RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 SLC2A5P22732 501 aa12.89□□□□□ -0.35
TRIM56-201ENST00000306085 COL20A1Q9P218 1284 aa12.89□□□□□ -0.35
TRIM56-201ENST00000306085 MGAT4BQ9UQ53 548 aa12.89□□□□□ -0.35
TRIM56-201ENST00000306085 A2ML1A8K2U0 1454 aa12.89□□□□□ -0.35
TRIM56-201ENST00000306085 UNC13BO14795 1591 aa12.89□□□□□ -0.35
TRIM56-201ENST00000306085 K7EPI3 171 aa12.89□□□□□ -0.35
TRIM56-201ENST00000306085 PRKCGP05129 697 aa12.89□□□□□ -0.35
TRIM56-201ENST00000306085 HEXBP07686 556 aa12.89□□□□□ -0.35
TRIM56-201ENST00000306085 LRFN4Q6PJG9 635 aa12.89□□□□□ -0.35
TRIM56-201ENST00000306085 LIX1LQ8IVB5 337 aa12.89□□□□□ -0.35
TRIM56-201ENST00000306085 SLC25A51Q9H1U9 297 aa12.89□□□□□ -0.35
TRIM56-201ENST00000306085 FAM86C1Q9NVL1 165 aa12.89□□□□□ -0.35
TRIM56-201ENST00000306085 GMEB2Q9UKD1 530 aa12.89□□□□□ -0.35
TRIM56-201ENST00000306085 A0A087WUU8 490 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 ESR1P03372 595 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 FHP07954 510 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 MEX3BQ6ZN04 569 aaKnown RBP12.88□□□□□ -0.35
TRIM56-201ENST00000306085 PKP2Q99959 881 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 SLC38A1Q9H2H9 487 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 SLC28A3Q9HAS3 691 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 LRP5LA4QPB2 252 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 C2orf78A6NCI8 922 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 PNPP00491 289 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 RHCEP18577 417 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 FIGNL1Q6PIW4 674 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 CAMKVQ8NCB2 501 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 LIPHQ8WWY8 451 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 PLAGL1Q9UM63 463 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 CBR1P16152 277 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 GLUD2P49448 558 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 KCNC4Q03721 635 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 UNQ6126/PRO20091Q6UXV3 157 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 DPPA2Q7Z7J5 298 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 PDSS2Q86YH6 399 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 UEVLDQ8IX04 471 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 RDH10Q8IZV5 341 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 CNIH3Q8TBE1 160 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 HPSE2Q8WWQ2 592 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 ALG3Q92685 438 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 P2RX7Q99572 595 aaKnown RBP12.88□□□□□ -0.35
TRIM56-201ENST00000306085 CGREF1Q99674 301 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 RBCK1Q9BYM8 510 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 TCEAL2Q9H3H9 227 aaPredicted RBP12.88□□□□□ -0.35
TRIM56-201ENST00000306085 FADS1O60427 444 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 ZNF182P17025 639 aaPredicted RBP12.88□□□□□ -0.35
TRIM56-201ENST00000306085 ZNF679Q8IYX0 411 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 TM9SF4Q92544 642 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 EBF4Q9BQW3 602 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 ABCG5Q9H222 651 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 FOLH1BQ9HBA9 442 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 CRTAPO75718 401 aaPredicted RBP12.88□□□□□ -0.35
TRIM56-201ENST00000306085 PFKLP17858 780 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 PRKACGP22612 351 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 C2orf27AQ580R0 203 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 ZSWIM9Q86XI8 627 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 PACRGLQ8N7B6 248 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 GATSQ8NAP1 163 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 TOMM40LQ969M1 308 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 NELL2Q99435 816 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 SDHAF2Q9NX18 166 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 TAC3Q9UHF0 121 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 BPIP17213 487 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 PAX6P26367 422 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 CD6P30203 668 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 ACTBP60709 375 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 ACTG1P63261 375 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 CAPSQ13938 189 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 FAM46BQ96A09 425 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 APMAPQ9HDC9 416 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 C19orf25Q9UFG5 118 aaPredicted RBP12.88□□□□□ -0.35
TRIM56-201ENST00000306085 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.88□□□□□ -0.35
TRIM56-201ENST00000306085 NEO1Q92859 1461 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 PCSK2P16519 638 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 CASP6P55212 293 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 ACTA2P62736 377 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 ACTG2P63267 376 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 SFRP5Q5T4F7 317 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 CNN2Q99439 309 aaKnown RBP12.88□□□□□ -0.35
TRIM56-201ENST00000306085 ZNF891A8MT65 544 aaPredicted RBP12.88□□□□□ -0.35
TRIM56-201ENST00000306085 BAGE3Q86Y29 109 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 BAGE2Q86Y30 109 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 TOP6BLQ8N6T0 577 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 THAP3Q8WTV1 239 aaPredicted RBP12.88□□□□□ -0.35
TRIM56-201ENST00000306085 POLMQ9NP87 494 aaPredicted RBP12.88□□□□□ -0.35
TRIM56-201ENST00000306085 IGSF9Q9P2J2 1179 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 SARDHQ9UL12 918 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 NEMP2A6NFY4 417 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 F5H5P2 479 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 PIM1P11309 404 aaPredicted RBP12.88□□□□□ -0.35
TRIM56-201ENST00000306085 PRKCIP41743 596 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 C1orf52Q8N6N3 182 aaKnown RBP12.88□□□□□ -0.35
TRIM56-201ENST00000306085 PLD5Q8N7P1 536 aa12.88□□□□□ -0.35
TRIM56-201ENST00000306085 RCCD1A6NED2 376 aa12.87□□□□□ -0.35
TRIM56-201ENST00000306085 KITLGP21583 273 aa12.87□□□□□ -0.35
TRIM56-201ENST00000306085 COQ5Q5HYK3 327 aa12.87□□□□□ -0.35
TRIM56-201ENST00000306085 WDR45BQ5MNZ6 344 aa12.87□□□□□ -0.35
TRIM56-201ENST00000306085 C3P1Q6ZMU1 363 aa12.87□□□□□ -0.35
TRIM56-201ENST00000306085 AQP12AQ8IXF9 295 aa12.87□□□□□ -0.35
TRIM56-201ENST00000306085 OR2T33Q8NG76 320 aa12.87□□□□□ -0.35
TRIM56-201ENST00000306085 SMIM3Q9BZL3 60 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms