYNGR1-202ENST00000318801 KRTCAP3Q53RY4 240 aa27.09■■□□□ 1.93
SYNGR1-202ENST00000318801 SPIN4Q56A73 249 aa27.09■■□□□ 1.93
SYNGR1-202ENST00000318801 LIPMQ5VYY2 423 aa27.09■■□□□ 1.93
SYNGR1-202ENST00000318801 ACSM2BQ68CK6 577 aa27.09■■□□□ 1.93
SYNGR1-202ENST00000318801 OPN5Q6U736 354 aa27.09■■□□□ 1.93
SYNGR1-202ENST00000318801 SLC29A4Q7RTT9 530 aa27.09■■□□□ 1.93
SYNGR1-202ENST00000318801 PNPLA5Q7Z6Z6 429 aaPredicted RBP27.09■■□□□ 1.93
SYNGR1-202ENST00000318801 C1orf52Q8N6N3 182 aaKnown RBP27.09■■□□□ 1.93
SYNGR1-202ENST00000318801 POGLUT1Q8NBL1 392 aa27.09■■□□□ 1.93
SYNGR1-202ENST00000318801 AGAP11Q8TF27 550 aa27.09■■□□□ 1.93
SYNGR1-202ENST00000318801 HES7Q9BYE0 225 aa27.09■■□□□ 1.93
SYNGR1-202ENST00000318801 TEX10Q9NXF1 929 aaPredicted RBP27.09■■□□□ 1.93
SYNGR1-202ENST00000318801 XKP51811 444 aa27.08■■□□□ 1.93
SYNGR1-202ENST00000318801 HK2P52789 917 aa27.08■■□□□ 1.93
SYNGR1-202ENST00000318801 GALNT1Q10472 559 aaPredicted RBP27.08■■□□□ 1.93
SYNGR1-202ENST00000318801 SPRED3Q2MJR0 410 aa27.08■■□□□ 1.93
SYNGR1-202ENST00000318801 ZNF800Q2TB10 664 aaPredicted RBP eCLIP27.08■■□□□ 1.93
SYNGR1-202ENST00000318801 FRMD7Q6ZUT3 714 aa27.08■■□□□ 1.93
SYNGR1-202ENST00000318801 SREK1Q8WXA9 508 aaKnown RBP27.08■■□□□ 1.93
SYNGR1-202ENST00000318801 APOPT1Q96IL0 206 aa27.08■■□□□ 1.93
SYNGR1-202ENST00000318801 PARD6BQ9BYG5 372 aa27.08■■□□□ 1.93
SYNGR1-202ENST00000318801 LIN28AQ9H9Z2 209 aaKnown RBP27.08■■□□□ 1.93
SYNGR1-202ENST00000318801 LGALS13Q9UHV8 139 aa27.08■■□□□ 1.93
SYNGR1-202ENST00000318801 PLLPQ9Y342 182 aa27.08■■□□□ 1.93
SYNGR1-202ENST00000318801 TIMM22Q9Y584 194 aa27.08■■□□□ 1.93
SYNGR1-202ENST00000318801 SPTBN1Q01082 2364 aaKnown RBP27.07■■□□□ 1.92
SYNGR1-202ENST00000318801 GNG14A0A1W2PPG7 69 aa27.07■■□□□ 1.92
SYNGR1-202ENST00000318801 ASPDHA6ND91 283 aa27.07■■□□□ 1.92
SYNGR1-202ENST00000318801 PRKNO60260 465 aaPredicted RBP27.07■■□□□ 1.92
SYNGR1-202ENST00000318801 SEMA7AO75326 666 aa27.07■■□□□ 1.92
SYNGR1-202ENST00000318801 UNC5CO95185 931 aa27.07■■□□□ 1.92
SYNGR1-202ENST00000318801 PER3P56645 1201 aa27.07■■□□□ 1.92
SYNGR1-202ENST00000318801 PMP22Q01453 160 aa27.07■■□□□ 1.92
SYNGR1-202ENST00000318801 MPEG1Q2M385 716 aa27.07■■□□□ 1.92
SYNGR1-202ENST00000318801 TCHHL1Q5QJ38 904 aaPredicted RBP27.07■■□□□ 1.92
SYNGR1-202ENST00000318801 RNF111Q6ZNA4 994 aa27.07■■□□□ 1.92
SYNGR1-202ENST00000318801 TRABD2AQ86V40 505 aa27.07■■□□□ 1.92
SYNGR1-202ENST00000318801 SRRM1Q8IYB3 904 aaKnown RBP27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms