RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 GUCY1B2O75343 617 aa24.53■■□□□ 1.52
CDKN2A-201ENST00000304494 OR4F21O95013 312 aa24.53■■□□□ 1.52
CDKN2A-201ENST00000304494 GALNSP34059 522 aa24.53■■□□□ 1.52
CDKN2A-201ENST00000304494 MEOX1P50221 254 aa24.53■■□□□ 1.52
CDKN2A-201ENST00000304494 SPRED3Q2MJR0 410 aa24.53■■□□□ 1.52
CDKN2A-201ENST00000304494 CCNYL2Q5T2Q4 361 aa24.53■■□□□ 1.52
CDKN2A-201ENST00000304494 SULF2Q8IWU5 870 aa24.53■■□□□ 1.52
CDKN2A-201ENST00000304494 L3HYPDHQ96EM0 354 aa24.53■■□□□ 1.52
CDKN2A-201ENST00000304494 MAGED4Q96JG8 741 aa24.53■■□□□ 1.52
CDKN2A-201ENST00000304494 ZNF382Q96SR6 550 aa24.53■■□□□ 1.52
CDKN2A-201ENST00000304494 TSPAN10Q9H1Z9 355 aaPredicted RBP24.53■■□□□ 1.52
CDKN2A-201ENST00000304494 FARSBQ9NSD9 589 aaKnown RBP24.53■■□□□ 1.52
CDKN2A-201ENST00000304494 OR6B1O95007 311 aa24.52■■□□□ 1.52
CDKN2A-201ENST00000304494 KRT6AP02538 564 aa24.52■■□□□ 1.52
CDKN2A-201ENST00000304494 KRT6BP04259 564 aa24.52■■□□□ 1.52
CDKN2A-201ENST00000304494 SHBGP04278 402 aa24.52■■□□□ 1.52
CDKN2A-201ENST00000304494 IGKV3-11P04433 115 aa24.52■■□□□ 1.52
CDKN2A-201ENST00000304494 KRT6CP48668 564 aa24.52■■□□□ 1.52
CDKN2A-201ENST00000304494 IL20RBQ6UXL0 311 aa24.52■■□□□ 1.52
CDKN2A-201ENST00000304494 GPRIN3Q6ZVF9 776 aa24.52■■□□□ 1.52
CDKN2A-201ENST00000304494 MDGA2Q7Z553 956 aa24.52■■□□□ 1.52
CDKN2A-201ENST00000304494 TDRPQ86YL5 185 aa24.52■■□□□ 1.52
CDKN2A-201ENST00000304494 SIAH3Q8IW03 269 aa24.52■■□□□ 1.52
CDKN2A-201ENST00000304494 NUBPLQ8TB37 319 aa24.52■■□□□ 1.52
CDKN2A-201ENST00000304494 RIT1Q92963 219 aa24.52■■□□□ 1.52
CDKN2A-201ENST00000304494 CCDC126Q96EE4 140 aa24.52■■□□□ 1.52
CDKN2A-201ENST00000304494 ZNF225Q9UK10 706 aa24.52■■□□□ 1.52
CDKN2A-201ENST00000304494 A0A1W2PPM1 405 aa24.51■■□□□ 1.51
CDKN2A-201ENST00000304494 ASNA1O43681 348 aa24.51■■□□□ 1.51
CDKN2A-201ENST00000304494 SLC19A2O60779 497 aa24.51■■□□□ 1.51
CDKN2A-201ENST00000304494 SLC35E2P0CK97 266 aa24.51■■□□□ 1.51
CDKN2A-201ENST00000304494 HSD3B1P14060 373 aa24.51■■□□□ 1.51
CDKN2A-201ENST00000304494 KRT15P19012 456 aa24.51■■□□□ 1.51
CDKN2A-201ENST00000304494 HSD3B2P26439 372 aa24.51■■□□□ 1.51
CDKN2A-201ENST00000304494 PIK3R1P27986 724 aa24.51■■□□□ 1.51
CDKN2A-201ENST00000304494 SOX3P41225 446 aa24.51■■□□□ 1.51
CDKN2A-201ENST00000304494 MAPK12P53778 367 aa24.51■■□□□ 1.51
CDKN2A-201ENST00000304494 MPEG1Q2M385 716 aa24.51■■□□□ 1.51
CDKN2A-201ENST00000304494 NDUFAF5Q5TEU4 345 aa24.51■■□□□ 1.51
CDKN2A-201ENST00000304494 OPN5Q6U736 354 aa24.51■■□□□ 1.51
CDKN2A-201ENST00000304494 DGAT2L6Q6ZPD8 337 aa24.51■■□□□ 1.51
CDKN2A-201ENST00000304494 COMMD6Q7Z4G1 85 aa24.51■■□□□ 1.51
CDKN2A-201ENST00000304494 GHDCQ8N2G8 530 aa24.51■■□□□ 1.51
CDKN2A-201ENST00000304494 CDYL2Q8N8U2 506 aa24.51■■□□□ 1.51
CDKN2A-201ENST00000304494 PSD4Q8NDX1 1056 aa24.51■■□□□ 1.51
CDKN2A-201ENST00000304494 SREK1Q8WXA9 508 aaKnown RBP24.51■■□□□ 1.51
CDKN2A-201ENST00000304494 CNPPD1Q9BV87 410 aa24.51■■□□□ 1.51
CDKN2A-201ENST00000304494 TEX10Q9NXF1 929 aaPredicted RBP24.51■■□□□ 1.51
CDKN2A-201ENST00000304494 SUCOQ9UBS9 1254 aaKnown RBP24.51■■□□□ 1.51
CDKN2A-201ENST00000304494 SVILO95425 2214 aa24.5■■□□□ 1.51
CDKN2A-201ENST00000304494 CYSRT1A8MQ03 144 aa24.5■■□□□ 1.51
CDKN2A-201ENST00000304494 WISP2O76076 250 aa24.5■■□□□ 1.51
CDKN2A-201ENST00000304494 CLDN1O95832 211 aa24.5■■□□□ 1.51
CDKN2A-201ENST00000304494 CA7P43166 264 aa24.5■■□□□ 1.51
CDKN2A-201ENST00000304494 SLCO1A2P46721 670 aa24.5■■□□□ 1.51
CDKN2A-201ENST00000304494 CCT5P48643 541 aa24.5■■□□□ 1.51
CDKN2A-201ENST00000304494 LCP2Q13094 533 aa24.5■■□□□ 1.51
CDKN2A-201ENST00000304494 MTFR2Q6P444 385 aa24.5■■□□□ 1.51
CDKN2A-201ENST00000304494 BNC2Q6ZN30 1099 aaPredicted RBP24.5■■□□□ 1.51
CDKN2A-201ENST00000304494 RTL4Q6ZR62 310 aa24.5■■□□□ 1.51
CDKN2A-201ENST00000304494 OR4K14Q8NGD5 310 aa24.5■■□□□ 1.51
CDKN2A-201ENST00000304494 RYDENQ9NUL5 291 aaKnown RBP24.5■■□□□ 1.51
CDKN2A-201ENST00000304494 VPS29Q9UBQ0 182 aa24.5■■□□□ 1.51
CDKN2A-201ENST00000304494 SPTAN1Q13813 2472 aaKnown RBP24.5■■□□□ 1.51
CDKN2A-201ENST00000304494 ZGRF1Q86YA3 2104 aa24.49■■□□□ 1.51
CDKN2A-201ENST00000304494 DOPEY1Q5JWR5 2465 aa24.49■■□□□ 1.51
CDKN2A-201ENST00000304494 CCDC151A5D8V7 595 aa24.49■■□□□ 1.51
CDKN2A-201ENST00000304494 WASHC1A8K0Z3 465 aa24.49■■□□□ 1.51
CDKN2A-201ENST00000304494 MANBAO00462 879 aa24.49■■□□□ 1.51
CDKN2A-201ENST00000304494 TFECO14948 347 aaPredicted RBP24.49■■□□□ 1.51
CDKN2A-201ENST00000304494 PGRMC2O15173 223 aa24.49■■□□□ 1.51
CDKN2A-201ENST00000304494 MYL2P10916 166 aa24.49■■□□□ 1.51
CDKN2A-201ENST00000304494 HMOX2P30519 316 aa24.49■■□□□ 1.51
CDKN2A-201ENST00000304494 PKNOX1P55347 436 aa24.49■■□□□ 1.51
CDKN2A-201ENST00000304494 ERVK-8P63133 956 aa24.49■■□□□ 1.51
CDKN2A-201ENST00000304494 TBL3Q12788 808 aaKnown RBP24.49■■□□□ 1.51
CDKN2A-201ENST00000304494 CSTF3Q12996 717 aaKnown RBP24.49■■□□□ 1.51
CDKN2A-201ENST00000304494 ZNF267Q14586 743 aaPredicted RBP24.49■■□□□ 1.51
CDKN2A-201ENST00000304494 CCDC153Q494R4 210 aa24.49■■□□□ 1.51
CDKN2A-201ENST00000304494 RNF111Q6ZNA4 994 aa24.49■■□□□ 1.51
CDKN2A-201ENST00000304494 SLC29A4Q7RTT9 530 aa24.49■■□□□ 1.51
CDKN2A-201ENST00000304494 C9orf40Q8IXQ3 194 aa24.49■■□□□ 1.51
CDKN2A-201ENST00000304494 ZFP62Q8NB50 900 aaPredicted RBP24.49■■□□□ 1.51
CDKN2A-201ENST00000304494 GOLM1Q8NBJ4 401 aa24.49■■□□□ 1.51
CDKN2A-201ENST00000304494 C16orf52Q8NHV5 167 aa24.49■■□□□ 1.51
CDKN2A-201ENST00000304494 METTL6Q8TCB7 284 aa24.49■■□□□ 1.51
CDKN2A-201ENST00000304494 SLC22A8Q8TCC7 542 aa24.49■■□□□ 1.51
CDKN2A-201ENST00000304494 SGCZQ96LD1 299 aa24.49■■□□□ 1.51
CDKN2A-201ENST00000304494 GRID1Q9ULK0 1009 aa24.49■■□□□ 1.51
CDKN2A-201ENST00000304494 ERVK-19Q9WJR5 959 aa24.49■■□□□ 1.51
CDKN2A-201ENST00000304494 SMIM23A6NLE4 172 aa24.48■■□□□ 1.51
CDKN2A-201ENST00000304494 OR6C76A6NM76 312 aa24.48■■□□□ 1.51
CDKN2A-201ENST00000304494 HRKO00198 91 aa24.48■■□□□ 1.51
CDKN2A-201ENST00000304494 CCL21O00585 134 aa24.48■■□□□ 1.51
CDKN2A-201ENST00000304494 ZG16O60844 167 aa24.48■■□□□ 1.51
CDKN2A-201ENST00000304494 ULK1O75385 1050 aa24.48■■□□□ 1.51
CDKN2A-201ENST00000304494 ENO1P06733 434 aaKnown RBP24.48■■□□□ 1.51
CDKN2A-201ENST00000304494 GPR85P60893 370 aa24.48■■□□□ 1.51
CDKN2A-201ENST00000304494 NAA20P61599 178 aa24.48■■□□□ 1.51
CDKN2A-201ENST00000304494 GALNT1Q10472 559 aaPredicted RBP24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms