RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 RING1Q06587 406 aa9.19□□□□□ -0.94
PTPRA-202ENST00000318266 DBPQ10586 325 aaPredicted RBP9.19□□□□□ -0.94
PTPRA-202ENST00000318266 RPA4Q13156 261 aa9.19□□□□□ -0.94
PTPRA-202ENST00000318266 PUM1Q14671 1186 aaKnown RBP eCLIP9.19□□□□□ -0.941e-7■■□□□ 13.4
PTPRA-202ENST00000318266 ZNF628Q5EBL2 1059 aa9.19□□□□□ -0.94
PTPRA-202ENST00000318266 TIGD3Q6B0B8 471 aa9.19□□□□□ -0.94
PTPRA-202ENST00000318266 CXorf57Q6NSI4 855 aaKnown RBP9.19□□□□□ -0.94
PTPRA-202ENST00000318266 ZNF730Q6ZMV8 503 aa9.19□□□□□ -0.94
PTPRA-202ENST00000318266 MACC1Q6ZN28 852 aa9.19□□□□□ -0.94
PTPRA-202ENST00000318266 RNF165Q6ZSG1 346 aa9.19□□□□□ -0.94
PTPRA-202ENST00000318266 PLEKHM3Q6ZWE6 761 aa9.19□□□□□ -0.94
PTPRA-202ENST00000318266 KRT74Q7RTS7 529 aa9.19□□□□□ -0.94
PTPRA-202ENST00000318266 CPA6Q8N4T0 437 aa9.19□□□□□ -0.94
PTPRA-202ENST00000318266 CLDN22Q8N7P3 220 aa9.19□□□□□ -0.94
PTPRA-202ENST00000318266 GALNT11Q8NCW6 608 aa9.19□□□□□ -0.94
PTPRA-202ENST00000318266 ZNF680Q8NEM1 530 aa9.19□□□□□ -0.94
PTPRA-202ENST00000318266 PROKR2Q8NFJ6 384 aa9.19□□□□□ -0.94
PTPRA-202ENST00000318266 OR52I1Q8NGK6 324 aa9.19□□□□□ -0.94
PTPRA-202ENST00000318266 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.19□□□□□ -0.945e-7■■■■■ 65.3
PTPRA-202ENST00000318266 POF1BQ8WVV4 589 aa9.19□□□□□ -0.94
PTPRA-202ENST00000318266 NACC2Q96BF6 587 aa9.19□□□□□ -0.94
PTPRA-202ENST00000318266 HYLS1Q96M11 299 aa9.19□□□□□ -0.94
PTPRA-202ENST00000318266 WFDC6Q9BQY6 131 aa9.19□□□□□ -0.94
PTPRA-202ENST00000318266 SLC28A3Q9HAS3 691 aa9.19□□□□□ -0.94
PTPRA-202ENST00000318266 BEX1Q9HBH7 125 aa9.19□□□□□ -0.94
PTPRA-202ENST00000318266 B3GNT2Q9NY97 397 aa9.19□□□□□ -0.94
PTPRA-202ENST00000318266 ZNF282Q9UDV7 671 aaPredicted RBP9.19□□□□□ -0.94
PTPRA-202ENST00000318266 RABL2BQ9UNT1 228 aa9.19□□□□□ -0.94
PTPRA-202ENST00000318266 SLC45A1Q9Y2W3 748 aa9.19□□□□□ -0.94
PTPRA-202ENST00000318266 NLRC5Q86WI3 1866 aa9.19□□□□□ -0.94
PTPRA-202ENST00000318266 DVL2O14641 736 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 PDPK1O15530 556 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 OSMP13725 252 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 PTX3P26022 381 aaPredicted RBP9.18□□□□□ -0.94
PTPRA-202ENST00000318266 STK19P49842 368 aaPredicted RBP9.18□□□□□ -0.94
PTPRA-202ENST00000318266 CLDN20P56880 219 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 PFN3P60673 137 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 RPS13P62277 151 aaKnown RBP9.18□□□□□ -0.94
PTPRA-202ENST00000318266 B4GALNT1Q00973 533 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 CCSMST1Q4G0I0 132 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 RSPO2Q6UXX9 243 aaPredicted RBP9.18□□□□□ -0.94
PTPRA-202ENST00000318266 OLIG3Q7RTU3 272 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 SZRD1Q7Z422 152 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 SLC30A8Q8IWU4 369 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 RAB8BQ92930 207 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 C1QTNF7Q9BXJ2 289 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 MED28Q9H204 178 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 HCSTQ9UBK5 93 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 CORO2BQ9UQ03 480 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 DOCK3Q8IZD9 2030 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 A0A0A6YYJ9 748 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 A0A1B0GVM2 712 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 NPIPB15A6NHN6 443 aaPredicted RBP9.18□□□□□ -0.94
PTPRA-202ENST00000318266 CD8B2A6NJW9 211 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 SLC30A4O14863 429 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 TBL1XO60907 577 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 BCHEP06276 602 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 CD8BP10966 210 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 PIPP12273 146 aaPredicted RBP9.18□□□□□ -0.94
PTPRA-202ENST00000318266 PPIBP23284 216 aaKnown RBP9.18□□□□□ -0.94
PTPRA-202ENST00000318266 SPAM1P38567 509 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 SLC6A12P48065 614 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 ALDH9A1P49189 494 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 SMSP52788 366 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 PER3P56645 1201 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 TEKQ02763 1124 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 MGAT3Q09327 533 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 GGTA1PQ4G0N0 100 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 CCSAPQ6IQ19 270 aaPredicted RBP9.18□□□□□ -0.94
PTPRA-202ENST00000318266 TEX261Q6UWH6 196 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 HSDL2Q6YN16 418 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 SLC51BQ86UW2 128 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 COMMD7Q86VX2 200 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 SLAIN1Q8ND83 568 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 OR11H4Q8NGC9 324 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 WFDC5Q8TCV5 224 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 AP3S1Q92572 193 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 FUBP3Q96I24 572 aaKnown RBP eCLIP9.18□□□□□ -0.942e-19■■■□□ 15.3
PTPRA-202ENST00000318266 PPP1R3EQ9H7J1 279 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 THSD1Q9NS62 852 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 REV1Q9UBZ9 1251 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 CLEC4AQ9UMR7 237 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 EXO1Q9UQ84 846 aaKnown RBP9.18□□□□□ -0.94
PTPRA-202ENST00000318266 U3KQ87 197 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 LOC105369274A0A096LPK9 316 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 SHISA3A0PJX4 238 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 OR2AG2A6NM03 316 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 LANCL1O43813 399 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 FZD6O60353 706 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 SEMA7AO75326 666 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 RFPL3O75679 317 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 RECKO95980 971 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 TGFB1P01137 390 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 NR2F6P10588 404 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 RHCEP18577 417 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 NNMTP40261 264 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 NSG1P42857 185 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 ZNF81P51508 661 aa9.18□□□□□ -0.94
PTPRA-202ENST00000318266 MEF2AQ02078 507 aaPredicted RBP9.18□□□□□ -0.94
PTPRA-202ENST00000318266 PIN1Q13526 163 aaPredicted RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms