RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 BMP4P12644 408 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 NME1P15531 152 aaKnown RBP8.8□□□□□ -1
PTPRE-202ENST00000306042 VASPP50552 380 aaPredicted RBP8.8□□□□□ -1
PTPRE-202ENST00000306042 XIAPP98170 497 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 ST3GAL3Q11203 375 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.8□□□□□ -1
PTPRE-202ENST00000306042 ZCCHC12Q6PEW1 402 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 FIGNL1Q6PIW4 674 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 FAM156AQ8NDB6 213 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 OR2AJ1Q8NGZ0 328 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 GTPBP3Q969Y2 492 aaKnown RBP8.8□□□□□ -1
PTPRE-202ENST00000306042 MTERF3Q96E29 417 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 APIPQ96GX9 242 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 OR1F2PQ96R84 312 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 GEMIN8Q9NWZ8 242 aaKnown RBP8.8□□□□□ -1
PTPRE-202ENST00000306042 EHD3Q9NZN3 535 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 RGS5O15539 181 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 TPD52L2O43399 206 aaKnown RBP8.8□□□□□ -1
PTPRE-202ENST00000306042 HCN1O60741 890 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 POU2F1P14859 743 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 CD46P15529 392 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 PKLRP30613 574 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 CLDN8P56748 225 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 CD47Q08722 323 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 CAMK1Q14012 370 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 C6orf132Q5T0Z8 1188 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 TMEM225Q6GV28 225 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 ZNF551Q7Z340 670 aaPredicted RBP8.8□□□□□ -1
PTPRE-202ENST00000306042 VRK3Q8IV63 474 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 C10orf82Q8WW14 230 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 NTMT1Q9BV86 223 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 TEX101Q9BY14 249 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 TRIM2Q9C040 744 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 S1PR5Q9H228 398 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 OR51I1Q9H343 314 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 TIMMDC1Q9NPL8 285 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 ERVK-19Q9WJR5 959 aa8.8□□□□□ -1
PTPRE-202ENST00000306042 PARP14Q460N5 1801 aa8.79□□□□□ -1
PTPRE-202ENST00000306042 ATG2BQ96BY7 2078 aa8.79□□□□□ -1
PTPRE-202ENST00000306042 SDHDO14521 159 aa8.79□□□□□ -1
PTPRE-202ENST00000306042 ZNF749O43361 778 aa8.79□□□□□ -1
PTPRE-202ENST00000306042 STX11O75558 287 aa8.79□□□□□ -1
PTPRE-202ENST00000306042 BMP1P13497 986 aa8.79□□□□□ -1
PTPRE-202ENST00000306042 FADDQ13158 208 aa8.79□□□□□ -1
PTPRE-202ENST00000306042 GARNL3Q5VVW2 1013 aa8.79□□□□□ -1
PTPRE-202ENST00000306042 KANK2Q63ZY3 851 aa8.79□□□□□ -1
PTPRE-202ENST00000306042 FAM217AQ8IXS0 508 aa8.79□□□□□ -1
PTPRE-202ENST00000306042 BPIFB6Q8NFQ5 453 aa8.79□□□□□ -1
PTPRE-202ENST00000306042 RORBQ92753 470 aa8.79□□□□□ -1
PTPRE-202ENST00000306042 CLPTM1LQ96KA5 538 aa8.79□□□□□ -1
PTPRE-202ENST00000306042 CCNL2Q96S94 520 aaPredicted RBP8.79□□□□□ -1
PTPRE-202ENST00000306042 LRRC61Q9BV99 259 aa8.79□□□□□ -1
PTPRE-202ENST00000306042 ZBTB26Q9HCK0 441 aa8.79□□□□□ -1
PTPRE-202ENST00000306042 ERGIC3Q9Y282 383 aa8.79□□□□□ -1
PTPRE-202ENST00000306042 MAN2B2Q9Y2E5 1009 aa8.79□□□□□ -1
PTPRE-202ENST00000306042 CNTRLQ7Z7A1 2325 aa8.79□□□□□ -1
PTPRE-202ENST00000306042 TRBV11-1A0A0K0K1C0 115 aa8.79□□□□□ -1
PTPRE-202ENST00000306042 SEC14L5O43304 696 aa8.79□□□□□ -1
PTPRE-202ENST00000306042 PSIP1O75475 530 aaKnown RBP8.79□□□□□ -1
PTPRE-202ENST00000306042 RPS17P08708 135 aaKnown RBP8.79□□□□□ -1
PTPRE-202ENST00000306042 IGFBP5P24593 272 aa8.79□□□□□ -1
PTPRE-202ENST00000306042 ATP4BP51164 291 aa8.79□□□□□ -1
PTPRE-202ENST00000306042 FOXK1P85037 733 aa8.79□□□□□ -1
PTPRE-202ENST00000306042 PCDH1Q08174 1060 aa8.79□□□□□ -1
PTPRE-202ENST00000306042 GALNT1Q10472 559 aaPredicted RBP8.79□□□□□ -1
PTPRE-202ENST00000306042 ERV3-1Q14264 604 aa8.79□□□□□ -1
PTPRE-202ENST00000306042 DHRS13Q6UX07 377 aa8.79□□□□□ -1
PTPRE-202ENST00000306042 FAM81AQ8TBF8 368 aa8.79□□□□□ -1
PTPRE-202ENST00000306042 ECHDC3Q96DC8 303 aa8.79□□□□□ -1
PTPRE-202ENST00000306042 RNFT2Q96EX2 444 aa8.79□□□□□ -1
PTPRE-202ENST00000306042 SH3GL3Q99963 347 aa8.79□□□□□ -1
PTPRE-202ENST00000306042 SLC39A3Q9BRY0 314 aa8.79□□□□□ -1
PTPRE-202ENST00000306042 DOHHQ9BU89 302 aa8.79□□□□□ -1
PTPRE-202ENST00000306042 ATP13A2Q9NQ11 1180 aa8.79□□□□□ -1
PTPRE-202ENST00000306042 MED31Q9Y3C7 131 aa8.79□□□□□ -1
PTPRE-202ENST00000306042 OR51B4Q9Y5P0 310 aa8.79□□□□□ -1
PTPRE-202ENST00000306042 HAT1O14929 419 aa8.79□□□□□ -1
PTPRE-202ENST00000306042 CSO75390 466 aaKnown RBP8.79□□□□□ -1
PTPRE-202ENST00000306042 MAT1AQ00266 395 aaKnown RBP8.79□□□□□ -1
PTPRE-202ENST00000306042 OPN5Q6U736 354 aa8.79□□□□□ -1
PTPRE-202ENST00000306042 GALNT5Q7Z7M9 940 aa8.79□□□□□ -1
PTPRE-202ENST00000306042 GPAT4Q86UL3 456 aa8.79□□□□□ -1
PTPRE-202ENST00000306042 ZNF595Q8IYB9 648 aa8.79□□□□□ -1
PTPRE-202ENST00000306042 NLGN4XQ8N0W4 816 aa8.79□□□□□ -1
PTPRE-202ENST00000306042 TOR1AIP2Q8NFQ8 470 aa8.79□□□□□ -1
PTPRE-202ENST00000306042 IPCEF1Q8WWN9 437 aaPredicted RBP8.79□□□□□ -1
PTPRE-202ENST00000306042 HOXD1Q9GZZ0 328 aa8.79□□□□□ -1
PTPRE-202ENST00000306042 MEAF6Q9HAF1 191 aa8.79□□□□□ -1
PTPRE-202ENST00000306042 GREB1LQ9C091 1923 aaPredicted RBP8.79□□□□□ -1
PTPRE-202ENST00000306042 CCDC187A0A096LP49 1063 aa8.79□□□□□ -1
PTPRE-202ENST00000306042 A0A1B0GX78 115 aa8.79□□□□□ -1
PTPRE-202ENST00000306042 SHOX2O60902 331 aaPredicted RBP8.79□□□□□ -1
PTPRE-202ENST00000306042 TRIM3O75382 744 aaPredicted RBP8.79□□□□□ -1
PTPRE-202ENST00000306042 NPPAP01160 153 aa8.79□□□□□ -1
PTPRE-202ENST00000306042 H1F0P07305 194 aaKnown RBP8.79□□□□□ -1
PTPRE-202ENST00000306042 SOX6P35712 828 aa8.79□□□□□ -1
PTPRE-202ENST00000306042 CCL11P51671 97 aa8.79□□□□□ -1
PTPRE-202ENST00000306042 TRIP6Q15654 476 aaKnown RBP8.79□□□□□ -1
PTPRE-202ENST00000306042 ZNF483Q8TF39 744 aaPredicted RBP8.79□□□□□ -1
PTPRE-202ENST00000306042 ATOH8Q96SQ7 321 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms